RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 NUDT5Q9UKK9 219 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 RWDD3Q9Y3V2 267 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 TIMM13Q9Y5L4 95 aaPredicted RBP6.49□□□□□ -1.37
CHD9-210ENST00000564582 SSH2Q76I76 1423 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 ASXL2Q76L83 1435 aa6.49□□□□□ -1.37
CHD9-210ENST00000564582 PLB1Q6P1J6 1458 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 MAGI2Q86UL8 1455 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 NFIBO00712 420 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 PRODHO43272 600 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 CAPNS1P04632 268 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 APPP05067 770 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 TMEM253P0C7T8 217 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 SDHBP21912 280 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 GRIA2P42262 883 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 YBX1P67809 324 aaKnown RBP6.48□□□□□ -1.37
CHD9-210ENST00000564582 MESP2Q0VG99 397 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 TRDNQ13061 729 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 TESK1Q15569 626 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 PRSS53Q2L4Q9 553 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 SLC35F1Q5T1Q4 408 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 ZNF648Q5T619 568 aaPredicted RBP6.48□□□□□ -1.37
CHD9-210ENST00000564582 SYDE1Q6ZW31 735 aaPredicted RBP6.48□□□□□ -1.37
CHD9-210ENST00000564582 RPAP2Q8IXW5 612 aaPredicted RBP6.48□□□□□ -1.37
CHD9-210ENST00000564582 TCP11L2Q8N4U5 519 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 MSL3Q8N5Y2 521 aaKnown RBP6.48□□□□□ -1.37
CHD9-210ENST00000564582 GPT2Q8TD30 523 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 KIF1BPQ96EK5 621 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 MYCBPQ99417 103 aaPredicted RBP6.48□□□□□ -1.37
CHD9-210ENST00000564582 CDC6Q99741 560 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 API5Q9BZZ5 524 aaKnown RBP6.48□□□□□ -1.37
CHD9-210ENST00000564582 ARHGEF4Q9NR80 690 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 SIRT5Q9NXA8 310 aa6.48□□□□□ -1.37
CHD9-210ENST00000564582 CFAP65Q6ZU64 1925 aaKnown RBP6.48□□□□□ -1.37
CHD9-210ENST00000564582 KIAA1210Q9ULL0 1709 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 CLTCL1P53675 1640 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 RNF17Q9BXT8 1623 aaKnown RBP6.47□□□□□ -1.37
CHD9-210ENST00000564582 PIK3R4Q99570 1358 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 TEX51A0A1B0GUA7 166 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 ERC2O15083 957 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 HMMRO75330 724 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 DBHP09172 617 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 PABPC1P11940 636 aaKnown RBP6.47□□□□□ -1.37
CHD9-210ENST00000564582 GSDMDP57764 484 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 SRSF3P84103 164 aaKnown RBP6.47□□□□□ -1.37
CHD9-210ENST00000564582 CYP4F3Q08477 520 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 CBX2Q14781 532 aaPredicted RBP6.47□□□□□ -1.37
CHD9-210ENST00000564582 LONRF2Q1L5Z9 754 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 ZC3H12BQ5HYM0 836 aaKnown RBP6.47□□□□□ -1.37
CHD9-210ENST00000564582 ZC3H14Q6PJT7 736 aaKnown RBP6.47□□□□□ -1.37
CHD9-210ENST00000564582 CCDC91Q7Z6B0 441 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 NETO2Q8NC67 525 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 KREMEN2Q8NCW0 462 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 KCNN1Q92952 543 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 CHMP4CQ96CF2 233 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 MCOLN1Q9GZU1 580 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 BTG4Q9NY30 223 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 MARCH2Q9P0N8 246 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 TTC37Q6PGP7 1564 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 SPAG9O60271 1321 aaKnown RBP6.47□□□□□ -1.37
CHD9-210ENST00000564582 A2MP01023 1474 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 RAPGEF6Q8TEU7 1601 aa6.47□□□□□ -1.37
CHD9-210ENST00000564582 DUOX2Q9NRD8 1548 aa6.46□□□□□ -1.37
CHD9-210ENST00000564582 A0A1B0GUL7 405 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 A6NNZ2 444 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 DLX3O60479 287 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 FUCA1P04066 466 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 GLI4P10075 376 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 TNNT1P13805 278 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 TRIM27P14373 513 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 U2AF2P26368 475 aaKnown RBP eCLIP6.46□□□□□ -1.38
CHD9-210ENST00000564582 MAPKAPK2P49137 400 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 GTF2A1P52655 376 aaPredicted RBP6.46□□□□□ -1.38
CHD9-210ENST00000564582 NCBP1Q09161 790 aaKnown RBP6.46□□□□□ -1.38
CHD9-210ENST00000564582 INF2Q27J81 1249 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 TUBB8Q3ZCM7 444 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 ANKRD45Q5TZF3 282 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 MBLAC2Q68D91 279 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 PPIP5K1Q6PFW1 1433 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 RPTNQ6XPR3 784 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 USP53Q70EK8 1073 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 MORC1Q86VD1 984 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 IQUBQ8NA54 791 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 ZBTB38Q8NAP3 1195 aaPredicted RBP6.46□□□□□ -1.38
CHD9-210ENST00000564582 GOLGA5Q8TBA6 731 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 DCAF4Q8WV16 495 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 C1orf159Q96HA4 380 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 MRFAP1L1Q96HT8 127 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 CHAMP1Q96JM3 812 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 ZNF830Q96NB3 372 aaPredicted RBP6.46□□□□□ -1.38
CHD9-210ENST00000564582 NCAPGQ9BPX3 1015 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 CFAP74Q9C0B2 1584 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 KLHL14Q9P2G3 628 aa6.46□□□□□ -1.38
CHD9-210ENST00000564582 KDM5AP29375 1690 aaKnown RBP6.45□□□□□ -1.38
CHD9-210ENST00000564582 PBRM1Q86U86 1689 aa6.45□□□□□ -1.38
CHD9-210ENST00000564582 MAST1Q9Y2H9 1570 aa6.45□□□□□ -1.38
CHD9-210ENST00000564582 FAM221BA6H8Z2 402 aa6.45□□□□□ -1.38
CHD9-210ENST00000564582 TCAF2A6NFQ2 919 aa6.45□□□□□ -1.38
CHD9-210ENST00000564582 CTAGE5O15320 804 aa6.45□□□□□ -1.38
CHD9-210ENST00000564582 SLU7O95391 586 aaKnown RBP6.45□□□□□ -1.38
CHD9-210ENST00000564582 TSPAN15O95858 294 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms