RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 FNTAP49354 379 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 SMTNP53814 917 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 PSMD2Q13200 908 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 PRKG1Q13976 671 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 MIER3Q7Z3K6 550 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 SNX12Q9UMY4 172 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 TACC3Q9Y6A5 838 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 AFDNP55196 1824 aaKnown RBP11.4□□□□□ -0.58
RNF40-204ENST00000563683 NPHP3-ACAD11A0A0J9YXS1 232 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 F5H6K3 240 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 MYO1FO00160 1098 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 KRIT1O00522 736 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 LRRN2O75325 713 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 KLRC3Q07444 240 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 BIRC3Q13489 604 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 GLE1Q53GS7 698 aaKnown RBP11.4□□□□□ -0.58
RNF40-204ENST00000563683 KDM7AQ6ZMT4 941 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 BARGINQ6ZT62 677 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 C16orf86Q6ZW13 317 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 USP37Q86T82 979 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 SELENOSQ9BQE4 189 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 DHX36Q9H2U1 1008 aaKnown RBP11.4□□□□□ -0.58
RNF40-204ENST00000563683 KLC4Q9NSK0 619 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 STIM2Q9P246 746 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 TESPA1A2RU30 521 aaPredicted RBP11.4□□□□□ -0.58
RNF40-204ENST00000563683 CTNNA2P26232 953 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 ARHGAP4P98171 946 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 MAP2K1Q02750 393 aaPredicted RBP11.4□□□□□ -0.58
RNF40-204ENST00000563683 GRIK5Q16478 980 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 SYDE2Q5VT97 1194 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 CC2D2BQ6DHV5 1058 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 PDXDC2PQ6P474 469 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 NFRKBQ6P4R8 1299 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 GUF1Q8N442 669 aaKnown RBP11.4□□□□□ -0.58
RNF40-204ENST00000563683 PLVAPQ9BX97 442 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 DPH5Q9H2P9 285 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 ACTR5Q9H9F9 607 aaPredicted RBP11.4□□□□□ -0.58
RNF40-204ENST00000563683 ATP6V0A2Q9Y487 856 aa11.4□□□□□ -0.58
RNF40-204ENST00000563683 NID2Q14112 1375 aa11.4□□□□□ -0.59
RNF40-204ENST00000563683 GFPT2O94808 682 aa11.4□□□□□ -0.59
RNF40-204ENST00000563683 AFPP02771 609 aaKnown RBP11.4□□□□□ -0.59
RNF40-204ENST00000563683 NPR1P16066 1061 aa11.4□□□□□ -0.59
RNF40-204ENST00000563683 TNFRSF8P28908 595 aa11.4□□□□□ -0.59
RNF40-204ENST00000563683 MEA1Q16626 185 aa11.4□□□□□ -0.59
RNF40-204ENST00000563683 CEP85LQ5SZL2 805 aa11.4□□□□□ -0.59
RNF40-204ENST00000563683 FAM83BQ5T0W9 1011 aa11.4□□□□□ -0.59
RNF40-204ENST00000563683 ZNF572Q7Z3I7 529 aaPredicted RBP11.4□□□□□ -0.59
RNF40-204ENST00000563683 TMC4Q7Z404 712 aa11.4□□□□□ -0.59
RNF40-204ENST00000563683 ARFGAP2Q8N6H7 521 aa11.4□□□□□ -0.59
RNF40-204ENST00000563683 GJD4Q96KN9 370 aaPredicted RBP11.4□□□□□ -0.59
RNF40-204ENST00000563683 PCIF1Q9H4Z3 704 aa11.4□□□□□ -0.59
RNF40-204ENST00000563683 METTL14Q9HCE5 456 aaKnown RBP11.4□□□□□ -0.59
RNF40-204ENST00000563683 GPR75-ASB3A0A0A6YYF3 556 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 PALM3A6NDB9 673 aaPredicted RBP11.39□□□□□ -0.59
RNF40-204ENST00000563683 SRRM3A6NNA2 597 aaPredicted RBP11.39□□□□□ -0.59
RNF40-204ENST00000563683 K7ENM7 598 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 PDE2AO00408 941 aaPredicted RBP11.39□□□□□ -0.59
RNF40-204ENST00000563683 HEXIM1O94992 359 aaKnown RBP11.39□□□□□ -0.59
RNF40-204ENST00000563683 MYZAPP0CAP1 466 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 ELF1P32519 619 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 NT5C2P49902 561 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 PMS1P54277 932 aaKnown RBP11.39□□□□□ -0.59
RNF40-204ENST00000563683 SFR1Q86XK3 245 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 SPATA4Q8NEY3 305 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 SCLT1Q96NL6 688 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 LRRC1Q9BTT6 524 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 VCPKMTQ9H867 229 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 RASAL2Q9UJF2 1139 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 AMFRQ9UKV5 643 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 SRGNP10124 158 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 LSP1P33241 339 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 ACTN3Q08043 901 aaPredicted RBP11.39□□□□□ -0.59
RNF40-204ENST00000563683 ZNF543Q08ER8 600 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 VPS72Q15906 364 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 FAM186BQ8IYM0 893 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 CCDC155Q8N6L0 562 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 ZNF577Q9BSK1 485 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 LARSQ9P2J5 1176 aaKnown RBP11.39□□□□□ -0.59
RNF40-204ENST00000563683 PACSIN2Q9UNF0 486 aaPredicted RBP11.39□□□□□ -0.59
RNF40-204ENST00000563683 UTP11Q9Y3A2 253 aaKnown RBP11.39□□□□□ -0.59
RNF40-204ENST00000563683 RGPD2P0DJD1 1756 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 AFF2P51816 1311 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 CNTNAP4Q9C0A0 1308 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 STAT2P52630 851 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 KCNH2Q12809 1159 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 PPP1R7Q15435 360 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 PREPLQ4J6C6 727 aaPredicted RBP11.39□□□□□ -0.59
RNF40-204ENST00000563683 RCSD1Q6JBY9 416 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 CCDC121Q6ZUS5 278 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 CPLX4Q7Z7G2 160 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 ARL8AQ96BM9 186 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 GCNT4Q9P109 453 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 MRPL11Q9Y3B7 192 aaKnown RBP11.39□□□□□ -0.59
RNF40-204ENST00000563683 DUSP10Q9Y6W6 482 aa11.39□□□□□ -0.59
RNF40-204ENST00000563683 DDX60Q8IY21 1712 aaKnown RBP11.39□□□□□ -0.59
RNF40-204ENST00000563683 CYTH3O43739 400 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 BCRP11274 1271 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 PPP4CP60510 307 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 TTMPQ5BVD1 217 aa11.38□□□□□ -0.59
RNF40-204ENST00000563683 PPM1KQ8N3J5 372 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms