RNA–Protein interactions for RNA: ENST00000563667.5

PDXDC1-209, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-209ENST00000563667 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.31■□□□□ 0.364e-6■□□□□ 9.4
PDXDC1-209ENST00000563667 BCAS3Q9H6U6 928 aa17.31■□□□□ 0.36
PDXDC1-209ENST00000563667 PDGFCQ9NRA1 345 aa17.31■□□□□ 0.36
PDXDC1-209ENST00000563667 PLXNA1Q9UIW2 1896 aa17.31■□□□□ 0.36
PDXDC1-209ENST00000563667 ZNF236Q9UL36 1845 aa17.31■□□□□ 0.36
PDXDC1-209ENST00000563667 SYNGAP1Q96PV0 1343 aa17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 A0A087WWV3 80 aa17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 SGPL1O95470 568 aa17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 CCNE2O96020 404 aa17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 SSBP05455 408 aaKnown RBP eCLIP17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 PRR29P0C7W0 189 aa17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 SPATA31C1P0DKV0 1188 aa17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 TXNP10599 105 aaKnown RBP17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 PRKAR2AP13861 404 aaKnown RBP17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 ZNF445P59923 1031 aa17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 MCM6Q14566 821 aa17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 TTLL4Q14679 1199 aa17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 POTEGQ6S5H5 508 aa17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 RBM43Q6ZSC3 357 aaKnown RBP17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 SV2BQ7L1I2 683 aa17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 MSL3Q8N5Y2 521 aaKnown RBP17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 BANK1Q8NDB2 785 aa17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 RAD54LQ92698 747 aa17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 MLXIPQ9HAP2 919 aa17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 MAGEF1Q9HAY2 307 aa17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 DDX41Q9UJV9 622 aaKnown RBP17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 ZHX1Q9UKY1 873 aaPredicted RBP17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 DNM3Q9UQ16 869 aa17.3■□□□□ 0.36
PDXDC1-209ENST00000563667 E9PMD0 336 aa17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 SLITRK3O94933 977 aa17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 SMC2O95347 1197 aa17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 ARIH2O95376 493 aa17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 GGPS1O95749 300 aa17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 P4HBP07237 508 aaKnown RBP17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 PSAPP07602 524 aa17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 ACTR2P61160 394 aa17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 MDM2Q00987 491 aaPredicted RBP17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 MFSD14CQ5VZR4 134 aa17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 MIS18BP1Q6P0N0 1132 aa17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 KCNK18Q7Z418 384 aa17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 SH3RF1Q7Z6J0 888 aa17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 DHX37Q8IY37 1157 aaKnown RBP17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 SMAP1Q8IYB5 467 aaPredicted RBP17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 RDM1Q8NG50 284 aa17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 LRRC15Q8TF66 581 aa17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 LARP4BQ92615 738 aaKnown RBP17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 HSD17B14Q9BPX1 270 aa17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 PAK6Q9NQU5 681 aaPredicted RBP17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 BLOC1S4Q9NUP1 217 aa17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 KIAA1468Q9P260 1216 aa17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 PCDHA10Q9Y5I2 948 aa17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 LRRC37A2A6NM11 1700 aa17.29■□□□□ 0.36
PDXDC1-209ENST00000563667 GTPBP6O43824 516 aaPredicted RBP17.28■□□□□ 0.36
PDXDC1-209ENST00000563667 CASP1P29466 404 aa17.28■□□□□ 0.36
PDXDC1-209ENST00000563667 AMPD3Q01432 767 aa17.28■□□□□ 0.36
PDXDC1-209ENST00000563667 ACVR2BQ13705 512 aa17.28■□□□□ 0.36
PDXDC1-209ENST00000563667 OLFML2BQ68BL8 750 aa17.28■□□□□ 0.36
PDXDC1-209ENST00000563667 TAPT1Q6NXT6 567 aa17.28■□□□□ 0.36
PDXDC1-209ENST00000563667 LRSAM1Q6UWE0 723 aa17.28■□□□□ 0.36
PDXDC1-209ENST00000563667 SMARCE1Q969G3 411 aa17.28■□□□□ 0.36
PDXDC1-209ENST00000563667 LXNQ9BS40 222 aa17.28■□□□□ 0.36
PDXDC1-209ENST00000563667 BLZF1Q9H2G9 400 aa17.28■□□□□ 0.36
PDXDC1-209ENST00000563667 ABHD16BQ9H3Z7 469 aa17.28■□□□□ 0.36
PDXDC1-209ENST00000563667 FLRT1Q9NZU1 646 aa17.28■□□□□ 0.36
PDXDC1-209ENST00000563667 PCDHA5Q9Y5H7 936 aa17.28■□□□□ 0.36
PDXDC1-209ENST00000563667 KIAA1217Q5T5P2 1943 aa17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 BIN1O00499 593 aa17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 BACH1O14867 736 aa17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 FARP2O94887 1054 aaPredicted RBP17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 PLA2G4BP0C869 781 aa17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 CCDC192P0DO97 292 aa17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 MUTP22033 750 aa17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 CYP2C19P33261 490 aa17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 ADCYAP1R1P41586 468 aa17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 QARSP47897 775 aaKnown RBP17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 PSMC6P62333 389 aa17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 CACNB2Q08289 660 aaPredicted RBP17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 PRAMEF19Q5SWL8 479 aa17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 CELF3Q5SZQ8 465 aaKnown RBP17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 CCDC62Q6P9F0 684 aa17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 COPS5Q92905 334 aa17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 NACC1Q96RE7 527 aa17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 LRRC27Q9C0I9 530 aa17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 TSPY26PQ9H489 355 aa17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 ZSWIM4Q9H7M6 989 aa17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 KBTBD4Q9NVX7 518 aa17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 GABBR1Q9UBS5 961 aa17.27■□□□□ 0.36
PDXDC1-209ENST00000563667 HTTP42858 3142 aa17.27■□□□□ 0.35
PDXDC1-209ENST00000563667 RBM47A0AV96 593 aaKnown RBP17.26■□□□□ 0.35
PDXDC1-209ENST00000563667 NOP56O00567 594 aaKnown RBP17.26■□□□□ 0.35
PDXDC1-209ENST00000563667 SUPT20HL2P0C7V6 817 aa17.26■□□□□ 0.35
PDXDC1-209ENST00000563667 PSMC5P62195 406 aa17.26■□□□□ 0.35
PDXDC1-209ENST00000563667 TYRO3Q06418 890 aa17.26■□□□□ 0.35
PDXDC1-209ENST00000563667 DPYDQ12882 1025 aa17.26■□□□□ 0.35
PDXDC1-209ENST00000563667 CUL4BQ13620 913 aa17.26■□□□□ 0.35
PDXDC1-209ENST00000563667 PRPF38BQ5VTL8 546 aaKnown RBP17.26■□□□□ 0.35
PDXDC1-209ENST00000563667 ISM2Q6H9L7 571 aa17.26■□□□□ 0.35
PDXDC1-209ENST00000563667 SWSAP1Q6NVH7 229 aa17.26■□□□□ 0.35
PDXDC1-209ENST00000563667 METTL7BQ6UX53 244 aa17.26■□□□□ 0.35
PDXDC1-209ENST00000563667 KCTD17Q8N5Z5 321 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms