RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 RGS16O15492 202 aaPredicted RBP13.89□□□□□ -0.19
CCDC187-201ENST00000563590 CCNE1P24864 410 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 KLRC1P26715 233 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 PLTPP55058 493 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 LACTBP83111 547 aaPredicted RBP13.89□□□□□ -0.19
CCDC187-201ENST00000563590 ITGB3BPQ13352 177 aaPredicted RBP13.89□□□□□ -0.19
CCDC187-201ENST00000563590 TAF11Q15544 211 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 ZYXQ15942 572 aaKnown RBP13.89□□□□□ -0.19
CCDC187-201ENST00000563590 GLE1Q53GS7 698 aaKnown RBP13.89□□□□□ -0.19
CCDC187-201ENST00000563590 FAM43BQ6ZT52 329 aaPredicted RBP13.89□□□□□ -0.19
CCDC187-201ENST00000563590 PEX26Q7Z412 305 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 IQCKQ8N0W5 287 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 RUBCNQ92622 972 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 SCAF8Q9UPN6 1271 aaKnown RBP13.89□□□□□ -0.19
CCDC187-201ENST00000563590 EME2A4GXA9 379 aaPredicted RBP13.89□□□□□ -0.19
CCDC187-201ENST00000563590 RBBP5Q15291 538 aaKnown RBP13.89□□□□□ -0.19
CCDC187-201ENST00000563590 THEMIS2Q5TEJ8 643 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 ARL6IP4Q66PJ3 421 aaKnown RBP13.89□□□□□ -0.19
CCDC187-201ENST00000563590 PNMA1Q8ND90 353 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 CHMP6Q96FZ7 201 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 PACSIN1Q9BY11 444 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 PLAGL2Q9UPG8 496 aa13.89□□□□□ -0.19
CCDC187-201ENST00000563590 UTP11Q9Y3A2 253 aaKnown RBP13.89□□□□□ -0.19
CCDC187-201ENST00000563590 PRLRP16471 622 aa13.88□□□□□ -0.19
CCDC187-201ENST00000563590 SNX1Q13596 522 aa13.88□□□□□ -0.19
CCDC187-201ENST00000563590 DHTKD1Q96HY7 919 aaPredicted RBP13.88□□□□□ -0.19
CCDC187-201ENST00000563590 NOP53Q9NZM5 478 aaKnown RBP13.88□□□□□ -0.19
CCDC187-201ENST00000563590 RPS6KA4O75676 772 aa13.88□□□□□ -0.19
CCDC187-201ENST00000563590 ABCB4P21439 1286 aa13.88□□□□□ -0.19
CCDC187-201ENST00000563590 IRX1P78414 480 aaPredicted RBP13.88□□□□□ -0.19
CCDC187-201ENST00000563590 MXRA7P84157 204 aa13.88□□□□□ -0.19
CCDC187-201ENST00000563590 VWA3BQ502W6 1294 aa13.88□□□□□ -0.19
CCDC187-201ENST00000563590 KLHDC7AQ5VTJ3 777 aa13.88□□□□□ -0.19
CCDC187-201ENST00000563590 CCDC84Q86UT8 332 aaPredicted RBP13.88□□□□□ -0.19
CCDC187-201ENST00000563590 ZNF34Q8IZ26 560 aa13.88□□□□□ -0.19
CCDC187-201ENST00000563590 ERGIC2Q96RQ1 377 aa13.88□□□□□ -0.19
CCDC187-201ENST00000563590 PSMD1Q99460 953 aa13.88□□□□□ -0.19
CCDC187-201ENST00000563590 NYXQ9GZU5 481 aa13.88□□□□□ -0.19
CCDC187-201ENST00000563590 CCDC189A1A4V9 331 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 ATP11AP98196 1134 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 CDK17Q00537 523 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 UBE4AQ14139 1066 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 PPP4R3AQ6IN85 833 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 BLIDQ8IZY5 108 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 PIK3R5Q8WYR1 880 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 COA7Q96BR5 231 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 FAXDC2Q96IV6 333 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 TRIM51Q9BSJ1 452 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 TMBIM4Q9HC24 238 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 MYH13Q9UKX3 1938 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 TTI1O43156 1089 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 SART1O43290 800 aaKnown RBP13.87□□□□□ -0.19
CCDC187-201ENST00000563590 LGR5O75473 907 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 CALM1P0DP23 149 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 CALM2P0DP24 149 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 CALM3P0DP25 149 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 ELF3P78545 371 aaPredicted RBP13.87□□□□□ -0.19
CCDC187-201ENST00000563590 AMPD3Q01432 767 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 CDC37Q16543 378 aaPredicted RBP13.87□□□□□ -0.19
CCDC187-201ENST00000563590 GDAP1Q8TB36 358 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 MXD3Q9BW11 206 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 KBTBD4Q9NVX7 518 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 CNOT8Q9UFF9 292 aaKnown RBP13.87□□□□□ -0.19
CCDC187-201ENST00000563590 A0A1W2PQJ5 194 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 SPDYE3A6NKU9 549 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 CHN1P15882 459 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 ERVK-9P63128 1117 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 GTF2IP78347 998 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 PRMT1Q99873 361 aaKnown RBP13.87□□□□□ -0.19
CCDC187-201ENST00000563590 NSRP1Q9H0G5 558 aaKnown RBP13.87□□□□□ -0.19
CCDC187-201ENST00000563590 ATP6V0A4Q9HBG4 840 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 TSKSQ9UJT2 592 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 MINPP1Q9UNW1 487 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 TNS2Q63HR2 1409 aa13.87□□□□□ -0.19
CCDC187-201ENST00000563590 ATXN2Q99700 1313 aaKnown RBP13.87□□□□□ -0.19
CCDC187-201ENST00000563590 CCT8L1PA6NM43 557 aa13.86□□□□□ -0.19
CCDC187-201ENST00000563590 RXRBP28702 533 aa13.86□□□□□ -0.19
CCDC187-201ENST00000563590 PFKFB3Q16875 520 aaPredicted RBP13.86□□□□□ -0.19
CCDC187-201ENST00000563590 DCAF17Q5H9S7 520 aaPredicted RBP13.86□□□□□ -0.19
CCDC187-201ENST00000563590 ANAPC4Q9UJX5 808 aa13.86□□□□□ -0.19
CCDC187-201ENST00000563590 DDAH1O94760 285 aa13.86□□□□□ -0.19
CCDC187-201ENST00000563590 TNFRSF8P28908 595 aa13.86□□□□□ -0.19
CCDC187-201ENST00000563590 FLT3P36888 993 aa13.86□□□□□ -0.19
CCDC187-201ENST00000563590 ZNF844Q08AG5 666 aa13.86□□□□□ -0.19
CCDC187-201ENST00000563590 ASIC2Q16515 512 aa13.86□□□□□ -0.19
CCDC187-201ENST00000563590 DENND2CQ68D51 928 aa13.86□□□□□ -0.19
CCDC187-201ENST00000563590 SLC17A8Q8NDX2 589 aa13.86□□□□□ -0.19
CCDC187-201ENST00000563590 CCDC26Q8TAB7 109 aa13.86□□□□□ -0.19
CCDC187-201ENST00000563590 GDF3Q9NR23 364 aa13.86□□□□□ -0.19
CCDC187-201ENST00000563590 DNAJC17Q9NVM6 304 aaKnown RBP13.86□□□□□ -0.19
CCDC187-201ENST00000563590 FGFR1OPO95684 399 aaKnown RBP13.86□□□□□ -0.19
CCDC187-201ENST00000563590 CNNM4Q6P4Q7 775 aa13.86□□□□□ -0.19
CCDC187-201ENST00000563590 FAM228AQ86W67 206 aa13.86□□□□□ -0.19
CCDC187-201ENST00000563590 ZCWPW1Q9H0M4 648 aa13.86□□□□□ -0.19
CCDC187-201ENST00000563590 AZI2Q9H6S1 392 aa13.86□□□□□ -0.19
CCDC187-201ENST00000563590 A1CFQ9NQ94 594 aaKnown RBP13.86□□□□□ -0.19
CCDC187-201ENST00000563590 TRPC6Q9Y210 931 aa13.86□□□□□ -0.19
CCDC187-201ENST00000563590 MYH2Q9UKX2 1941 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 TRAPPC3O43617 180 aa13.85□□□□□ -0.19
CCDC187-201ENST00000563590 POLE2P56282 527 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms