RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 OXER1Q8TDS5 423 aa16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 TBCKQ8TEA7 893 aa16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 GUCD1Q96NT3 240 aa16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 SMARCAD1Q9H4L7 1026 aa16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 ERAP1Q9NZ08 941 aa16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 ZNF215Q9UL58 517 aaPredicted RBP16.83■□□□□ 0.28
RPUSD1-204ENST00000563560 NRCAMQ92823 1304 aa16.82■□□□□ 0.28
RPUSD1-204ENST00000563560 ZBTB42B2RXF5 422 aa16.82■□□□□ 0.28
RPUSD1-204ENST00000563560 JAK2O60674 1132 aa16.82■□□□□ 0.28
RPUSD1-204ENST00000563560 PBX2P40425 430 aa16.82■□□□□ 0.28
RPUSD1-204ENST00000563560 PLCB4Q15147 1175 aa16.82■□□□□ 0.28
RPUSD1-204ENST00000563560 FAM26DQ5JW98 314 aa16.82■□□□□ 0.28
RPUSD1-204ENST00000563560 RUFY4Q6ZNE9 571 aa16.82■□□□□ 0.28
RPUSD1-204ENST00000563560 CCDC60Q8IWA6 550 aaPredicted RBP16.82■□□□□ 0.28
RPUSD1-204ENST00000563560 DEFB123Q8N688 67 aa16.82■□□□□ 0.28
RPUSD1-204ENST00000563560 SLC5A5Q92911 643 aa16.82■□□□□ 0.28
RPUSD1-204ENST00000563560 ATP6V0A1Q93050 837 aa16.82■□□□□ 0.28
RPUSD1-204ENST00000563560 SDF4Q9BRK5 362 aa16.82■□□□□ 0.28
RPUSD1-204ENST00000563560 PBX4Q9BYU1 374 aa16.82■□□□□ 0.28
RPUSD1-204ENST00000563560 NOD1Q9Y239 953 aa16.82■□□□□ 0.28
RPUSD1-204ENST00000563560 TDP2O95551 362 aa16.81■□□□□ 0.28
RPUSD1-204ENST00000563560 MGAT3Q09327 533 aa16.81■□□□□ 0.28
RPUSD1-204ENST00000563560 PRR16Q569H4 304 aa16.81■□□□□ 0.28
RPUSD1-204ENST00000563560 MOXD1Q6UVY6 613 aa16.81■□□□□ 0.28
RPUSD1-204ENST00000563560 DEFB128Q7Z7B8 93 aa16.81■□□□□ 0.28
RPUSD1-204ENST00000563560 CCDC155Q8N6L0 562 aa16.81■□□□□ 0.28
RPUSD1-204ENST00000563560 ETNPPLQ8TBG4 499 aa16.81■□□□□ 0.28
RPUSD1-204ENST00000563560 UIMC1Q96RL1 719 aa16.81■□□□□ 0.28
RPUSD1-204ENST00000563560 ZNF577Q9BSK1 485 aa16.81■□□□□ 0.28
RPUSD1-204ENST00000563560 C22orf23Q9BZE7 217 aa16.81■□□□□ 0.28
RPUSD1-204ENST00000563560 ORC3Q9UBD5 711 aaPredicted RBP16.81■□□□□ 0.28
RPUSD1-204ENST00000563560 CAND2O75155 1236 aa16.8■□□□□ 0.28
RPUSD1-204ENST00000563560 PARNO95453 639 aaKnown RBP16.8■□□□□ 0.28
RPUSD1-204ENST00000563560 DNAJB2P25686 324 aa16.8■□□□□ 0.28
RPUSD1-204ENST00000563560 ZNF76P36508 570 aa16.8■□□□□ 0.28
RPUSD1-204ENST00000563560 GRIK4Q16099 956 aa16.8■□□□□ 0.28
RPUSD1-204ENST00000563560 ZNF746Q6NUN9 644 aaPredicted RBP16.8■□□□□ 0.28
RPUSD1-204ENST00000563560 RETREG2Q8NC44 543 aa16.8■□□□□ 0.28
RPUSD1-204ENST00000563560 SEMA6BQ9H3T3 888 aa16.8■□□□□ 0.28
RPUSD1-204ENST00000563560 TBC1D22BQ9NU19 505 aa16.8■□□□□ 0.28
RPUSD1-204ENST00000563560 LIMCH1Q9UPQ0 1083 aa16.8■□□□□ 0.28
RPUSD1-204ENST00000563560 MAFBQ9Y5Q3 323 aaPredicted RBP16.8■□□□□ 0.28
RPUSD1-204ENST00000563560 COL4A6Q14031 1691 aa16.79■□□□□ 0.28
RPUSD1-204ENST00000563560 IGSF9BQ9UPX0 1349 aa16.79■□□□□ 0.28
RPUSD1-204ENST00000563560 TMEM265A0A087WTH1 108 aa16.79■□□□□ 0.28
RPUSD1-204ENST00000563560 FAM205CA6NFA0 338 aa16.79■□□□□ 0.28
RPUSD1-204ENST00000563560 DDX39AO00148 427 aaKnown RBP16.79■□□□□ 0.28
RPUSD1-204ENST00000563560 SLC37A4O43826 429 aa16.79■□□□□ 0.28
RPUSD1-204ENST00000563560 PSMD10O75832 226 aa16.79■□□□□ 0.28
RPUSD1-204ENST00000563560 INSRRP14616 1297 aa16.79■□□□□ 0.28
RPUSD1-204ENST00000563560 MARK3P27448 753 aa16.79■□□□□ 0.28
RPUSD1-204ENST00000563560 STAT5BP51692 787 aa16.79■□□□□ 0.28
RPUSD1-204ENST00000563560 PPFIA1Q13136 1202 aa16.79■□□□□ 0.28
RPUSD1-204ENST00000563560 KRT25Q7Z3Z0 450 aa16.79■□□□□ 0.28
RPUSD1-204ENST00000563560 GJA10Q969M2 543 aa16.79■□□□□ 0.28
RPUSD1-204ENST00000563560 ZBTB10Q96DT7 871 aa16.79■□□□□ 0.28
RPUSD1-204ENST00000563560 RIT2Q99578 217 aa16.79■□□□□ 0.28
RPUSD1-204ENST00000563560 YBX2Q9Y2T7 364 aaKnown RBP16.79■□□□□ 0.28
RPUSD1-204ENST00000563560 MYO9BQ13459 2157 aa16.78■□□□□ 0.28
RPUSD1-204ENST00000563560 ARID2Q68CP9 1835 aa16.78■□□□□ 0.28
RPUSD1-204ENST00000563560 A0A0C4DFX4 3053 aa16.78■□□□□ 0.28
RPUSD1-204ENST00000563560 BAIAP3O94812 1187 aa16.78■□□□□ 0.28
RPUSD1-204ENST00000563560 CHRNA1P02708 482 aa16.78■□□□□ 0.28
RPUSD1-204ENST00000563560 NR5A1Q13285 461 aa16.78■□□□□ 0.28
RPUSD1-204ENST00000563560 INF2Q27J81 1249 aa16.78■□□□□ 0.28
RPUSD1-204ENST00000563560 PLEKHG4Q58EX7 1191 aa16.78■□□□□ 0.28
RPUSD1-204ENST00000563560 SMAP1Q8IYB5 467 aaPredicted RBP16.78■□□□□ 0.28
RPUSD1-204ENST00000563560 GLG1Q92896 1179 aa16.78■□□□□ 0.28
RPUSD1-204ENST00000563560 KCNMB3Q9NPA1 279 aa16.78■□□□□ 0.28
RPUSD1-204ENST00000563560 VCANP13611 3396 aa16.78■□□□□ 0.28
RPUSD1-204ENST00000563560 RSPH10B2B2RC85 870 aa16.77■□□□□ 0.28
RPUSD1-204ENST00000563560 WNT7AO00755 349 aa16.77■□□□□ 0.28
RPUSD1-204ENST00000563560 ZNF862O60290 1169 aa16.77■□□□□ 0.28
RPUSD1-204ENST00000563560 STBD1O95210 358 aa16.77■□□□□ 0.28
RPUSD1-204ENST00000563560 CD2BP2O95400 341 aaKnown RBP16.77■□□□□ 0.28
RPUSD1-204ENST00000563560 MMP1P03956 469 aa16.77■□□□□ 0.28
RPUSD1-204ENST00000563560 RSPH10BP0C881 870 aa16.77■□□□□ 0.28
RPUSD1-204ENST00000563560 GNAT1P11488 350 aa16.77■□□□□ 0.28
RPUSD1-204ENST00000563560 THPOP40225 353 aa16.77■□□□□ 0.28
RPUSD1-204ENST00000563560 SLC26A2P50443 739 aa16.77■□□□□ 0.28
RPUSD1-204ENST00000563560 WDR5P61964 334 aaKnown RBP16.77■□□□□ 0.28
RPUSD1-204ENST00000563560 KRT76Q01546 638 aa16.77■□□□□ 0.28
RPUSD1-204ENST00000563560 NONOQ15233 471 aaKnown RBP eCLIP16.77■□□□□ 0.28
RPUSD1-204ENST00000563560 PPP4R3AQ6IN85 833 aa16.77■□□□□ 0.28
RPUSD1-204ENST00000563560 CNKSR3Q6P9H4 555 aa16.77■□□□□ 0.28
RPUSD1-204ENST00000563560 TRAPPC12Q8WVT3 735 aa16.77■□□□□ 0.28
RPUSD1-204ENST00000563560 UNC45AQ9H3U1 944 aa16.77■□□□□ 0.28
RPUSD1-204ENST00000563560 TUBE1Q9UJT0 475 aa16.77■□□□□ 0.28
RPUSD1-204ENST00000563560 XIRP2A4UGR9 3374 aa16.76■□□□□ 0.27
RPUSD1-204ENST00000563560 COL4A4P53420 1690 aaPredicted RBP16.76■□□□□ 0.27
RPUSD1-204ENST00000563560 TTC3P53804 2025 aa16.76■□□□□ 0.27
RPUSD1-204ENST00000563560 ARHGEF15O94989 841 aa16.76■□□□□ 0.27
RPUSD1-204ENST00000563560 UGCGQ16739 394 aa16.76■□□□□ 0.27
RPUSD1-204ENST00000563560 CCDC83Q8IWF9 413 aa16.76■□□□□ 0.27
RPUSD1-204ENST00000563560 PHOSPHO2Q8TCD6 241 aa16.76■□□□□ 0.27
RPUSD1-204ENST00000563560 ATP8B4Q8TF62 1192 aa16.76■□□□□ 0.27
RPUSD1-204ENST00000563560 WASF1Q92558 559 aa16.76■□□□□ 0.27
RPUSD1-204ENST00000563560 HAS1Q92839 578 aa16.76■□□□□ 0.27
RPUSD1-204ENST00000563560 TBC1D32Q96NH3 1257 aa16.76■□□□□ 0.27
RPUSD1-204ENST00000563560 CEP89Q96ST8 783 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms