RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 ABHD15Q6UXT9 468 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 SMAP1Q8IYB5 467 aaPredicted RBP11.36□□□□□ -0.59
SMG1-208ENST00000563448 KCTD17Q8N5Z5 321 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 SOCS4Q8WXH5 440 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 C7orf25Q9BPX7 421 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 LXNQ9BS40 222 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 MAN1B1Q9UKM7 699 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 GABRQQ9UN88 632 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 KAT6AQ92794 2004 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 MYMKA6NI61 221 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 ZBTB39O15060 712 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 EYA4O95677 639 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 IGHA2P01877 340 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 MYL1P05976 194 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 TXNP10599 105 aaKnown RBP11.36□□□□□ -0.59
SMG1-208ENST00000563448 SLC12A3P55017 1021 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 NLRP12P59046 1061 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 TTLL4Q14679 1199 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 PIGOQ8TEQ8 1089 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 SCFD2Q8WU76 684 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 COPS5Q92905 334 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 APBA2Q99767 749 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 TRIM9Q9C026 710 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 DNM3Q9UQ16 869 aa11.36□□□□□ -0.59
SMG1-208ENST00000563448 GSTTP1A0A1W2PQM5 241 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 KLRC4O43908 158 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 SMC2O95347 1197 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 PSAPP07602 524 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 BMP6P22004 513 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 QARSP47897 775 aaKnown RBP11.35□□□□□ -0.59
SMG1-208ENST00000563448 AMPD3Q01432 767 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 ACVR2BQ13705 512 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 MORC3Q14149 939 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 STX1AQ16623 288 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 ANO6Q4KMQ2 910 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 CELF3Q5SZQ8 465 aaKnown RBP11.35□□□□□ -0.59
SMG1-208ENST00000563448 OLFML2BQ68BL8 750 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 METTL7BQ6UX53 244 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 SYT2Q8N9I0 419 aaPredicted RBP11.35□□□□□ -0.59
SMG1-208ENST00000563448 NACC1Q96RE7 527 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 RBSNQ9H1K0 784 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 ABHD16BQ9H3Z7 469 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 ZSWIM4Q9H7M6 989 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 MLXIPQ9HAP2 919 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.35□□□□□ -0.59
SMG1-208ENST00000563448 FSD2A1L4K1 749 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 LYPLA2O95372 231 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 RPN1P04843 607 aaKnown RBP11.35□□□□□ -0.59
SMG1-208ENST00000563448 SSBP05455 408 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMG1-208ENST00000563448 SUPT20HL2P0C7V6 817 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 PTGS1P23219 599 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 ADCYAP1R1P41586 468 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 PSMC5P62195 406 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 PRAMEF19Q5SWL8 479 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 SWSAP1Q6NVH7 229 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 MIS18BP1Q6P0N0 1132 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 C11orf57Q6ZUT1 292 aaPredicted RBP11.35□□□□□ -0.59
SMG1-208ENST00000563448 CCDC60Q8IWA6 550 aaPredicted RBP11.35□□□□□ -0.59
SMG1-208ENST00000563448 EVPLQ92817 2033 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 GSDMAQ96QA5 445 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 BHMT2Q9H2M3 363 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 GABBR1Q9UBS5 961 aa11.35□□□□□ -0.59
SMG1-208ENST00000563448 IGKV6D-21A0A0A0MT36 114 aa11.34□□□□□ -0.59
SMG1-208ENST00000563448 GPR25O00155 361 aa11.34□□□□□ -0.59
SMG1-208ENST00000563448 CYP11B2P19099 503 aa11.34□□□□□ -0.59
SMG1-208ENST00000563448 CYP2C19P33261 490 aa11.34□□□□□ -0.59
SMG1-208ENST00000563448 KIF22Q14807 665 aa11.34□□□□□ -0.59
SMG1-208ENST00000563448 DPCR1Q3MIW9 517 aa11.34□□□□□ -0.59
SMG1-208ENST00000563448 KMT5BQ4FZB7 885 aa11.34□□□□□ -0.59
SMG1-208ENST00000563448 ARSHQ5FYA8 562 aa11.34□□□□□ -0.59
SMG1-208ENST00000563448 GJC2Q5T442 439 aaPredicted RBP11.34□□□□□ -0.59
SMG1-208ENST00000563448 CNNM4Q6P4Q7 775 aa11.34□□□□□ -0.59
SMG1-208ENST00000563448 DYMQ7RTS9 669 aa11.34□□□□□ -0.59
SMG1-208ENST00000563448 GPBP1Q86WP2 473 aa11.34□□□□□ -0.59
SMG1-208ENST00000563448 DHX37Q8IY37 1157 aaKnown RBP11.34□□□□□ -0.59
SMG1-208ENST00000563448 C4orf19Q8IY42 314 aa11.34□□□□□ -0.59
SMG1-208ENST00000563448 TRIML1Q8N9V2 468 aa11.34□□□□□ -0.59
SMG1-208ENST00000563448 CD99L2Q8TCZ2 262 aa11.34□□□□□ -0.59
SMG1-208ENST00000563448 DDX12PQ92771 950 aa11.34□□□□□ -0.59
SMG1-208ENST00000563448 LRRC27Q9C0I9 530 aa11.34□□□□□ -0.59
SMG1-208ENST00000563448 DNAJC25Q9H1X3 360 aa11.34□□□□□ -0.59
SMG1-208ENST00000563448 ANO10Q9NW15 660 aa11.34□□□□□ -0.59
SMG1-208ENST00000563448 ZHX1Q9UKY1 873 aaPredicted RBP11.34□□□□□ -0.59
SMG1-208ENST00000563448 IGSF9BQ9UPX0 1349 aa11.34□□□□□ -0.59
SMG1-208ENST00000563448 NPHP3-ACAD11A0A0J9YXS1 232 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 ZNF862O60290 1169 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 STBD1O95210 358 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 ZNF865P0CJ78 1059 aaPredicted RBP11.33□□□□□ -0.6
SMG1-208ENST00000563448 HSPA6P17066 643 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 FLT3LGP49771 235 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 PRKCZQ05513 592 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 ARHGAP1Q07960 439 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 HSDL1Q3SXM5 330 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 DNAJC19Q96DA6 116 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 PCYT2Q99447 389 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 GPR20Q99678 358 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 FRMPD3Q5JV73 1810 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 GOLGA6L3A6NEY3 463 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 ADCY6O43306 1168 aa11.33□□□□□ -0.6
SMG1-208ENST00000563448 XRCC5P13010 732 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms