RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 SETD4Q9NVD3 440 aa9.04□□□□□ -0.96
HERPUD1-206ENST00000563343 CDH22Q9UJ99 828 aa9.04□□□□□ -0.96
HERPUD1-206ENST00000563343 SORCS3Q9UPU3 1222 aa9.04□□□□□ -0.96
HERPUD1-206ENST00000563343 USP24Q9UPU5 2620 aa9.04□□□□□ -0.96
HERPUD1-206ENST00000563343 FSCN2O14926 492 aa9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 MAP3K13O43283 966 aa9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 GOLGA8HP0CJ92 632 aa9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 PYGBP11216 843 aa9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 SP100P23497 879 aaPredicted RBP9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 HSD17B4P51659 736 aa9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 ERVFC1P60507 584 aa9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 MTMR3Q13615 1198 aa9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 VPS53Q5VIR6 699 aa9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 ANKRD54Q6NXT1 300 aa9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 KCNV1Q6PIU1 500 aa9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 RUFY4Q6ZNE9 571 aa9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 VSIG10LQ86VR7 867 aa9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 RASGRP4Q8TDF6 673 aa9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 NEK1Q96PY6 1258 aa9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 CDCA3Q99618 268 aaPredicted RBP9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 LRRCC1Q9C099 1032 aa9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 UBA5Q9GZZ9 404 aa9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 AGO3Q9H9G7 860 aaKnown RBP9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 DLL3Q9NYJ7 618 aa9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 TELO2Q9Y4R8 837 aa9.03□□□□□ -0.96
HERPUD1-206ENST00000563343 C2CD4DB7Z1M9 353 aa9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 PI15O43692 258 aa9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 TGFB3P10600 412 aa9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 HSPD1P10809 573 aaKnown RBP9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 GNAT1P11488 350 aa9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 GATMP50440 423 aa9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 UBE3AQ05086 875 aa9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 PUM1Q14671 1186 aaKnown RBP eCLIP9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 PGM5Q15124 567 aa9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 PAN2Q504Q3 1202 aaKnown RBP9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 FBXO47Q5MNV8 452 aa9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 STOX1Q6ZVD7 989 aa9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 ZBTB33Q86T24 672 aa9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 TRIM50Q86XT4 487 aa9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 MCF2L2Q86YR7 1114 aa9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 NPAS4Q8IUM7 802 aa9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 TTC14Q96N46 770 aa9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 POMKQ9H5K3 350 aa9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 PATJQ8NI35 1801 aa9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 CCDC171Q6TFL3 1326 aa9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 EVPLQ92817 2033 aa9.02□□□□□ -0.97
HERPUD1-206ENST00000563343 FSD2A1L4K1 749 aa9.01□□□□□ -0.97
HERPUD1-206ENST00000563343 NPR3P17342 541 aa9.01□□□□□ -0.97
HERPUD1-206ENST00000563343 ARHGAP4P98171 946 aa9.01□□□□□ -0.97
HERPUD1-206ENST00000563343 SEMA3FQ13275 785 aa9.01□□□□□ -0.97
HERPUD1-206ENST00000563343 ANGPT1Q15389 498 aa9.01□□□□□ -0.97
HERPUD1-206ENST00000563343 ALX1Q15699 326 aa9.01□□□□□ -0.97
HERPUD1-206ENST00000563343 QRICH1Q2TAL8 776 aa9.01□□□□□ -0.97
HERPUD1-206ENST00000563343 GPATCH4Q5T3I0 446 aaKnown RBP9.01□□□□□ -0.97
HERPUD1-206ENST00000563343 TSHZ1Q6ZSZ6 1077 aa9.01□□□□□ -0.97
HERPUD1-206ENST00000563343 CCDC105Q8IYK2 499 aa9.01□□□□□ -0.97
HERPUD1-206ENST00000563343 ADGRF4Q8IZF3 695 aa9.01□□□□□ -0.97
HERPUD1-206ENST00000563343 MS4A3Q96HJ5 214 aa9.01□□□□□ -0.97
HERPUD1-206ENST00000563343 ZFP91Q96JP5 570 aaPredicted RBP9.01□□□□□ -0.97
HERPUD1-206ENST00000563343 GPR20Q99678 358 aa9.01□□□□□ -0.97
HERPUD1-206ENST00000563343 APOL5Q9BWW9 433 aa9.01□□□□□ -0.97
HERPUD1-206ENST00000563343 USP26Q9BXU7 913 aa9.01□□□□□ -0.97
HERPUD1-206ENST00000563343 MLXIPQ9HAP2 919 aa9.01□□□□□ -0.97
HERPUD1-206ENST00000563343 BAZ2BQ9UIF8 2168 aaKnown RBP9.01□□□□□ -0.97
HERPUD1-206ENST00000563343 NR2E1Q9Y466 385 aa9.01□□□□□ -0.97
HERPUD1-206ENST00000563343 PPP1R11O60927 126 aaPredicted RBP9□□□□□ -0.97
HERPUD1-206ENST00000563343 PPFIA3O75145 1194 aa9□□□□□ -0.97
HERPUD1-206ENST00000563343 CFBP00751 764 aa9□□□□□ -0.97
HERPUD1-206ENST00000563343 ASGR2P07307 311 aa9□□□□□ -0.97
HERPUD1-206ENST00000563343 MYCLP12524 364 aaPredicted RBP9□□□□□ -0.97
HERPUD1-206ENST00000563343 AOC1P19801 751 aa9□□□□□ -0.97
HERPUD1-206ENST00000563343 CD52P31358 61 aa9□□□□□ -0.97
HERPUD1-206ENST00000563343 TECP42680 631 aa9□□□□□ -0.97
HERPUD1-206ENST00000563343 RRP12Q5JTH9 1297 aaKnown RBP9□□□□□ -0.97
HERPUD1-206ENST00000563343 KIAA2013Q8IYS2 634 aa9□□□□□ -0.97
HERPUD1-206ENST00000563343 PI4K2BQ8TCG2 481 aa9□□□□□ -0.97
HERPUD1-206ENST00000563343 JMJD4Q9H9V9 463 aa9□□□□□ -0.97
HERPUD1-206ENST00000563343 HCSTQ9UBK5 93 aa9□□□□□ -0.97
HERPUD1-206ENST00000563343 MRPL11Q9Y3B7 192 aaKnown RBP9□□□□□ -0.97
HERPUD1-206ENST00000563343 PCDHB13Q9Y5F0 798 aa9□□□□□ -0.97
HERPUD1-206ENST00000563343 CDY2AQ9Y6F7 541 aa9□□□□□ -0.97
HERPUD1-206ENST00000563343 SPTBN2O15020 2390 aa9□□□□□ -0.97
HERPUD1-206ENST00000563343 FRMPD4Q14CM0 1322 aa9□□□□□ -0.97
HERPUD1-206ENST00000563343 NRCAMQ92823 1304 aa9□□□□□ -0.97
HERPUD1-206ENST00000563343 CHD8Q9HCK8 2581 aa9□□□□□ -0.97
HERPUD1-206ENST00000563343 MIA3Q5JRA6 1907 aa8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 CACNA1GO43497 2377 aa8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 MBLAC1A4D2B0 266 aaPredicted RBP8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 HIDE1A8MVS5 230 aa8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 FGF18O76093 207 aa8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 LMNAP02545 664 aaKnown RBP8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 HOXB8P17481 243 aaPredicted RBP8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 MRPS9P82933 396 aaKnown RBP8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 PLCB2Q00722 1185 aa8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 MARCH8Q5T0T0 291 aa8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 PDE12Q6L8Q7 609 aaKnown RBP8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 TAF2Q6P1X5 1199 aa8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 METTL7BQ6UX53 244 aa8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 ZDHHC14Q8IZN3 488 aa8.99□□□□□ -0.97
HERPUD1-206ENST00000563343 DTWD2Q8NBA8 298 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms