RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ZC3H3Q8IXZ2 948 aaKnown RBP21.14■□□□□ 0.98
SMPD3-203ENST00000563226 CEP63Q96MT8 703 aa21.14■□□□□ 0.98
SMPD3-203ENST00000563226 FAM207AQ9NSI2 230 aaPredicted RBP21.14■□□□□ 0.98
SMPD3-203ENST00000563226 RIPK3Q9Y572 518 aa21.14■□□□□ 0.98
SMPD3-203ENST00000563226 ZHX2Q9Y6X8 837 aa21.14■□□□□ 0.98
SMPD3-203ENST00000563226 ZBED4O75132 1171 aa21.14■□□□□ 0.97
SMPD3-203ENST00000563226 NDUFA10O95299 355 aa21.14■□□□□ 0.97
SMPD3-203ENST00000563226 CASQ1P31415 396 aa21.14■□□□□ 0.97
SMPD3-203ENST00000563226 EPHA7Q15375 998 aa21.14■□□□□ 0.97
SMPD3-203ENST00000563226 TKFCQ3LXA3 575 aa21.14■□□□□ 0.97
SMPD3-203ENST00000563226 C1orf186Q6ZWK4 172 aa21.14■□□□□ 0.97
SMPD3-203ENST00000563226 BANK1Q8NDB2 785 aa21.14■□□□□ 0.97
SMPD3-203ENST00000563226 TRERF1Q96PN7 1200 aa21.14■□□□□ 0.97
SMPD3-203ENST00000563226 EPN1Q9Y6I3 576 aaPredicted RBP21.14■□□□□ 0.97
SMPD3-203ENST00000563226 FRMPD4Q14CM0 1322 aa21.13■□□□□ 0.97
SMPD3-203ENST00000563226 TBCAO75347 108 aaKnown RBP21.13■□□□□ 0.97
SMPD3-203ENST00000563226 BCRP11274 1271 aa21.13■□□□□ 0.97
SMPD3-203ENST00000563226 ARHGAP25P42331 645 aa21.13■□□□□ 0.97
SMPD3-203ENST00000563226 ITGB3BPQ13352 177 aaPredicted RBP21.13■□□□□ 0.97
SMPD3-203ENST00000563226 KRT26Q7Z3Y9 468 aa21.13■□□□□ 0.97
SMPD3-203ENST00000563226 SMCR8Q8TEV9 937 aaPredicted RBP21.13■□□□□ 0.97
SMPD3-203ENST00000563226 ERO1AQ96HE7 468 aa21.13■□□□□ 0.97
SMPD3-203ENST00000563226 RIT2Q99578 217 aa21.13■□□□□ 0.97
SMPD3-203ENST00000563226 LXNQ9BS40 222 aa21.13■□□□□ 0.97
SMPD3-203ENST00000563226 AS3MTQ9HBK9 375 aa21.13■□□□□ 0.97
SMPD3-203ENST00000563226 CTDP1Q9Y5B0 961 aaPredicted RBP21.13■□□□□ 0.97
SMPD3-203ENST00000563226 UBIAD1Q9Y5Z9 338 aa21.13■□□□□ 0.97
SMPD3-203ENST00000563226 A0A1W2PQJ5 194 aa21.13■□□□□ 0.97
SMPD3-203ENST00000563226 DHX15O43143 795 aaKnown RBP21.13■□□□□ 0.97
SMPD3-203ENST00000563226 KIF20AO95235 890 aa21.13■□□□□ 0.97
SMPD3-203ENST00000563226 PCNX4Q63HM2 1172 aa21.13■□□□□ 0.97
SMPD3-203ENST00000563226 DLK2Q6UY11 383 aa21.13■□□□□ 0.97
SMPD3-203ENST00000563226 GPC2Q8N158 579 aa21.13■□□□□ 0.97
SMPD3-203ENST00000563226 KCTD17Q8N5Z5 321 aa21.13■□□□□ 0.97
SMPD3-203ENST00000563226 KLRG1Q96E93 195 aa21.13■□□□□ 0.97
SMPD3-203ENST00000563226 MMRN2Q9H8L6 949 aa21.13■□□□□ 0.97
SMPD3-203ENST00000563226 KCNA1Q09470 495 aa21.12■□□□□ 0.97
SMPD3-203ENST00000563226 ADAM9Q13443 819 aa21.12■□□□□ 0.97
SMPD3-203ENST00000563226 PRKG1Q13976 671 aa21.12■□□□□ 0.97
SMPD3-203ENST00000563226 KNOP1Q1ED39 458 aaKnown RBP21.12■□□□□ 0.97
SMPD3-203ENST00000563226 TSR1Q2NL82 804 aaKnown RBP21.12■□□□□ 0.97
SMPD3-203ENST00000563226 TRIM59Q8IWR1 403 aa21.12■□□□□ 0.97
SMPD3-203ENST00000563226 REPS2Q8NFH8 660 aa21.12■□□□□ 0.97
SMPD3-203ENST00000563226 AGO4Q9HCK5 861 aaKnown RBP21.12■□□□□ 0.97
SMPD3-203ENST00000563226 MYH11P35749 1972 aa21.12■□□□□ 0.97
SMPD3-203ENST00000563226 KCNMA1Q12791 1236 aa21.11■□□□□ 0.97
SMPD3-203ENST00000563226 PGM5Q15124 567 aa21.11■□□□□ 0.97
SMPD3-203ENST00000563226 EDRF1Q3B7T1 1238 aa21.11■□□□□ 0.97
SMPD3-203ENST00000563226 NSMFQ6X4W1 530 aa21.11■□□□□ 0.97
SMPD3-203ENST00000563226 LOXHD1Q8IVV2 1947 aa21.11■□□□□ 0.97
SMPD3-203ENST00000563226 GCNT3O95395 438 aa21.11■□□□□ 0.97
SMPD3-203ENST00000563226 LMNB1P20700 586 aa21.11■□□□□ 0.97
SMPD3-203ENST00000563226 NR2F2P24468 414 aa21.11■□□□□ 0.97
SMPD3-203ENST00000563226 MARSP56192 900 aaKnown RBP21.11■□□□□ 0.97
SMPD3-203ENST00000563226 HERVK_113P62684 666 aa21.11■□□□□ 0.97
SMPD3-203ENST00000563226 PPP4R3CPQ6ZMV5 832 aa21.11■□□□□ 0.97
SMPD3-203ENST00000563226 RNF207Q6ZRF8 634 aa21.11■□□□□ 0.97
SMPD3-203ENST00000563226 NIPA1Q7RTP0 329 aa21.11■□□□□ 0.97
SMPD3-203ENST00000563226 UPF1Q92900 1129 aaKnown RBP eCLIP21.11■□□□□ 0.97
SMPD3-203ENST00000563226 NACC1Q96RE7 527 aa21.11■□□□□ 0.97
SMPD3-203ENST00000563226 IKZF4Q9H2S9 585 aa21.11■□□□□ 0.97
SMPD3-203ENST00000563226 JADE2Q9NQC1 790 aa21.11■□□□□ 0.97
SMPD3-203ENST00000563226 RNF146Q9NTX7 359 aa21.11■□□□□ 0.97
SMPD3-203ENST00000563226 TFR2Q9UP52 801 aa21.11■□□□□ 0.97
SMPD3-203ENST00000563226 TRAF3IP3Q9Y228 551 aa21.11■□□□□ 0.97
SMPD3-203ENST00000563226 WDR90Q96KV7 1748 aa21.11■□□□□ 0.97
SMPD3-203ENST00000563226 ASTN1O14525 1302 aa21.1■□□□□ 0.97
SMPD3-203ENST00000563226 NMT1P30419 496 aaKnown RBP21.1■□□□□ 0.97
SMPD3-203ENST00000563226 BMT2Q1RMZ1 405 aa21.1■□□□□ 0.97
SMPD3-203ENST00000563226 ARHGAP29Q52LW3 1261 aa21.1■□□□□ 0.97
SMPD3-203ENST00000563226 GPIHBP1Q8IV16 184 aa21.1■□□□□ 0.97
SMPD3-203ENST00000563226 C12orf42Q96LP6 360 aa21.1■□□□□ 0.97
SMPD3-203ENST00000563226 TRIM10Q9UDY6 481 aa21.1■□□□□ 0.97
SMPD3-203ENST00000563226 FAM13AO94988 1023 aa21.09■□□□□ 0.97
SMPD3-203ENST00000563226 GNA14O95837 355 aa21.09■□□□□ 0.97
SMPD3-203ENST00000563226 MYCLP12524 364 aaPredicted RBP21.09■□□□□ 0.97
SMPD3-203ENST00000563226 MUTP22033 750 aa21.09■□□□□ 0.97
SMPD3-203ENST00000563226 MTMR1Q13613 665 aa21.09■□□□□ 0.97
SMPD3-203ENST00000563226 MIER3Q7Z3K6 550 aa21.09■□□□□ 0.97
SMPD3-203ENST00000563226 RMDN3Q96TC7 470 aa21.09■□□□□ 0.97
SMPD3-203ENST00000563226 PXMP2Q9NR77 195 aa21.09■□□□□ 0.97
SMPD3-203ENST00000563226 OLFML3Q9NRN5 406 aa21.09■□□□□ 0.97
SMPD3-203ENST00000563226 CETN3O15182 167 aa21.09■□□□□ 0.97
SMPD3-203ENST00000563226 KIF5CO60282 957 aa21.09■□□□□ 0.97
SMPD3-203ENST00000563226 PLEKP08567 350 aaPredicted RBP21.09■□□□□ 0.97
SMPD3-203ENST00000563226 GAP43P17677 238 aa21.09■□□□□ 0.97
SMPD3-203ENST00000563226 ELF2Q15723 593 aa21.09■□□□□ 0.97
SMPD3-203ENST00000563226 ZNF569Q5MCW4 686 aa21.09■□□□□ 0.97
SMPD3-203ENST00000563226 MYCT1Q8N699 235 aa21.09■□□□□ 0.97
SMPD3-203ENST00000563226 ZNF397Q8NF99 534 aaPredicted RBP21.09■□□□□ 0.97
SMPD3-203ENST00000563226 PDCD2LQ9BRP1 358 aa21.09■□□□□ 0.97
SMPD3-203ENST00000563226 NHEJ1Q9H9Q4 299 aaPredicted RBP21.09■□□□□ 0.97
SMPD3-203ENST00000563226 MAP3K20Q9NYL2 800 aaKnown RBP21.09■□□□□ 0.97
SMPD3-203ENST00000563226 DSG3P32926 999 aa21.08■□□□□ 0.97
SMPD3-203ENST00000563226 BAATQ14032 418 aaPredicted RBP21.08■□□□□ 0.97
SMPD3-203ENST00000563226 ZC2HC1CQ53FD0 456 aaPredicted RBP21.08■□□□□ 0.97
SMPD3-203ENST00000563226 SNRNP48Q6IEG0 339 aaKnown RBP21.08■□□□□ 0.97
SMPD3-203ENST00000563226 BAP1Q92560 729 aa21.08■□□□□ 0.97
SMPD3-203ENST00000563226 FIZ1Q96SL8 496 aa21.08■□□□□ 0.97
SMPD3-203ENST00000563226 ZNHIT6Q9NWK9 470 aaKnown RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms