RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ZNF827Q17R98 1081 aa4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 CR1LQ2VPA4 569 aa4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 FAM47CQ5HY64 1035 aa4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 STEAP3Q658P3 488 aa4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 DDX53Q86TM3 631 aaKnown RBP4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 THNSL2Q86YJ6 484 aa4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 UHMK1Q8TAS1 419 aaKnown RBP4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 PIP4K2CQ8TBX8 421 aa4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 PHOSPHO1Q8TCT1 267 aa4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 GPR20Q99678 358 aa4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 KCNJ15Q99712 375 aa4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 TARS2Q9BW92 718 aaKnown RBP4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 CBLCQ9ULV8 474 aa4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 MAPRE3Q9UPY8 281 aa4.64□□□□□ -1.67
SHCBP1-202ENST00000563219 MROH6A6NGR9 719 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 DDX3XO00571 662 aaKnown RBP eCLIP4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 HGSO14964 777 aaPredicted RBP4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 MAFKO60675 156 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 PLATP00750 562 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 AMY2AP04746 511 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 PYGMP11217 842 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 GNAT1P11488 350 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 INSRRP14616 1297 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 AMY2BP19961 511 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 STAT5AP42229 794 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 NKX3-2P78367 333 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 GPR19Q15760 415 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 CRY1Q16526 586 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 TBC1D10BQ4KMP7 808 aaPredicted RBP4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 TMEM177Q53S58 311 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 CDCA2Q69YH5 1023 aaPredicted RBP4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 MCTP2Q6DN12 878 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 UBE2R2Q712K3 238 aaPredicted RBP4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 OVCH1Q7RTY7 1134 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 FAM124AQ86V42 546 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 KIF18BQ86Y91 864 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 LGI4Q8N135 537 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 PPM1KQ8N3J5 372 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 TXNDC5Q8NBS9 432 aaKnown RBP4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 SMOC1Q9H4F8 434 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 SAMD15Q9P1V8 674 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 MYRFQ9Y2G1 1151 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 COQ6Q9Y2Z9 468 aa4.63□□□□□ -1.67
SHCBP1-202ENST00000563219 TCRBV5S4A2TA0A5A2 114 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 ZNF561-AS1K7EIQ3 104 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 NKRFO15226 690 aaKnown RBP eCLIP4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 PDE8AO60658 829 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 GLRX3O76003 335 aaKnown RBP4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 JMJD7P0C870 316 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 MYCLP1P12525 358 aaPredicted RBP4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 PDE6AP16499 860 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 NCLP19338 710 aaKnown RBP4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 STAT3P40763 770 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 MECP2P51608 486 aaKnown RBP4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 EPHA5P54756 1037 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 ST5P78524 1137 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 ADAM9Q13443 819 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 BORAQ6PGQ7 559 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 KRT26Q7Z3Y9 468 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 AHI1Q8N157 1196 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 IGSF22Q8N9C0 903 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 SH3RF2Q8TEC5 729 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 TOE1Q96GM8 510 aaKnown RBP4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 YIPF4Q9BSR8 244 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 MTFR1LQ9H019 292 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 SPC25Q9HBM1 224 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 CATSPERZQ9NTU4 200 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 SMPD4Q9NXE4 827 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 MYOTQ9UBF9 498 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 ASH2LQ9UBL3 628 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 DSEQ9UL01 958 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 INVSQ9Y283 1065 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 NUB1Q9Y5A7 615 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 PCDHB4Q9Y5E5 795 aa4.62□□□□□ -1.67
SHCBP1-202ENST00000563219 TCRBV5S2A0A599 114 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 M0R2C6 588 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 CBX4O00257 560 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 COL6A2P12110 1019 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 DNM2P50570 870 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 ADAM17P78536 824 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 CFAP100Q494V2 611 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 RNF187Q5TA31 235 aaPredicted RBP4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 PIK3R6Q5UE93 754 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 CNNM4Q6P4Q7 775 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 ARHGAP36Q6ZRI8 547 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 OTOP1Q7RTM1 612 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 RNF180Q86T96 592 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 OSTM1Q86WC4 334 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 TRIM48Q8IWZ4 208 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 ARRDC4Q8NCT1 418 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 TTLL11Q8NHH1 800 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 WNK4Q96J92 1243 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 LCORQ96JN0 433 aaPredicted RBP4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 SAMD11Q96NU1 681 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 CAAP1Q9H8G2 361 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 SMURF1Q9HCE7 757 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 DTLQ9NZJ0 730 aa4.61□□□□□ -1.67
SHCBP1-202ENST00000563219 C9orf118A6NHY6 69 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 TRAF5O00463 557 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 MAN2B1O00754 1011 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms