RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 PDIA5Q14554 519 aa21.14■□□□□ 0.97
RAB40C-207ENST00000563109 SWSAP1Q6NVH7 229 aa21.14■□□□□ 0.97
RAB40C-207ENST00000563109 PDXDC2PQ6P474 469 aa21.14■□□□□ 0.97
RAB40C-207ENST00000563109 NECAB2Q7Z6G3 386 aa21.14■□□□□ 0.97
RAB40C-207ENST00000563109 TRIM50Q86XT4 487 aa21.14■□□□□ 0.97
RAB40C-207ENST00000563109 CCDC60Q8IWA6 550 aaPredicted RBP21.14■□□□□ 0.97
RAB40C-207ENST00000563109 C11orf49Q9H6J7 331 aa21.14■□□□□ 0.97
RAB40C-207ENST00000563109 STARD7Q9NQZ5 370 aa21.14■□□□□ 0.97
RAB40C-207ENST00000563109 GABBR1Q9UBS5 961 aa21.14■□□□□ 0.97
RAB40C-207ENST00000563109 TCHHQ07283 1943 aa21.14■□□□□ 0.97
RAB40C-207ENST00000563109 KIAA0100Q14667 2235 aaKnown RBP21.13■□□□□ 0.97
RAB40C-207ENST00000563109 IGSF9BQ9UPX0 1349 aa21.13■□□□□ 0.97
RAB40C-207ENST00000563109 IGKV6D-21A0A0A0MT36 114 aa21.13■□□□□ 0.97
RAB40C-207ENST00000563109 H3BRB1 525 aa21.13■□□□□ 0.97
RAB40C-207ENST00000563109 PPP6R2O75170 966 aa21.13■□□□□ 0.97
RAB40C-207ENST00000563109 LONP1P36776 959 aaKnown RBP21.13■□□□□ 0.97
RAB40C-207ENST00000563109 PSEN2P49810 448 aa21.13■□□□□ 0.97
RAB40C-207ENST00000563109 MFSD10Q14728 455 aa21.13■□□□□ 0.97
RAB40C-207ENST00000563109 PLPPR4Q7Z2D5 763 aa21.13■□□□□ 0.97
RAB40C-207ENST00000563109 CKAP2LQ8IYA6 745 aa21.13■□□□□ 0.97
RAB40C-207ENST00000563109 IGSF22Q8N9C0 903 aa21.13■□□□□ 0.97
RAB40C-207ENST00000563109 KRI1Q8N9T8 703 aaKnown RBP21.13■□□□□ 0.97
RAB40C-207ENST00000563109 AFAP1L1Q8TED9 768 aa21.13■□□□□ 0.97
RAB40C-207ENST00000563109 DIS3LQ8TF46 1054 aaKnown RBP21.13■□□□□ 0.97
RAB40C-207ENST00000563109 SPATA32Q96LK8 384 aa21.13■□□□□ 0.97
RAB40C-207ENST00000563109 AK8Q96MA6 479 aa21.13■□□□□ 0.97
RAB40C-207ENST00000563109 C16orf70Q9BSU1 422 aa21.13■□□□□ 0.97
RAB40C-207ENST00000563109 SCAND2PQ9GZW5 306 aaPredicted RBP21.13■□□□□ 0.97
RAB40C-207ENST00000563109 TUT1Q9H6E5 874 aaKnown RBP21.13■□□□□ 0.97
RAB40C-207ENST00000563109 SRPRBQ9Y5M8 271 aaKnown RBP21.13■□□□□ 0.97
RAB40C-207ENST00000563109 SCN10AQ9Y5Y9 1956 aa21.12■□□□□ 0.97
RAB40C-207ENST00000563109 P4HBP07237 508 aaKnown RBP21.12■□□□□ 0.97
RAB40C-207ENST00000563109 MARK3P27448 753 aa21.12■□□□□ 0.97
RAB40C-207ENST00000563109 MNX1P50219 401 aaPredicted RBP21.12■□□□□ 0.97
RAB40C-207ENST00000563109 IL17AQ16552 155 aa21.12■□□□□ 0.97
RAB40C-207ENST00000563109 KRT79Q5XKE5 535 aa21.12■□□□□ 0.97
RAB40C-207ENST00000563109 TNPO1Q92973 898 aaKnown RBP21.12■□□□□ 0.97
RAB40C-207ENST00000563109 PAWRQ96IZ0 340 aaKnown RBP21.12■□□□□ 0.97
RAB40C-207ENST00000563109 PCYT2Q99447 389 aa21.12■□□□□ 0.97
RAB40C-207ENST00000563109 EIF2AK1Q9BQI3 630 aaKnown RBP21.12■□□□□ 0.97
RAB40C-207ENST00000563109 SENP6Q9GZR1 1112 aaPredicted RBP21.12■□□□□ 0.97
RAB40C-207ENST00000563109 FBXO2Q9UK22 296 aaPredicted RBP21.12■□□□□ 0.97
RAB40C-207ENST00000563109 A0A0U1RQG5 324 aaPredicted RBP21.11■□□□□ 0.97
RAB40C-207ENST00000563109 QARSP47897 775 aaKnown RBP21.11■□□□□ 0.97
RAB40C-207ENST00000563109 ME1P48163 572 aa21.11■□□□□ 0.97
RAB40C-207ENST00000563109 PSMC5P62195 406 aa21.11■□□□□ 0.97
RAB40C-207ENST00000563109 KIAA0753Q2KHM9 967 aa21.11■□□□□ 0.97
RAB40C-207ENST00000563109 BANK1Q8NDB2 785 aa21.11■□□□□ 0.97
RAB40C-207ENST00000563109 SNX29Q8TEQ0 813 aa21.11■□□□□ 0.97
RAB40C-207ENST00000563109 KAT2BQ92831 832 aa21.11■□□□□ 0.97
RAB40C-207ENST00000563109 DYDC2Q96IM9 177 aa21.11■□□□□ 0.97
RAB40C-207ENST00000563109 FAM167AQ96KS9 214 aa21.11■□□□□ 0.97
RAB40C-207ENST00000563109 LXNQ9BS40 222 aa21.11■□□□□ 0.97
RAB40C-207ENST00000563109 COL6A1P12109 1028 aa21.1■□□□□ 0.97
RAB40C-207ENST00000563109 PSMC6P62333 389 aa21.1■□□□□ 0.97
RAB40C-207ENST00000563109 PRKCEQ02156 737 aa21.1■□□□□ 0.97
RAB40C-207ENST00000563109 CYP4A11Q02928 519 aa21.1■□□□□ 0.97
RAB40C-207ENST00000563109 LEO1Q8WVC0 666 aaPredicted RBP21.1■□□□□ 0.97
RAB40C-207ENST00000563109 CHAMP1Q96JM3 812 aa21.1■□□□□ 0.97
RAB40C-207ENST00000563109 SEZ6LQ9BYH1 1024 aa21.1■□□□□ 0.97
RAB40C-207ENST00000563109 TUFT1Q9NNX1 390 aa21.1■□□□□ 0.97
RAB40C-207ENST00000563109 RCOR1Q9UKL0 485 aa21.1■□□□□ 0.97
RAB40C-207ENST00000563109 TRPC6Q9Y210 931 aa21.1■□□□□ 0.97
RAB40C-207ENST00000563109 MAFBQ9Y5Q3 323 aaPredicted RBP21.1■□□□□ 0.97
RAB40C-207ENST00000563109 KDM3AQ9Y4C1 1321 aa21.09■□□□□ 0.97
RAB40C-207ENST00000563109 HAS3O00219 553 aa21.09■□□□□ 0.97
RAB40C-207ENST00000563109 CUTAO60888 179 aa21.09■□□□□ 0.97
RAB40C-207ENST00000563109 TXLNAP40222 546 aa21.09■□□□□ 0.97
RAB40C-207ENST00000563109 CCT6AP40227 531 aaKnown RBP21.09■□□□□ 0.97
RAB40C-207ENST00000563109 ITGA7Q13683 1181 aa21.09■□□□□ 0.97
RAB40C-207ENST00000563109 UGCGQ16739 394 aa21.09■□□□□ 0.97
RAB40C-207ENST00000563109 FAM47CQ5HY64 1035 aa21.09■□□□□ 0.97
RAB40C-207ENST00000563109 C7orf31Q8N865 590 aa21.09■□□□□ 0.97
RAB40C-207ENST00000563109 POLR3CQ9BUI4 534 aaPredicted RBP21.09■□□□□ 0.97
RAB40C-207ENST00000563109 CSRNP2Q9H175 543 aa21.09■□□□□ 0.97
RAB40C-207ENST00000563109 ZSWIM4Q9H7M6 989 aa21.09■□□□□ 0.97
RAB40C-207ENST00000563109 RGL1Q9NZL6 768 aa21.09■□□□□ 0.97
RAB40C-207ENST00000563109 LOXHD1Q8IVV2 1947 aa21.08■□□□□ 0.97
RAB40C-207ENST00000563109 POTEB3A0JP26 581 aa21.08■□□□□ 0.97
RAB40C-207ENST00000563109 PP2D1A8MPX8 630 aa21.08■□□□□ 0.97
RAB40C-207ENST00000563109 OATP04181 439 aa21.08■□□□□ 0.97
RAB40C-207ENST00000563109 RPA1P27694 616 aa21.08■□□□□ 0.97
RAB40C-207ENST00000563109 UBA7P41226 1012 aa21.08■□□□□ 0.97
RAB40C-207ENST00000563109 GRIN1Q05586 938 aa21.08■□□□□ 0.97
RAB40C-207ENST00000563109 CTTNQ14247 550 aaKnown RBP21.08■□□□□ 0.97
RAB40C-207ENST00000563109 PLCB4Q15147 1175 aa21.08■□□□□ 0.97
RAB40C-207ENST00000563109 CSPP1Q1MSJ5 1256 aa21.08■□□□□ 0.97
RAB40C-207ENST00000563109 NBPF20Q3BBV1 942 aa21.08■□□□□ 0.97
RAB40C-207ENST00000563109 NFRKBQ6P4R8 1299 aa21.08■□□□□ 0.97
RAB40C-207ENST00000563109 POTEBQ6S5H4 581 aa21.08■□□□□ 0.97
RAB40C-207ENST00000563109 TPH2Q8IWU9 490 aa21.08■□□□□ 0.97
RAB40C-207ENST00000563109 RASSF8Q8NHQ8 419 aa21.08■□□□□ 0.97
RAB40C-207ENST00000563109 ATP8B4Q8TF62 1192 aa21.08■□□□□ 0.97
RAB40C-207ENST00000563109 BBXQ8WY36 941 aaPredicted RBP21.08■□□□□ 0.97
RAB40C-207ENST00000563109 CDK5RAP3Q96JB5 506 aa21.08■□□□□ 0.97
RAB40C-207ENST00000563109 CLIC6Q96NY7 704 aa21.08■□□□□ 0.97
RAB40C-207ENST00000563109 HSD17B14Q9BPX1 270 aa21.08■□□□□ 0.97
RAB40C-207ENST00000563109 MROH7Q68CQ1 1323 aa21.07■□□□□ 0.96
RAB40C-207ENST00000563109 SLC26A4O43511 780 aa21.07■□□□□ 0.96
RAB40C-207ENST00000563109 MUTP22033 750 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms