RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 CNOT7Q9UIV1 285 aaKnown RBP10.83□□□□□ -0.68
SMG1-205ENST00000561947 CDC23Q9UJX2 597 aa10.83□□□□□ -0.68
SMG1-205ENST00000561947 FAM184BQ9ULE4 1060 aa10.83□□□□□ -0.68
SMG1-205ENST00000561947 FZD9O00144 591 aa10.83□□□□□ -0.68
SMG1-205ENST00000561947 NFIBO00712 420 aa10.83□□□□□ -0.68
SMG1-205ENST00000561947 IPO7O95373 1038 aaKnown RBP10.83□□□□□ -0.68
SMG1-205ENST00000561947 H2AFXP16104 143 aaPredicted RBP10.83□□□□□ -0.68
SMG1-205ENST00000561947 HOXD13P35453 343 aa10.83□□□□□ -0.68
SMG1-205ENST00000561947 DGKZQ13574 1117 aa10.83□□□□□ -0.68
SMG1-205ENST00000561947 ARHGAP27Q6ZUM4 889 aa10.83□□□□□ -0.68
SMG1-205ENST00000561947 KIAA1328Q86T90 577 aa10.83□□□□□ -0.68
SMG1-205ENST00000561947 PIGOQ8TEQ8 1089 aa10.83□□□□□ -0.68
SMG1-205ENST00000561947 SMCR8Q8TEV9 937 aaPredicted RBP10.83□□□□□ -0.68
SMG1-205ENST00000561947 BAP1Q92560 729 aa10.83□□□□□ -0.68
SMG1-205ENST00000561947 SLC38A10Q9HBR0 1119 aa10.83□□□□□ -0.68
SMG1-205ENST00000561947 COL20A1Q9P218 1284 aa10.83□□□□□ -0.68
SMG1-205ENST00000561947 TRIM10Q9UDY6 481 aa10.83□□□□□ -0.68
SMG1-205ENST00000561947 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.83□□□□□ -0.68
SMG1-205ENST00000561947 GJA3Q9Y6H8 435 aa10.83□□□□□ -0.68
SMG1-205ENST00000561947 PDXKO00764 312 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 CALUO43852 315 aaPredicted RBP10.82□□□□□ -0.68
SMG1-205ENST00000561947 PRPF6O94906 941 aaKnown RBP10.82□□□□□ -0.68
SMG1-205ENST00000561947 BCRP11274 1271 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 NR2F2P24468 414 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 PDXDC1Q6P996 788 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 C1orf186Q6ZWK4 172 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 CCDC125Q86Z20 511 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 CCDC155Q8N6L0 562 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 JAKMIP2Q96AA8 810 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 RIT2Q99578 217 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 OLFML3Q9NRN5 406 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 GUCA1BQ9UMX6 200 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 CD2APQ9Y5K6 639 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 MYH11P35749 1972 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 LRRC53A6NM62 1247 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 IPO5O00410 1097 aaKnown RBP10.82□□□□□ -0.68
SMG1-205ENST00000561947 FAM13AO94988 1023 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 ALAS1P13196 640 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 ITGB5P18084 799 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 VCAM1P19320 739 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 MTMR2Q13614 643 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 CCDC122Q5T0U0 273 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 RSRC2Q7L4I2 434 aaKnown RBP10.82□□□□□ -0.68
SMG1-205ENST00000561947 RRAGAQ7L523 313 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 NIPA1Q7RTP0 329 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 CPXCR1Q8N123 301 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 CCDC42Q96M95 316 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 NACC1Q96RE7 527 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 RAVER2Q9HCJ3 691 aaKnown RBP10.82□□□□□ -0.68
SMG1-205ENST00000561947 TYW1Q9NV66 732 aaKnown RBP10.82□□□□□ -0.68
SMG1-205ENST00000561947 CEP72Q9P209 647 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 ARHGAP20Q9P2F6 1191 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 PPP1R9AQ9ULJ8 1098 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 FRMPD4Q14CM0 1322 aa10.82□□□□□ -0.68
SMG1-205ENST00000561947 KRT86O43790 486 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 FLOT1O75955 427 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 GCNT3O95395 438 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 PLEKP08567 350 aaPredicted RBP10.81□□□□□ -0.68
SMG1-205ENST00000561947 USP14P54578 494 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 NBPF12Q5TAG4 269 aaPredicted RBP10.81□□□□□ -0.68
SMG1-205ENST00000561947 DCAF15Q66K64 600 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 CACNA2D4Q7Z3S7 1137 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 FRMD5Q7Z6J6 570 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 SAMD3Q8N6K7 520 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 NEK9Q8TD19 979 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 MAP3K20Q9NYL2 800 aaKnown RBP10.81□□□□□ -0.68
SMG1-205ENST00000561947 ASTN1O14525 1302 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 EIF3DO15371 548 aaKnown RBP eCLIP10.81□□□□□ -0.68
SMG1-205ENST00000561947 VAV2P52735 878 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 MUM1L1Q5H9M0 696 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 SRGAP1Q7Z6B7 1085 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 CEP112Q8N8E3 955 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 EHBP1Q8NDI1 1231 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 IL31RAQ8NI17 732 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 SYTL5Q8TDW5 730 aaPredicted RBP10.81□□□□□ -0.68
SMG1-205ENST00000561947 GOLGA1Q92805 767 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 LSM14BQ9BX40 385 aaKnown RBP10.81□□□□□ -0.68
SMG1-205ENST00000561947 RPAP3Q9H6T3 665 aaPredicted RBP10.81□□□□□ -0.68
SMG1-205ENST00000561947 BCAS3Q9H6U6 928 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 WRAP73Q9P2S5 460 aaPredicted RBP10.81□□□□□ -0.68
SMG1-205ENST00000561947 TFR2Q9UP52 801 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 RCCD1A6NED2 376 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 ZBTB39O15060 712 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 NOL4O94818 638 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 LCA5LO95447 670 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 SPA17Q15506 151 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 TEX35Q5T0J7 233 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 PCNX4Q63HM2 1172 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 MYCT1Q8N699 235 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 SGIP1Q9BQI5 828 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 LXNQ9BS40 222 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 NUCKS1Q9H1E3 243 aaKnown RBP10.81□□□□□ -0.68
SMG1-205ENST00000561947 PARVGQ9HBI0 331 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 POLD4Q9HCU8 107 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 KCNH7Q9NS40 1196 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 KCND2Q9NZV8 630 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 PNMA2Q9UL42 364 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 UBIAD1Q9Y5Z9 338 aa10.81□□□□□ -0.68
SMG1-205ENST00000561947 COL11A1P12107 1806 aaPredicted RBP10.8□□□□□ -0.68
SMG1-205ENST00000561947 UBE4BO95155 1302 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms