RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 FAM184BQ9ULE4 1060 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 EP400Q96L91 3159 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 POTEFA5A3E0 1075 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 NOL4O94818 638 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 POTEIP0CG38 1075 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 EEF2P13639 858 aaKnown RBP12.05□□□□□ -0.48
NEIL1-202ENST00000561643 GGCXP38435 758 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 DNA2P51530 1060 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 USP11P51784 963 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 CACNB3P54284 484 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 APBA1Q02410 837 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 ITIH3Q06033 890 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 SLFN13Q68D06 897 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 POTEGQ6S5H5 508 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 POTEEQ6S8J3 1075 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 ARHGAP27Q6ZUM4 889 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 TRIM59Q8IWR1 403 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 ZFPM1Q8IX07 1006 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 DMGDHQ9UI17 866 aaKnown RBP12.05□□□□□ -0.48
NEIL1-202ENST00000561643 FOCADQ5VW36 1801 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 KLRG2A4D1S0 409 aaPredicted RBP12.05□□□□□ -0.48
NEIL1-202ENST00000561643 MED24O75448 989 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 SLC7A5Q01650 507 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 PRR16Q569H4 304 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 HAUS3Q68CZ6 603 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 HHIPL2Q6UWX4 724 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 SND1Q7KZF4 910 aaKnown RBP eCLIP12.05□□□□□ -0.48
NEIL1-202ENST00000561643 SLFN12Q8IYM2 578 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 RNF10Q8N5U6 811 aaKnown RBP12.05□□□□□ -0.48
NEIL1-202ENST00000561643 TMX4Q9H1E5 349 aaPredicted RBP12.05□□□□□ -0.48
NEIL1-202ENST00000561643 KCNMB3Q9NPA1 279 aa12.05□□□□□ -0.48
NEIL1-202ENST00000561643 MYH7BA7E2Y1 1941 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 CCDC189A1A4V9 331 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 EBAG9O00559 213 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 CETN3O15182 167 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 TLR2O60603 784 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 IKQ13123 557 aaPredicted RBP12.04□□□□□ -0.48
NEIL1-202ENST00000561643 SHROOM1Q2M3G4 852 aaPredicted RBP12.04□□□□□ -0.48
NEIL1-202ENST00000561643 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.04□□□□□ -0.48
NEIL1-202ENST00000561643 ZNF572Q7Z3I7 529 aaPredicted RBP12.04□□□□□ -0.48
NEIL1-202ENST00000561643 TBC1D5Q92609 795 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 SYN2Q92777 582 aaPredicted RBP12.04□□□□□ -0.48
NEIL1-202ENST00000561643 TLR10Q9BXR5 811 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 FAM107BQ9H098 131 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 PCDHA2Q9Y5H9 948 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 MYH10P35580 1976 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 GOLGA6BA6NDN3 693 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 PRPF6O94906 941 aaKnown RBP12.04□□□□□ -0.48
NEIL1-202ENST00000561643 APBA3O96018 575 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 NR2F2P24468 414 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 USP8P40818 1118 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 CRKP46108 304 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 RBM5P52756 815 aaKnown RBP eCLIP12.04□□□□□ -0.481e-6■□□□□ 9.9
NEIL1-202ENST00000561643 CERKLQ49MI3 558 aaPredicted RBP12.04□□□□□ -0.48
NEIL1-202ENST00000561643 KLHDC7AQ5VTJ3 777 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 GBP6Q6ZN66 633 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 AENQ8WTP8 325 aaKnown RBP12.04□□□□□ -0.48
NEIL1-202ENST00000561643 KCTD10Q9H3F6 313 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 DNAJC18Q9H819 358 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 TSKSQ9UJT2 592 aa12.04□□□□□ -0.48
NEIL1-202ENST00000561643 MEIS1O00470 390 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 INPP5BP32019 993 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 SNAP25P60880 206 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 ARHGAP4P98171 946 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 KLHL30Q0D2K2 578 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 C8orf74Q6P047 294 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 FAM133AQ8N9E0 248 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 ERMNQ8TAM6 284 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 DCAF4Q8WV16 495 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 DHX36Q9H2U1 1008 aaKnown RBP12.03□□□□□ -0.48
NEIL1-202ENST00000561643 SAMM50Q9Y512 469 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 C10orf71Q711Q0 1435 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 RBAK-RBAKDNI3L0D1 243 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 PABPC4Q13310 644 aaKnown RBP eCLIP12.03□□□□□ -0.48
NEIL1-202ENST00000561643 KIAA0825Q8IV33 1275 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 MS4A14Q96JA4 679 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 CAPN7Q9Y6W3 813 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 ZC3H4Q9UPT8 1303 aaKnown RBP12.03□□□□□ -0.48
NEIL1-202ENST00000561643 MYO1FO00160 1098 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 PALMO75781 387 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 SLC12A3P55017 1021 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 MARSP56192 900 aaKnown RBP12.03□□□□□ -0.48
NEIL1-202ENST00000561643 KCNH2Q12809 1159 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 AP3B2Q13367 1082 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 ASIC2Q16515 512 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 USH1GQ495M9 461 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 CFAP221Q4G0U5 840 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 ARSHQ5FYA8 562 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 SLC27A3Q5K4L6 730 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 PPP4R3CPQ6ZMV5 832 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 CATSPER3Q86XQ3 398 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 GIMAP7Q8NHV1 300 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 STIM2Q9P246 746 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 ADAMTS1Q9UHI8 967 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 DNM3Q9UQ16 869 aa12.03□□□□□ -0.48
NEIL1-202ENST00000561643 UBR3Q6ZT12 1888 aa12.02□□□□□ -0.48
NEIL1-202ENST00000561643 CYP3A7-CYP3A51PA0A087WV96 503 aa12.02□□□□□ -0.48
NEIL1-202ENST00000561643 SPDYE3A6NKU9 549 aa12.02□□□□□ -0.48
NEIL1-202ENST00000561643 MEIS2O14770 477 aa12.02□□□□□ -0.48
NEIL1-202ENST00000561643 FTCDO95954 541 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms