RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 TET1Q8NFU7 2136 aa23.47■■□□□ 1.35
TPM1-232ENST00000561425 CYP3A7-CYP3A51PA0A087WV96 503 aa23.47■■□□□ 1.35
TPM1-232ENST00000561425 FDPSP14324 419 aaKnown RBP23.47■■□□□ 1.35
TPM1-232ENST00000561425 ATP2A2P16615 1042 aaKnown RBP23.47■■□□□ 1.35
TPM1-232ENST00000561425 CYP3A7P24462 503 aa23.47■■□□□ 1.35
TPM1-232ENST00000561425 SLC26A2P50443 739 aa23.47■■□□□ 1.35
TPM1-232ENST00000561425 NEK4P51957 841 aa23.47■■□□□ 1.35
TPM1-232ENST00000561425 PPFIA1Q13136 1202 aa23.47■■□□□ 1.35
TPM1-232ENST00000561425 SLC9A7Q96T83 725 aa23.47■■□□□ 1.35
TPM1-232ENST00000561425 ZNF577Q9BSK1 485 aa23.47■■□□□ 1.35
TPM1-232ENST00000561425 YBX2Q9Y2T7 364 aaKnown RBP23.47■■□□□ 1.35
TPM1-232ENST00000561425 PCDHA11Q9Y5I1 949 aa23.47■■□□□ 1.35
TPM1-232ENST00000561425 ABHD14A-ACY1A0A1B0GW23 586 aa23.46■■□□□ 1.35
TPM1-232ENST00000561425 RRN3P2A6NIE6 340 aa23.46■■□□□ 1.35
TPM1-232ENST00000561425 ZBBXA8MT70 800 aa23.46■■□□□ 1.35
TPM1-232ENST00000561425 LARGE1O95461 756 aa23.46■■□□□ 1.35
TPM1-232ENST00000561425 MARK3P27448 753 aa23.46■■□□□ 1.35
TPM1-232ENST00000561425 PLCB4Q15147 1175 aa23.46■■□□□ 1.35
TPM1-232ENST00000561425 GRIK4Q16099 956 aa23.46■■□□□ 1.35
TPM1-232ENST00000561425 PRR16Q569H4 304 aa23.46■■□□□ 1.35
TPM1-232ENST00000561425 TAF2Q6P1X5 1199 aa23.46■■□□□ 1.35
TPM1-232ENST00000561425 GTF3C6Q969F1 213 aa23.46■■□□□ 1.35
TPM1-232ENST00000561425 MBOAT7Q96N66 472 aa23.46■■□□□ 1.35
TPM1-232ENST00000561425 KIF2CQ99661 725 aa23.46■■□□□ 1.35
TPM1-232ENST00000561425 AZI2Q9H6S1 392 aa23.46■■□□□ 1.35
TPM1-232ENST00000561425 MSRAQ9UJ68 235 aa23.46■■□□□ 1.35
TPM1-232ENST00000561425 INSRRP14616 1297 aa23.45■■□□□ 1.34
TPM1-232ENST00000561425 GRIN2CQ14957 1233 aa23.45■■□□□ 1.34
TPM1-232ENST00000561425 PLEKHG4Q58EX7 1191 aa23.45■■□□□ 1.34
TPM1-232ENST00000561425 ZNF746Q6NUN9 644 aaPredicted RBP23.45■■□□□ 1.34
TPM1-232ENST00000561425 MOXD1Q6UVY6 613 aa23.45■■□□□ 1.34
TPM1-232ENST00000561425 TBCKQ8TEA7 893 aa23.45■■□□□ 1.34
TPM1-232ENST00000561425 TNPO1Q92973 898 aaKnown RBP23.45■■□□□ 1.34
TPM1-232ENST00000561425 RABGGTBP53611 331 aa23.44■■□□□ 1.34
TPM1-232ENST00000561425 WDR5P61964 334 aaKnown RBP23.44■■□□□ 1.34
TPM1-232ENST00000561425 Q4G0T1 1027 aa23.44■■□□□ 1.34
TPM1-232ENST00000561425 RUFY4Q6ZNE9 571 aa23.44■■□□□ 1.34
TPM1-232ENST00000561425 NECAB1Q8N987 351 aa23.44■■□□□ 1.34
TPM1-232ENST00000561425 OSBPL7Q9BZF2 842 aa23.44■■□□□ 1.34
TPM1-232ENST00000561425 KCNJ14Q9UNX9 436 aa23.44■■□□□ 1.34
TPM1-232ENST00000561425 MAFBQ9Y5Q3 323 aaPredicted RBP23.44■■□□□ 1.34
TPM1-232ENST00000561425 MSH4O15457 936 aa23.43■■□□□ 1.34
TPM1-232ENST00000561425 EFCAB14O75071 495 aa23.43■■□□□ 1.34
TPM1-232ENST00000561425 CHRNA1P02708 482 aa23.43■■□□□ 1.34
TPM1-232ENST00000561425 ATP4AP20648 1035 aa23.43■■□□□ 1.34
TPM1-232ENST00000561425 KRT76Q01546 638 aa23.43■■□□□ 1.34
TPM1-232ENST00000561425 MGAT3Q09327 533 aa23.43■■□□□ 1.34
TPM1-232ENST00000561425 HERC6Q8IVU3 1022 aa23.43■■□□□ 1.34
TPM1-232ENST00000561425 CCDC60Q8IWA6 550 aaPredicted RBP23.43■■□□□ 1.34
TPM1-232ENST00000561425 SMAP1Q8IYB5 467 aaPredicted RBP23.43■■□□□ 1.34
TPM1-232ENST00000561425 DBF4BQ8NFT6 615 aa23.43■■□□□ 1.34
TPM1-232ENST00000561425 SLC5A5Q92911 643 aa23.43■■□□□ 1.34
TPM1-232ENST00000561425 RIT2Q99578 217 aa23.43■■□□□ 1.34
TPM1-232ENST00000561425 ORC3Q9UBD5 711 aaPredicted RBP23.43■■□□□ 1.34
TPM1-232ENST00000561425 TUBE1Q9UJT0 475 aa23.43■■□□□ 1.34
TPM1-232ENST00000561425 DDX39AO00148 427 aaKnown RBP23.42■■□□□ 1.34
TPM1-232ENST00000561425 ST3GAL1Q11201 340 aa23.42■■□□□ 1.34
TPM1-232ENST00000561425 IKBKEQ14164 716 aa23.42■■□□□ 1.34
TPM1-232ENST00000561425 MIS18BP1Q6P0N0 1132 aa23.42■■□□□ 1.34
TPM1-232ENST00000561425 NSUN7Q8NE18 718 aaKnown RBP23.42■■□□□ 1.34
TPM1-232ENST00000561425 NKX2-4Q9H2Z4 354 aa23.42■■□□□ 1.34
TPM1-232ENST00000561425 PCDHA2Q9Y5H9 948 aa23.42■■□□□ 1.34
TPM1-232ENST00000561425 POTEB3A0JP26 581 aa23.41■■□□□ 1.34
TPM1-232ENST00000561425 HBP1O60381 514 aa23.41■■□□□ 1.34
TPM1-232ENST00000561425 RPLP2P05387 115 aaKnown RBP23.41■■□□□ 1.34
TPM1-232ENST00000561425 MYOGP15173 224 aa23.41■■□□□ 1.34
TPM1-232ENST00000561425 XBP1P17861 261 aa23.41■■□□□ 1.34
TPM1-232ENST00000561425 FAM160B1Q5W0V3 765 aa23.41■■□□□ 1.34
TPM1-232ENST00000561425 SWSAP1Q6NVH7 229 aa23.41■■□□□ 1.34
TPM1-232ENST00000561425 POTEBQ6S5H4 581 aa23.41■■□□□ 1.34
TPM1-232ENST00000561425 B3GNT9Q6UX72 402 aa23.41■■□□□ 1.34
TPM1-232ENST00000561425 KRT25Q7Z3Z0 450 aa23.41■■□□□ 1.34
TPM1-232ENST00000561425 ATP8B4Q8TF62 1192 aa23.41■■□□□ 1.34
TPM1-232ENST00000561425 MYLIPQ8WY64 445 aa23.41■■□□□ 1.34
TPM1-232ENST00000561425 WASF1Q92558 559 aa23.41■■□□□ 1.34
TPM1-232ENST00000561425 UIMC1Q96RL1 719 aa23.41■■□□□ 1.34
TPM1-232ENST00000561425 ZNF302Q9NR11 478 aa23.41■■□□□ 1.34
TPM1-232ENST00000561425 GJB4Q9NTQ9 266 aa23.41■■□□□ 1.34
TPM1-232ENST00000561425 PCDHA10Q9Y5I2 948 aa23.41■■□□□ 1.34
TPM1-232ENST00000561425 DTNBO60941 627 aa23.4■■□□□ 1.34
TPM1-232ENST00000561425 PSMD10O75832 226 aa23.4■■□□□ 1.34
TPM1-232ENST00000561425 RBM25P49756 843 aaKnown RBP23.4■■□□□ 1.34
TPM1-232ENST00000561425 NONOQ15233 471 aaKnown RBP eCLIP23.4■■□□□ 1.34
TPM1-232ENST00000561425 SLC28A3Q9HAS3 691 aa23.4■■□□□ 1.34
TPM1-232ENST00000561425 ZBTB42B2RXF5 422 aa23.39■■□□□ 1.33
TPM1-232ENST00000561425 RBAK-RBAKDNI3L0D1 243 aa23.39■■□□□ 1.33
TPM1-232ENST00000561425 TDP2O95551 362 aa23.39■■□□□ 1.33
TPM1-232ENST00000561425 DEFB103AP81534 67 aa23.39■■□□□ 1.33
TPM1-232ENST00000561425 DNAJB3Q8WWF6 145 aa23.39■■□□□ 1.33
TPM1-232ENST00000561425 TNFRSF25Q93038 417 aa23.39■■□□□ 1.33
TPM1-232ENST00000561425 LIMCH1Q9UPQ0 1083 aa23.39■■□□□ 1.33
TPM1-232ENST00000561425 TRPC6Q9Y210 931 aa23.39■■□□□ 1.33
TPM1-232ENST00000561425 COL6A3P12111 3177 aa23.38■■□□□ 1.33
TPM1-232ENST00000561425 BACH1O14867 736 aa23.38■■□□□ 1.33
TPM1-232ENST00000561425 PSAPP07602 524 aa23.38■■□□□ 1.33
TPM1-232ENST00000561425 CTSHP09668 335 aa23.38■■□□□ 1.33
TPM1-232ENST00000561425 KCNJ6P48051 423 aa23.38■■□□□ 1.33
TPM1-232ENST00000561425 IGBP1P78318 339 aa23.38■■□□□ 1.33
TPM1-232ENST00000561425 PDXDC2PQ6P474 469 aa23.38■■□□□ 1.33
TPM1-232ENST00000561425 MTHFD1LQ6UB35 978 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms