RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 DGKIO75912 1065 aa13.58□□□□□ -0.24
CARMIL3-204ENST00000561354 MTMR1Q13613 665 aa13.58□□□□□ -0.24
CARMIL3-204ENST00000561354 FBXO47Q5MNV8 452 aa13.58□□□□□ -0.24
CARMIL3-204ENST00000561354 CASC1Q6TDU7 716 aa13.58□□□□□ -0.24
CARMIL3-204ENST00000561354 TSHZ1Q6ZSZ6 1077 aa13.58□□□□□ -0.24
CARMIL3-204ENST00000561354 EP400NLQ6ZTU2 488 aa13.58□□□□□ -0.24
CARMIL3-204ENST00000561354 ADHFE1Q8IWW8 467 aa13.58□□□□□ -0.24
CARMIL3-204ENST00000561354 SRBD1Q8N5C6 995 aaKnown RBP13.58□□□□□ -0.24
CARMIL3-204ENST00000561354 DNAJB3Q8WWF6 145 aa13.58□□□□□ -0.24
CARMIL3-204ENST00000561354 GLG1Q92896 1179 aa13.58□□□□□ -0.24
CARMIL3-204ENST00000561354 TMEM87BQ96K49 555 aa13.58□□□□□ -0.24
CARMIL3-204ENST00000561354 JADE2Q9NQC1 790 aa13.58□□□□□ -0.24
CARMIL3-204ENST00000561354 RBM8AQ9Y5S9 174 aaKnown RBP13.58□□□□□ -0.24
CARMIL3-204ENST00000561354 SQORQ9Y6N5 450 aa13.58□□□□□ -0.24
CARMIL3-204ENST00000561354 TTC3P53804 2025 aa13.57□□□□□ -0.24
CARMIL3-204ENST00000561354 RRN3P2A6NIE6 340 aa13.57□□□□□ -0.24
CARMIL3-204ENST00000561354 SPDYE3A6NKU9 549 aa13.57□□□□□ -0.24
CARMIL3-204ENST00000561354 PRC1O43663 620 aa13.57□□□□□ -0.24
CARMIL3-204ENST00000561354 PLEKHA8P1O95397 391 aa13.57□□□□□ -0.24
CARMIL3-204ENST00000561354 CALM1P0DP23 149 aa13.57□□□□□ -0.24
CARMIL3-204ENST00000561354 CALM2P0DP24 149 aa13.57□□□□□ -0.24
CARMIL3-204ENST00000561354 CALM3P0DP25 149 aa13.57□□□□□ -0.24
CARMIL3-204ENST00000561354 MARK3P27448 753 aa13.57□□□□□ -0.24
CARMIL3-204ENST00000561354 MCM5P33992 734 aa13.57□□□□□ -0.24
CARMIL3-204ENST00000561354 LIFRP42702 1097 aa13.57□□□□□ -0.24
CARMIL3-204ENST00000561354 MRPS6P82932 125 aaKnown RBP13.57□□□□□ -0.24
CARMIL3-204ENST00000561354 BTG3Q14201 252 aaPredicted RBP13.57□□□□□ -0.24
CARMIL3-204ENST00000561354 CSPP1Q1MSJ5 1256 aa13.57□□□□□ -0.24
CARMIL3-204ENST00000561354 IER5Q5VY09 327 aa13.57□□□□□ -0.24
CARMIL3-204ENST00000561354 CRIPAKQ8N1N5 446 aa13.57□□□□□ -0.24
CARMIL3-204ENST00000561354 TNPO1Q92973 898 aaKnown RBP13.57□□□□□ -0.24
CARMIL3-204ENST00000561354 FTHL17Q9BXU8 183 aa13.57□□□□□ -0.24
CARMIL3-204ENST00000561354 CDY2AQ9Y6F7 541 aa13.57□□□□□ -0.24
CARMIL3-204ENST00000561354 CCDC69A6NI79 296 aa13.56□□□□□ -0.24
CARMIL3-204ENST00000561354 SH2B2O14492 632 aaPredicted RBP13.56□□□□□ -0.24
CARMIL3-204ENST00000561354 MMP1P03956 469 aa13.56□□□□□ -0.24
CARMIL3-204ENST00000561354 INSRRP14616 1297 aa13.56□□□□□ -0.24
CARMIL3-204ENST00000561354 HYAL1Q12794 435 aa13.56□□□□□ -0.24
CARMIL3-204ENST00000561354 SMAD2Q15796 467 aaKnown RBP13.56□□□□□ -0.24
CARMIL3-204ENST00000561354 NAALADL2Q58DX5 795 aa13.56□□□□□ -0.24
CARMIL3-204ENST00000561354 NFXL1Q6ZNB6 911 aa13.56□□□□□ -0.24
CARMIL3-204ENST00000561354 TEX2Q8IWB9 1127 aa13.56□□□□□ -0.24
CARMIL3-204ENST00000561354 P2RX5Q93086 422 aa13.56□□□□□ -0.24
CARMIL3-204ENST00000561354 UPF3BQ9BZI7 483 aaKnown RBP13.56□□□□□ -0.24
CARMIL3-204ENST00000561354 AGO3Q9H9G7 860 aaKnown RBP13.56□□□□□ -0.24
CARMIL3-204ENST00000561354 PCDHA6Q9UN73 950 aa13.56□□□□□ -0.24
CARMIL3-204ENST00000561354 PLAGL2Q9UPG8 496 aa13.56□□□□□ -0.24
CARMIL3-204ENST00000561354 PCDHA8Q9Y5H6 950 aa13.56□□□□□ -0.24
CARMIL3-204ENST00000561354 MYO7AQ13402 2215 aa13.56□□□□□ -0.24
CARMIL3-204ENST00000561354 MBTPS2O43462 519 aa13.55□□□□□ -0.24
CARMIL3-204ENST00000561354 IRS1P35568 1242 aa13.55□□□□□ -0.24
CARMIL3-204ENST00000561354 DLX2Q07687 328 aaPredicted RBP13.55□□□□□ -0.24
CARMIL3-204ENST00000561354 CAMK1Q14012 370 aa13.55□□□□□ -0.24
CARMIL3-204ENST00000561354 FAM43BQ6ZT52 329 aaPredicted RBP13.55□□□□□ -0.24
CARMIL3-204ENST00000561354 RTN4RL1Q86UN2 441 aaPredicted RBP13.55□□□□□ -0.24
CARMIL3-204ENST00000561354 CMTR2Q8IYT2 770 aaKnown RBP13.55□□□□□ -0.24
CARMIL3-204ENST00000561354 CMTR1Q8N1G2 835 aaKnown RBP13.55□□□□□ -0.24
CARMIL3-204ENST00000561354 LINC01599Q8WXQ3 324 aa13.55□□□□□ -0.24
CARMIL3-204ENST00000561354 PCYT2Q99447 389 aa13.55□□□□□ -0.24
CARMIL3-204ENST00000561354 POP1Q99575 1024 aaKnown RBP13.55□□□□□ -0.24
CARMIL3-204ENST00000561354 KCNH6Q9H252 994 aa13.55□□□□□ -0.24
CARMIL3-204ENST00000561354 JPH1Q9HDC5 661 aaPredicted RBP13.55□□□□□ -0.24
CARMIL3-204ENST00000561354 PKD2L1Q9P0L9 805 aa13.55□□□□□ -0.24
CARMIL3-204ENST00000561354 SLC9A2Q9UBY0 812 aa13.55□□□□□ -0.24
CARMIL3-204ENST00000561354 ATG2AQ2TAZ0 1938 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 M0QZ92 97 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 RXRAP19793 462 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 CD52P31358 61 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 IGBP1P78318 339 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 ADAM15Q13444 863 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 SMAD4Q13485 552 aaKnown RBP13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 UBE2SQ16763 222 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 PLPPR4Q7Z2D5 763 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 NPAS4Q8IUM7 802 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 FANCBQ8NB91 859 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 PPP2R3CQ969Q6 453 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 UIMC1Q96RL1 719 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 MXRA8Q9BRK3 442 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 FAM49AQ9H0Q0 323 aaPredicted RBP13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 AZI2Q9H6S1 392 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 ALG13Q9NP73 1137 aaKnown RBP13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 KCNH7Q9NS40 1196 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 PCDHA2Q9Y5H9 948 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 TRPV2Q9Y5S1 764 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 SLC12A7Q9Y666 1083 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 MRPL42Q9Y6G3 142 aaKnown RBP13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 NFASCO94856 1347 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 IGSF9BQ9UPX0 1349 aa13.54□□□□□ -0.24
CARMIL3-204ENST00000561354 TBX10O75333 385 aa13.53□□□□□ -0.24
CARMIL3-204ENST00000561354 STAG3L1P0CL83 205 aa13.53□□□□□ -0.24
CARMIL3-204ENST00000561354 PLCB4Q15147 1175 aa13.53□□□□□ -0.24
CARMIL3-204ENST00000561354 TMTC3Q6ZXV5 915 aa13.53□□□□□ -0.24
CARMIL3-204ENST00000561354 SGMS1Q86VZ5 419 aa13.53□□□□□ -0.24
CARMIL3-204ENST00000561354 NME8Q8N427 588 aa13.53□□□□□ -0.24
CARMIL3-204ENST00000561354 SDF4Q9BRK5 362 aa13.53□□□□□ -0.24
CARMIL3-204ENST00000561354 CELF4Q9BZC1 486 aaKnown RBP13.53□□□□□ -0.24
CARMIL3-204ENST00000561354 LSG1Q9H089 658 aaKnown RBP13.53□□□□□ -0.24
CARMIL3-204ENST00000561354 CD207Q9UJ71 328 aa13.53□□□□□ -0.24
CARMIL3-204ENST00000561354 PADI3Q9ULW8 664 aa13.53□□□□□ -0.24
CARMIL3-204ENST00000561354 TRPC6Q9Y210 931 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms