RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 EPC2Q52LR7 807 aa30.92■■■□□ 2.54
SNRPA1-215ENST00000561187 TRAPPC12Q8WVT3 735 aa30.92■■■□□ 2.54
SNRPA1-215ENST00000561187 APBB2Q92870 758 aa30.92■■■□□ 2.54
SNRPA1-215ENST00000561187 UIMC1Q96RL1 719 aa30.92■■■□□ 2.54
SNRPA1-215ENST00000561187 LMCD1Q9NZU5 365 aa30.92■■■□□ 2.54
SNRPA1-215ENST00000561187 CDY2AQ9Y6F7 541 aa30.92■■■□□ 2.54
SNRPA1-215ENST00000561187 DDX39AO00148 427 aaKnown RBP30.91■■■□□ 2.54
SNRPA1-215ENST00000561187 FGD1P98174 961 aa30.91■■■□□ 2.54
SNRPA1-215ENST00000561187 MGAT3Q09327 533 aa30.91■■■□□ 2.54
SNRPA1-215ENST00000561187 LPIN1Q14693 890 aa30.91■■■□□ 2.54
SNRPA1-215ENST00000561187 MARCH8Q5T0T0 291 aa30.91■■■□□ 2.54
SNRPA1-215ENST00000561187 SDF4Q9BRK5 362 aa30.91■■■□□ 2.54
SNRPA1-215ENST00000561187 NLRC5Q86WI3 1866 aa30.91■■■□□ 2.54
SNRPA1-215ENST00000561187 SMCO2A6NFE2 343 aa30.9■■■□□ 2.54
SNRPA1-215ENST00000561187 INSRRP14616 1297 aa30.9■■■□□ 2.54
SNRPA1-215ENST00000561187 TMEM62Q0P6H9 643 aa30.9■■■□□ 2.54
SNRPA1-215ENST00000561187 PPP1R18Q6NYC8 613 aa30.9■■■□□ 2.54
SNRPA1-215ENST00000561187 RSPH3Q86UC2 560 aa30.9■■■□□ 2.54
SNRPA1-215ENST00000561187 AZI2Q9H6S1 392 aa30.9■■■□□ 2.54
SNRPA1-215ENST00000561187 CSPG5O95196 566 aa30.89■■■□□ 2.54
SNRPA1-215ENST00000561187 COL9A1P20849 921 aa30.89■■■□□ 2.54
SNRPA1-215ENST00000561187 ACTR2P61160 394 aa30.89■■■□□ 2.54
SNRPA1-215ENST00000561187 ITGB3BPQ13352 177 aaPredicted RBP30.89■■■□□ 2.54
SNRPA1-215ENST00000561187 UBE2ZQ9H832 354 aaPredicted RBP30.89■■■□□ 2.54
SNRPA1-215ENST00000561187 FAM217BQ9NTX9 383 aaPredicted RBP30.89■■■□□ 2.54
SNRPA1-215ENST00000561187 MBLAC1A4D2B0 266 aaPredicted RBP30.88■■■□□ 2.53
SNRPA1-215ENST00000561187 APOBRQ0VD83 1088 aa30.88■■■□□ 2.53
SNRPA1-215ENST00000561187 JAKMIP3Q5VZ66 844 aa30.88■■■□□ 2.53
SNRPA1-215ENST00000561187 TMEM192Q8IY95 271 aa30.88■■■□□ 2.53
SNRPA1-215ENST00000561187 BARHL2Q9NY43 387 aa30.88■■■□□ 2.53
SNRPA1-215ENST00000561187 MAFGO15525 162 aa30.87■■■□□ 2.53
SNRPA1-215ENST00000561187 KCNA5P22460 613 aa30.87■■■□□ 2.53
SNRPA1-215ENST00000561187 ZNF76P36508 570 aa30.87■■■□□ 2.53
SNRPA1-215ENST00000561187 MRPS6P82932 125 aaKnown RBP30.87■■■□□ 2.53
SNRPA1-215ENST00000561187 GPM6BQ13491 265 aa30.87■■■□□ 2.53
SNRPA1-215ENST00000561187 KRT32Q14532 448 aa30.87■■■□□ 2.53
SNRPA1-215ENST00000561187 PLCB4Q15147 1175 aa30.87■■■□□ 2.53
SNRPA1-215ENST00000561187 CEP55Q53EZ4 464 aa30.87■■■□□ 2.53
SNRPA1-215ENST00000561187 FBXO47Q5MNV8 452 aa30.87■■■□□ 2.53
SNRPA1-215ENST00000561187 AGO4Q9HCK5 861 aaKnown RBP30.87■■■□□ 2.53
SNRPA1-215ENST00000561187 PPFIA3O75145 1194 aa30.86■■■□□ 2.53
SNRPA1-215ENST00000561187 CD52P31358 61 aa30.86■■■□□ 2.53
SNRPA1-215ENST00000561187 CTNNB1P35222 781 aa30.86■■■□□ 2.53
SNRPA1-215ENST00000561187 ADD1P35611 737 aaKnown RBP30.86■■■□□ 2.53
SNRPA1-215ENST00000561187 METAP2P50579 478 aaKnown RBP eCLIP30.86■■■□□ 2.53
SNRPA1-215ENST00000561187 RPAINQ86UA6 219 aa30.86■■■□□ 2.53
SNRPA1-215ENST00000561187 JAKMIP1Q96N16 626 aaKnown RBP30.86■■■□□ 2.53
SNRPA1-215ENST00000561187 MYO7AQ13402 2215 aa30.85■■■□□ 2.53
SNRPA1-215ENST00000561187 ADAMTS3O15072 1205 aa30.85■■■□□ 2.53
SNRPA1-215ENST00000561187 FOSP01100 380 aaPredicted RBP30.85■■■□□ 2.53
SNRPA1-215ENST00000561187 IBSPP21815 317 aaPredicted RBP30.85■■■□□ 2.53
SNRPA1-215ENST00000561187 TSGA10IPQ3SY00 556 aa30.85■■■□□ 2.53
SNRPA1-215ENST00000561187 Q6ZUG5 572 aa30.85■■■□□ 2.53
SNRPA1-215ENST00000561187 MRPL38Q96DV4 380 aaKnown RBP30.85■■■□□ 2.53
SNRPA1-215ENST00000561187 IL17RAQ96F46 866 aa30.85■■■□□ 2.53
SNRPA1-215ENST00000561187 SAMD11Q96NU1 681 aa30.85■■■□□ 2.53
SNRPA1-215ENST00000561187 AGO3Q9H9G7 860 aaKnown RBP30.85■■■□□ 2.53
SNRPA1-215ENST00000561187 NFASCO94856 1347 aa30.84■■■□□ 2.53
SNRPA1-215ENST00000561187 SREBF1P36956 1147 aa30.84■■■□□ 2.53
SNRPA1-215ENST00000561187 STAT5BP51692 787 aa30.84■■■□□ 2.53
SNRPA1-215ENST00000561187 PTPROQ16827 1216 aa30.84■■■□□ 2.53
SNRPA1-215ENST00000561187 TSHZ1Q6ZSZ6 1077 aa30.84■■■□□ 2.53
SNRPA1-215ENST00000561187 EP400NLQ6ZTU2 488 aa30.84■■■□□ 2.53
SNRPA1-215ENST00000561187 FIBCD1Q8N539 461 aa30.84■■■□□ 2.53
SNRPA1-215ENST00000561187 BRF1Q92994 677 aa30.84■■■□□ 2.53
SNRPA1-215ENST00000561187 RRN3P2A6NIE6 340 aa30.83■■■□□ 2.53
SNRPA1-215ENST00000561187 hCG_1984214I3L0E3 225 aa30.83■■■□□ 2.53
SNRPA1-215ENST00000561187 BACH1O14867 736 aa30.83■■■□□ 2.53
SNRPA1-215ENST00000561187 CLK2P49760 499 aaKnown RBP30.83■■■□□ 2.53
SNRPA1-215ENST00000561187 AP3B2Q13367 1082 aa30.83■■■□□ 2.53
SNRPA1-215ENST00000561187 ZNF713Q8N859 430 aaPredicted RBP30.83■■■□□ 2.53
SNRPA1-215ENST00000561187 LINC01599Q8WXQ3 324 aa30.83■■■□□ 2.53
SNRPA1-215ENST00000561187 COL4A6Q14031 1691 aa30.83■■■□□ 2.53
SNRPA1-215ENST00000561187 ADGRA3Q8IWK6 1321 aa30.82■■■□□ 2.52
SNRPA1-215ENST00000561187 H3BNC9 293 aa30.82■■■□□ 2.52
SNRPA1-215ENST00000561187 CCNE2O96020 404 aa30.82■■■□□ 2.52
SNRPA1-215ENST00000561187 TRPV2Q9Y5S1 764 aa30.82■■■□□ 2.52
SNRPA1-215ENST00000561187 LOXHD1Q8IVV2 1947 aa30.82■■■□□ 2.52
SNRPA1-215ENST00000561187 RALGAPA2Q2PPJ7 1873 aa30.82■■■□□ 2.52
SNRPA1-215ENST00000561187 POTEB3A0JP26 581 aa30.81■■■□□ 2.52
SNRPA1-215ENST00000561187 FAM86B1E9PN63 330 aa30.81■■■□□ 2.52
SNRPA1-215ENST00000561187 M0QZ92 97 aa30.81■■■□□ 2.52
SNRPA1-215ENST00000561187 MEIS1O00470 390 aa30.81■■■□□ 2.52
SNRPA1-215ENST00000561187 ENPP3O14638 875 aa30.81■■■□□ 2.52
SNRPA1-215ENST00000561187 FAM86B2P0C5J1 330 aa30.81■■■□□ 2.52
SNRPA1-215ENST00000561187 PFKFB3Q16875 520 aaPredicted RBP30.81■■■□□ 2.52
SNRPA1-215ENST00000561187 TIGD5Q53EQ6 642 aa30.81■■■□□ 2.52
SNRPA1-215ENST00000561187 TCEAL5Q5H9L2 206 aa30.81■■■□□ 2.52
SNRPA1-215ENST00000561187 POTEBQ6S5H4 581 aa30.81■■■□□ 2.52
SNRPA1-215ENST00000561187 PLA2G4DQ86XP0 818 aa30.81■■■□□ 2.52
SNRPA1-215ENST00000561187 BANK1Q8NDB2 785 aa30.81■■■□□ 2.52
SNRPA1-215ENST00000561187 H3BQ06 376 aaPredicted RBP30.8■■■□□ 2.52
SNRPA1-215ENST00000561187 HMGB1P09429 215 aaKnown RBP30.8■■■□□ 2.52
SNRPA1-215ENST00000561187 SCG2P13521 617 aa30.8■■■□□ 2.52
SNRPA1-215ENST00000561187 TRMT1LQ7Z2T5 733 aaKnown RBP30.8■■■□□ 2.52
SNRPA1-215ENST00000561187 PHKBQ93100 1093 aa30.8■■■□□ 2.52
SNRPA1-215ENST00000561187 EPHX3Q9H6B9 360 aa30.8■■■□□ 2.52
SNRPA1-215ENST00000561187 GINS2Q9Y248 185 aa30.8■■■□□ 2.52
SNRPA1-215ENST00000561187 SNX14Q9Y5W7 946 aa30.8■■■□□ 2.52
SNRPA1-215ENST00000561187 TMEM266Q2M3C6 531 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms