RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 FHOD1Q9Y613 1164 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 ERBB4Q15303 1308 aa2.36□□□□□ -2.03
RTF1-207ENST00000561076 ASXL2Q76L83 1435 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 TRBV23OR9-2A0A075B6M9 112 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 A0A1B0GVC2 190 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 A0A1W2PPL8 197 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 LINC01387J3KSC0 135 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 J3QL48 77 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 FZD9O00144 591 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 STXBP3O00186 592 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 ARVCFO00192 962 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 DDX3XO00571 662 aaKnown RBP eCLIP2.35□□□□□ -2.03
RTF1-207ENST00000561076 APOL1O14791 398 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 EFSO43281 561 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 B3GALT2O43825 422 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 ZNF862O60290 1169 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 PCDHGA12O60330 932 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 AOC2O75106 756 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 HMMRO75330 724 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 TBC1D8O95759 1140 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 CYP17A1P05093 508 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 SCG5P05408 212 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 GNAT1P11488 350 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 BMP4P12644 408 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 OSMP13725 252 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 SLC9A1P19634 815 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 MX2P20592 715 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 EPHA1P21709 976 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 FGFR3P22607 806 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 CYP7A1P22680 504 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 CNTFP26441 200 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 OAS2P29728 719 aaKnown RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 ADD2P35612 726 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 RAD52P43351 418 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 RXRGP48443 463 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 PAPOLAP51003 745 aaKnown RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 KIF11P52732 1056 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 ATXN1P54253 815 aaKnown RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 NLRP12P59046 1061 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 ZNF445P59923 1031 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 ARF3P61204 181 aaPredicted RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 ARF1P84077 181 aaKnown RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 IRF9Q00978 393 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 SRSF2Q01130 221 aaKnown RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 ALDH6A1Q02252 535 aaKnown RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 TRPC3Q13507 836 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 GALEQ14376 348 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 SMC1AQ14683 1233 aaKnown RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.35□□□□□ -2.03
RTF1-207ENST00000561076 SLC35F1Q5T1Q4 408 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 ZBTB37Q5TC79 503 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 PRAMEF13Q5VWM6 474 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 E4F1Q66K89 784 aaPredicted RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 CIAPIN1Q6FI81 312 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 TIGD7Q6NT04 549 aaPredicted RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 SWSAP1Q6NVH7 229 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 MRPL14Q6P1L8 145 aaKnown RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 FBXO38Q6PIJ6 1188 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 TXNDC11Q6PKC3 985 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 APOA5Q6Q788 366 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 FAM180AQ6UWF9 173 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 NPNTQ6UXI9 565 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 LBX2Q6XYB7 198 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 C1orf122Q6ZSJ8 110 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 C16orf59Q7L2K0 433 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 ARMCX6Q7L4S7 300 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 OVCH2Q7RTZ1 564 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 SYT9Q86SS6 491 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 LIX1LQ8IVB5 337 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 MAP4K3Q8IVH8 894 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.35□□□□□ -2.03
RTF1-207ENST00000561076 NDUFAF2Q8N183 169 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 THEMISQ8N1K5 641 aaPredicted RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 KRT78Q8N1N4 520 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 ESX1Q8N693 406 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 USHBP1Q8N6Y0 703 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 ZNF610Q8N9Z0 462 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 MFSD2AQ8NA29 543 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 ATG16L2Q8NAA4 619 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 IL17REQ8NFR9 667 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 SYTL5Q8TDW5 730 aaPredicted RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 LMBR1Q8WVP7 490 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 PHKBQ93100 1093 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 ABHD17AQ96GS6 310 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 TMEM41AQ96HV5 264 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 RAX2Q96IS3 184 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 ANP32EQ9BTT0 268 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 KLF16Q9BXK1 252 aaPredicted RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 FOXQ1Q9C009 403 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 SENP6Q9GZR1 1112 aaPredicted RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 BTBD1Q9H0C5 482 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 CCDC68Q9H2F9 335 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 PDCL3Q9H2J4 239 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 BHMT2Q9H2M3 363 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 ZWILCHQ9H900 591 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 JMJD4Q9H9V9 463 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 RSAD1Q9HA92 442 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 ATP6V0A4Q9HBG4 840 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 ACSS2Q9NR19 701 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 KRT84Q9NSB2 600 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms