RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 CACNB1Q02641 598 aaPredicted RBP14.32□□□□□ -0.12
SNX1-211ENST00000560829 LRRC41Q15345 812 aa14.32□□□□□ -0.12
SNX1-211ENST00000560829 EPM2AIP1Q7L775 607 aaPredicted RBP14.32□□□□□ -0.12
SNX1-211ENST00000560829 C17orf53Q8N3J3 647 aaPredicted RBP14.32□□□□□ -0.12
SNX1-211ENST00000560829 ZNF507Q8TCN5 953 aa14.32□□□□□ -0.12
SNX1-211ENST00000560829 PIGOQ8TEQ8 1089 aa14.32□□□□□ -0.12
SNX1-211ENST00000560829 SCFD1Q8WVM8 642 aa14.32□□□□□ -0.12
SNX1-211ENST00000560829 CDHR1Q96JP9 859 aa14.32□□□□□ -0.12
SNX1-211ENST00000560829 TSG101Q99816 390 aa14.32□□□□□ -0.12
SNX1-211ENST00000560829 SENP7Q9BQF6 1050 aa14.32□□□□□ -0.12
SNX1-211ENST00000560829 FGFBP2Q9BYJ0 223 aa14.32□□□□□ -0.12
SNX1-211ENST00000560829 SPATC1LQ9H0A9 340 aa14.32□□□□□ -0.12
SNX1-211ENST00000560829 VPS16Q9H269 839 aa14.32□□□□□ -0.12
SNX1-211ENST00000560829 OLFML3Q9NRN5 406 aa14.32□□□□□ -0.12
SNX1-211ENST00000560829 COL4A3BPQ9Y5P4 624 aa14.32□□□□□ -0.12
SNX1-211ENST00000560829 PTPRFP10586 1907 aa14.32□□□□□ -0.12
SNX1-211ENST00000560829 A0A1W2PQC6 194 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 LGALS16A8MUM7 142 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 DDX39AO00148 427 aaKnown RBP14.31□□□□□ -0.12
SNX1-211ENST00000560829 CNMDO75829 334 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 RGS20O76081 388 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 PTPN21Q16825 1174 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 LRRC55Q6ZSA7 311 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 TC2NQ8N9U0 490 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 CNOT6LQ96LI5 555 aaKnown RBP14.31□□□□□ -0.12
SNX1-211ENST00000560829 PKD2L1Q9P0L9 805 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.31□□□□□ -0.12
SNX1-211ENST00000560829 COL11A1P12107 1806 aaPredicted RBP14.31□□□□□ -0.12
SNX1-211ENST00000560829 WDR64B1ANS9 1081 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 TBCAO75347 108 aaKnown RBP14.31□□□□□ -0.12
SNX1-211ENST00000560829 GUCY2CP25092 1073 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 COPB2P35606 906 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 QARSP47897 775 aaKnown RBP14.31□□□□□ -0.12
SNX1-211ENST00000560829 ZNF131P52739 623 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 RAD51AP2Q09MP3 1159 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 BMT2Q1RMZ1 405 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 GPAT2Q6NUI2 795 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 ZNF746Q6NUN9 644 aaPredicted RBP14.31□□□□□ -0.12
SNX1-211ENST00000560829 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.31□□□□□ -0.12
SNX1-211ENST00000560829 ZC3H3Q8IXZ2 948 aaKnown RBP14.31□□□□□ -0.12
SNX1-211ENST00000560829 BANK1Q8NDB2 785 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 TUBGCP2Q9BSJ2 902 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 KCTD10Q9H3F6 313 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 SEL1LQ9UBV2 794 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 DBR1Q9UK59 544 aaKnown RBP14.31□□□□□ -0.12
SNX1-211ENST00000560829 ODF2LQ9ULJ1 636 aa14.31□□□□□ -0.12
SNX1-211ENST00000560829 NFASCO94856 1347 aa14.3□□□□□ -0.12
SNX1-211ENST00000560829 ZBTB39O15060 712 aa14.3□□□□□ -0.12
SNX1-211ENST00000560829 SLC25A27O95847 323 aa14.3□□□□□ -0.12
SNX1-211ENST00000560829 CCNE2O96020 404 aa14.3□□□□□ -0.12
SNX1-211ENST00000560829 POTEJP0CG39 1038 aa14.3□□□□□ -0.12
SNX1-211ENST00000560829 KCNA2P16389 499 aa14.3□□□□□ -0.12
SNX1-211ENST00000560829 GJA5P36382 358 aa14.3□□□□□ -0.12
SNX1-211ENST00000560829 FKBP1BP68106 108 aa14.3□□□□□ -0.12
SNX1-211ENST00000560829 FKBP3Q00688 224 aaKnown RBP14.3□□□□□ -0.12
SNX1-211ENST00000560829 TRIM14Q14142 442 aa14.3□□□□□ -0.12
SNX1-211ENST00000560829 GNPTABQ3T906 1256 aa14.3□□□□□ -0.12
SNX1-211ENST00000560829 PPP4R3CPQ6ZMV5 832 aa14.3□□□□□ -0.12
SNX1-211ENST00000560829 SFR1Q86XK3 245 aa14.3□□□□□ -0.12
SNX1-211ENST00000560829 TMEM139Q8IV31 216 aa14.3□□□□□ -0.12
SNX1-211ENST00000560829 C4orf19Q8IY42 314 aa14.3□□□□□ -0.12
SNX1-211ENST00000560829 ANKRD35Q8N283 1001 aa14.3□□□□□ -0.12
SNX1-211ENST00000560829 CEP63Q96MT8 703 aa14.3□□□□□ -0.12
SNX1-211ENST00000560829 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.3□□□□□ -0.125e-7■■□□□ 13.4
SNX1-211ENST00000560829 SPATA31C2B4DYI2 1134 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 OSBPP22059 807 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 EDNRBP24530 442 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 ICAM3P32942 547 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 DNM2P50570 870 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 SNAPC2Q13487 334 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 EDRF1Q3B7T1 1238 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 MOV10L1Q9BXT6 1211 aaKnown RBP14.29□□□□□ -0.12
SNX1-211ENST00000560829 ZHX3Q9H4I2 956 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 TBC1D7Q9P0N9 293 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 TCEAL9Q9UHQ7 104 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 CLEC11AQ9Y240 323 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 ASTN1O14525 1302 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 RSPH10B2B2RC85 870 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 AKR1B15C9JRZ8 316 aaPredicted RBP14.29□□□□□ -0.12
SNX1-211ENST00000560829 EIF3JO75822 258 aaKnown RBP14.29□□□□□ -0.12
SNX1-211ENST00000560829 TPM2P07951 284 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 RSPH10BP0C881 870 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 CASP5P51878 434 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 PSMC5P62195 406 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 UBXN1Q04323 297 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 STXBP2Q15833 593 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 MIIPQ5JXC2 388 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 MAP1SQ66K74 1059 aaPredicted RBP14.29□□□□□ -0.12
SNX1-211ENST00000560829 PPFIBP1Q86W92 1011 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 SMAP1Q8IYB5 467 aaPredicted RBP14.29□□□□□ -0.12
SNX1-211ENST00000560829 SLC10A4Q96EP9 437 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 PANX2Q96RD6 677 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 PARVGQ9HBI0 331 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 RBPJLQ9UBG7 517 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 TRAF3IP3Q9Y228 551 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 SAMM50Q9Y512 469 aa14.29□□□□□ -0.12
SNX1-211ENST00000560829 ARHGEF35A5YM69 484 aa14.28□□□□□ -0.12
SNX1-211ENST00000560829 STX10O60499 249 aa14.28□□□□□ -0.12
SNX1-211ENST00000560829 PEX10O60683 326 aa14.28□□□□□ -0.12
SNX1-211ENST00000560829 GYPCP04921 128 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms