RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 AIFM3Q96NN9 605 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 MTCH2Q9Y6C9 303 aa12.79□□□□□ -0.36
GABPB1-210ENST00000560825 RALGAPA2Q2PPJ7 1873 aa12.78□□□□□ -0.36
GABPB1-210ENST00000560825 MEIS1O00470 390 aa12.78□□□□□ -0.36
GABPB1-210ENST00000560825 TLL1O43897 1013 aa12.78□□□□□ -0.36
GABPB1-210ENST00000560825 GJB5O95377 273 aa12.78□□□□□ -0.36
GABPB1-210ENST00000560825 SREBF1P36956 1147 aa12.78□□□□□ -0.36
GABPB1-210ENST00000560825 IGBP1P78318 339 aa12.78□□□□□ -0.36
GABPB1-210ENST00000560825 TFF2Q03403 129 aa12.78□□□□□ -0.36
GABPB1-210ENST00000560825 MGAT3Q09327 533 aa12.78□□□□□ -0.36
GABPB1-210ENST00000560825 GRIK4Q16099 956 aa12.78□□□□□ -0.36
GABPB1-210ENST00000560825 PHOSPHO2Q8TCD6 241 aa12.78□□□□□ -0.36
GABPB1-210ENST00000560825 GDPD5Q8WTR4 605 aa12.78□□□□□ -0.36
GABPB1-210ENST00000560825 SEPT1Q8WYJ6 367 aa12.78□□□□□ -0.36
GABPB1-210ENST00000560825 GAS2L1Q99501 681 aaPredicted RBP12.78□□□□□ -0.36
GABPB1-210ENST00000560825 JPH1Q9HDC5 661 aaPredicted RBP12.78□□□□□ -0.36
GABPB1-210ENST00000560825 VPS54Q9P1Q0 977 aa12.78□□□□□ -0.36
GABPB1-210ENST00000560825 EMSYQ7Z589 1322 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 LINC01553A4QN01 128 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 PRPF3O43395 683 aaKnown RBP12.77□□□□□ -0.37
GABPB1-210ENST00000560825 INSRRP14616 1297 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 ATP4AP20648 1035 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 KCNJ6P48051 423 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 EVCP57679 992 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 ACTR2P61160 394 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 FGD1P98174 961 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 TMEM62Q0P6H9 643 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 GRB10Q13322 594 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 PLCB4Q15147 1175 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 CEP55Q53EZ4 464 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 PPP1R18Q6NYC8 613 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 RUFY3Q7L099 469 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 FBXL16Q8N461 479 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 DNAJB3Q8WWF6 145 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 LENG9Q96B70 501 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 C17orf80Q9BSJ5 609 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 ZMYND12Q9H0C1 365 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 ZSWIM6Q9HCJ5 1215 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 SLC9A2Q9UBY0 812 aa12.77□□□□□ -0.37
GABPB1-210ENST00000560825 MBLAC1A4D2B0 266 aaPredicted RBP12.76□□□□□ -0.37
GABPB1-210ENST00000560825 ZBTB42B2RXF5 422 aa12.76□□□□□ -0.37
GABPB1-210ENST00000560825 GABBR2O75899 941 aa12.76□□□□□ -0.37
GABPB1-210ENST00000560825 HMGB1P09429 215 aaKnown RBP12.76□□□□□ -0.37
GABPB1-210ENST00000560825 GHRP10912 638 aa12.76□□□□□ -0.37
GABPB1-210ENST00000560825 PPFIA1Q13136 1202 aa12.76□□□□□ -0.37
GABPB1-210ENST00000560825 STK3Q13188 491 aa12.76□□□□□ -0.37
GABPB1-210ENST00000560825 IKBKEQ14164 716 aa12.76□□□□□ -0.37
GABPB1-210ENST00000560825 LPIN1Q14693 890 aa12.76□□□□□ -0.37
GABPB1-210ENST00000560825 NPY5RQ15761 445 aa12.76□□□□□ -0.37
GABPB1-210ENST00000560825 FAM26DQ5JW98 314 aa12.76□□□□□ -0.37
GABPB1-210ENST00000560825 CCDC60Q8IWA6 550 aaPredicted RBP12.76□□□□□ -0.37
GABPB1-210ENST00000560825 LINC01599Q8WXQ3 324 aa12.76□□□□□ -0.37
GABPB1-210ENST00000560825 GLG1Q92896 1179 aa12.76□□□□□ -0.37
GABPB1-210ENST00000560825 SLC26A6Q9BXS9 759 aa12.76□□□□□ -0.37
GABPB1-210ENST00000560825 AGO3Q9H9G7 860 aaKnown RBP12.76□□□□□ -0.37
GABPB1-210ENST00000560825 GJB4Q9NTQ9 266 aa12.76□□□□□ -0.37
GABPB1-210ENST00000560825 PLXNA4Q9HCM2 1894 aa12.76□□□□□ -0.37
GABPB1-210ENST00000560825 FNDC1Q4ZHG4 1894 aaPredicted RBP12.75□□□□□ -0.37
GABPB1-210ENST00000560825 NFASCO94856 1347 aa12.75□□□□□ -0.37
GABPB1-210ENST00000560825 NRCAMQ92823 1304 aa12.75□□□□□ -0.37
GABPB1-210ENST00000560825 IGKV6D-21A0A0A0MT36 114 aa12.75□□□□□ -0.37
GABPB1-210ENST00000560825 ABHD14A-ACY1A0A1B0GW23 586 aa12.75□□□□□ -0.37
GABPB1-210ENST00000560825 UPP2O95045 317 aa12.75□□□□□ -0.37
GABPB1-210ENST00000560825 ATG7O95352 703 aa12.75□□□□□ -0.37
GABPB1-210ENST00000560825 RCAN1P53805 252 aa12.75□□□□□ -0.37
GABPB1-210ENST00000560825 ABHD15Q6UXT9 468 aa12.75□□□□□ -0.37
GABPB1-210ENST00000560825 MYOCDQ8IZQ8 938 aa12.75□□□□□ -0.37
GABPB1-210ENST00000560825 NECAB3Q96P71 396 aaPredicted RBP12.75□□□□□ -0.37
GABPB1-210ENST00000560825 FAM49AQ9H0Q0 323 aaPredicted RBP12.75□□□□□ -0.37
GABPB1-210ENST00000560825 SUGCTQ9HAC7 445 aa12.75□□□□□ -0.37
GABPB1-210ENST00000560825 CDHR5Q9HBB8 845 aa12.75□□□□□ -0.37
GABPB1-210ENST00000560825 ERAP1Q9NZ08 941 aa12.75□□□□□ -0.37
GABPB1-210ENST00000560825 TUBE1Q9UJT0 475 aa12.75□□□□□ -0.37
GABPB1-210ENST00000560825 ZNF215Q9UL58 517 aaPredicted RBP12.75□□□□□ -0.37
GABPB1-210ENST00000560825 TTC28Q96AY4 2481 aa12.74□□□□□ -0.37
GABPB1-210ENST00000560825 TTC3P53804 2025 aa12.74□□□□□ -0.37
GABPB1-210ENST00000560825 REC8O95072 547 aa12.74□□□□□ -0.37
GABPB1-210ENST00000560825 SEC24BO95487 1268 aa12.74□□□□□ -0.37
GABPB1-210ENST00000560825 LINC00271P0C7V0 271 aa12.74□□□□□ -0.37
GABPB1-210ENST00000560825 KCNQ1P51787 676 aa12.74□□□□□ -0.37
GABPB1-210ENST00000560825 TRMT1LQ7Z2T5 733 aaKnown RBP12.74□□□□□ -0.37
GABPB1-210ENST00000560825 RTN4RL1Q86UN2 441 aaPredicted RBP12.74□□□□□ -0.37
GABPB1-210ENST00000560825 PLA2G4DQ86XP0 818 aa12.74□□□□□ -0.37
GABPB1-210ENST00000560825 GIMAP8Q8ND71 665 aaPredicted RBP12.74□□□□□ -0.37
GABPB1-210ENST00000560825 CDHR1Q96JP9 859 aa12.74□□□□□ -0.37
GABPB1-210ENST00000560825 ZBED2Q9BTP6 218 aa12.74□□□□□ -0.37
GABPB1-210ENST00000560825 SMARCAD1Q9H4L7 1026 aa12.74□□□□□ -0.37
GABPB1-210ENST00000560825 EHMT1Q9H9B1 1298 aa12.74□□□□□ -0.37
GABPB1-210ENST00000560825 CDY2AQ9Y6F7 541 aa12.74□□□□□ -0.37
GABPB1-210ENST00000560825 TRIOO75962 3097 aa12.74□□□□□ -0.37
GABPB1-210ENST00000560825 ESYT2A0FGR8 921 aa12.73□□□□□ -0.37
GABPB1-210ENST00000560825 hCG_1984214I3L0E3 225 aa12.73□□□□□ -0.37
GABPB1-210ENST00000560825 LARGE1O95461 756 aa12.73□□□□□ -0.37
GABPB1-210ENST00000560825 FOSP01100 380 aaPredicted RBP12.73□□□□□ -0.37
GABPB1-210ENST00000560825 CYP3A4P08684 503 aa12.73□□□□□ -0.37
GABPB1-210ENST00000560825 IFNAR1P17181 557 aa12.73□□□□□ -0.37
GABPB1-210ENST00000560825 HTRA4P83105 476 aaPredicted RBP12.73□□□□□ -0.37
GABPB1-210ENST00000560825 AP3B2Q13367 1082 aa12.73□□□□□ -0.37
GABPB1-210ENST00000560825 FBXO47Q5MNV8 452 aa12.73□□□□□ -0.37
GABPB1-210ENST00000560825 REXO1Q8N1G1 1221 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 994.3 ms