RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 CHD1LQ86WJ1 897 aa12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 RNF135Q8IUD6 432 aa12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 GLG1Q92896 1179 aa12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 MTMR8Q96EF0 704 aa12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 KCNH6Q9H252 994 aa12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 RWDD1Q9H446 243 aaPredicted RBP12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 PKD2L1Q9P0L9 805 aa12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 PIEZO1Q92508 2521 aa12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 NRCAMQ92823 1304 aa12.09□□□□□ -0.47
CDC42BPB-207ENST00000560492 SPATA31C2B4DYI2 1134 aa12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 M0QZ92 97 aa12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 LINC01565O15544 149 aa12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 TBX10O75333 385 aa12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 CHRNA1P02708 482 aa12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 TCF7P36402 384 aaPredicted RBP12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 LTBRP36941 435 aa12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 SEC23AQ15436 765 aa12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 SMAD2Q15796 467 aaKnown RBP12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 FAM26DQ5JW98 314 aa12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 SPOUT1Q5T280 376 aaKnown RBP12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 TAF2Q6P1X5 1199 aa12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 CATIPQ7Z7H3 387 aa12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 PLEKHM2Q8IWE5 1019 aa12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 SUGP1Q8IWZ8 645 aaKnown RBP12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 DNAJB3Q8WWF6 145 aa12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 INPP4AQ96PE3 977 aaPredicted RBP12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 FAM49AQ9H0Q0 323 aaPredicted RBP12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 SEC63Q9UGP8 760 aaKnown RBP12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 TUBE1Q9UJT0 475 aa12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 LRFN2Q9ULH4 789 aa12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 CDY2AQ9Y6F7 541 aa12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 PLXNA4Q9HCM2 1894 aa12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 TTC3P53804 2025 aa12.08□□□□□ -0.48
CDC42BPB-207ENST00000560492 C5orf67F2Z3F1 127 aa12.07□□□□□ -0.48
CDC42BPB-207ENST00000560492 PPFIA3O75145 1194 aa12.07□□□□□ -0.48
CDC42BPB-207ENST00000560492 MMP1P03956 469 aa12.07□□□□□ -0.48
CDC42BPB-207ENST00000560492 ICAM3P32942 547 aa12.07□□□□□ -0.48
CDC42BPB-207ENST00000560492 SEMA3FQ13275 785 aa12.07□□□□□ -0.48
CDC42BPB-207ENST00000560492 LPIN1Q14693 890 aa12.07□□□□□ -0.48
CDC42BPB-207ENST00000560492 GRIK4Q16099 956 aa12.07□□□□□ -0.48
CDC42BPB-207ENST00000560492 USP17L6PQ6QN14 398 aa12.07□□□□□ -0.48
CDC42BPB-207ENST00000560492 RBM23Q86U06 439 aaKnown RBP12.07□□□□□ -0.48
CDC42BPB-207ENST00000560492 GIMAP8Q8ND71 665 aaPredicted RBP12.07□□□□□ -0.48
CDC42BPB-207ENST00000560492 RRP36Q96EU6 259 aaKnown RBP12.07□□□□□ -0.48
CDC42BPB-207ENST00000560492 RIOX1Q9H6W3 641 aa12.07□□□□□ -0.48
CDC42BPB-207ENST00000560492 CIZ1Q9ULV3 898 aaPredicted RBP12.07□□□□□ -0.48
CDC42BPB-207ENST00000560492 TELO2Q9Y4R8 837 aa12.07□□□□□ -0.48
CDC42BPB-207ENST00000560492 ENPP3O14638 875 aa12.06□□□□□ -0.48
CDC42BPB-207ENST00000560492 CD52P31358 61 aa12.06□□□□□ -0.48
CDC42BPB-207ENST00000560492 TMEM62Q0P6H9 643 aa12.06□□□□□ -0.48
CDC42BPB-207ENST00000560492 COL19A1Q14993 1142 aa12.06□□□□□ -0.48
CDC42BPB-207ENST00000560492 CTC1Q2NKJ3 1217 aa12.06□□□□□ -0.48
CDC42BPB-207ENST00000560492 HERC4Q5GLZ8 1057 aaPredicted RBP12.06□□□□□ -0.48
CDC42BPB-207ENST00000560492 PCNX4Q63HM2 1172 aa12.06□□□□□ -0.48
CDC42BPB-207ENST00000560492 TSHZ1Q6ZSZ6 1077 aa12.06□□□□□ -0.48
CDC42BPB-207ENST00000560492 CTCFLQ8NI51 663 aaPredicted RBP12.06□□□□□ -0.48
CDC42BPB-207ENST00000560492 MICAL1Q8TDZ2 1067 aa12.06□□□□□ -0.48
CDC42BPB-207ENST00000560492 PBXIP1Q96AQ6 731 aa12.06□□□□□ -0.48
CDC42BPB-207ENST00000560492 PLVAPQ9BX97 442 aa12.06□□□□□ -0.48
CDC42BPB-207ENST00000560492 ERAP1Q9NZ08 941 aa12.06□□□□□ -0.48
CDC42BPB-207ENST00000560492 MRPL42Q9Y6G3 142 aaKnown RBP12.06□□□□□ -0.48
CDC42BPB-207ENST00000560492 TRIOO75962 3097 aa12.06□□□□□ -0.48
CDC42BPB-207ENST00000560492 ZNF318Q5VUA4 2279 aa12.06□□□□□ -0.48
CDC42BPB-207ENST00000560492 CYTH3O43739 400 aa12.05□□□□□ -0.48
CDC42BPB-207ENST00000560492 STAG3L1P0CL83 205 aa12.05□□□□□ -0.48
CDC42BPB-207ENST00000560492 NRIP1P48552 1158 aa12.05□□□□□ -0.48
CDC42BPB-207ENST00000560492 MRPS6P82932 125 aaKnown RBP12.05□□□□□ -0.48
CDC42BPB-207ENST00000560492 PAK2Q13177 524 aa12.05□□□□□ -0.48
CDC42BPB-207ENST00000560492 SLC35G1Q2M3R5 365 aa12.05□□□□□ -0.48
CDC42BPB-207ENST00000560492 FBXO47Q5MNV8 452 aa12.05□□□□□ -0.48
CDC42BPB-207ENST00000560492 IER5Q5VY09 327 aa12.05□□□□□ -0.48
CDC42BPB-207ENST00000560492 NCOA7Q8NI08 942 aa12.05□□□□□ -0.48
CDC42BPB-207ENST00000560492 SEPT1Q8WYJ6 367 aa12.05□□□□□ -0.48
CDC42BPB-207ENST00000560492 EDAQ92838 391 aa12.05□□□□□ -0.48
CDC42BPB-207ENST00000560492 CLP1Q92989 425 aaKnown RBP12.05□□□□□ -0.48
CDC42BPB-207ENST00000560492 CDHR1Q96JP9 859 aa12.05□□□□□ -0.48
CDC42BPB-207ENST00000560492 SENP7Q9BQF6 1050 aa12.05□□□□□ -0.48
CDC42BPB-207ENST00000560492 SMARCAD1Q9H4L7 1026 aa12.05□□□□□ -0.48
CDC42BPB-207ENST00000560492 EHMT1Q9H9B1 1298 aa12.05□□□□□ -0.48
CDC42BPB-207ENST00000560492 SENP2Q9HC62 589 aa12.05□□□□□ -0.48
CDC42BPB-207ENST00000560492 PLAGL2Q9UPG8 496 aa12.05□□□□□ -0.48
CDC42BPB-207ENST00000560492 FRMPD4Q14CM0 1322 aa12.05□□□□□ -0.48
CDC42BPB-207ENST00000560492 TMEM221A6NGB7 291 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 M0R296 226 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 DGKIO75912 1065 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 ITGB1P05556 798 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 PTPN5P54829 565 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 ADAM17P78536 824 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 NUCB1Q02818 461 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 MGAT3Q09327 533 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 ADAM15Q13444 863 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 MTMR1Q13613 665 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 XRRA1Q6P2D8 792 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 NFXL1Q6ZNB6 911 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 ADGRD2Q7Z7M1 963 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 ZBTB33Q86T24 672 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 NPAS4Q8IUM7 802 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 SMC5Q8IY18 1101 aa12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 CMTR2Q8IYT2 770 aaKnown RBP12.04□□□□□ -0.48
CDC42BPB-207ENST00000560492 KLHL23Q8NBE8 558 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms