RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 P4HBP07237 508 aaKnown RBP13.78□□□□□ -0.2
USP8-209ENST00000560297 IL17AQ16552 155 aa13.78□□□□□ -0.2
USP8-209ENST00000560297 UTP14CQ5TAP6 766 aaKnown RBP13.78□□□□□ -0.2
USP8-209ENST00000560297 CXCL17Q6UXB2 119 aa13.78□□□□□ -0.2
USP8-209ENST00000560297 NEK9Q8TD19 979 aa13.78□□□□□ -0.2
USP8-209ENST00000560297 AFAP1L1Q8TED9 768 aa13.78□□□□□ -0.2
USP8-209ENST00000560297 ATP6V0A1Q93050 837 aa13.78□□□□□ -0.2
USP8-209ENST00000560297 VTI1AQ96AJ9 217 aa13.78□□□□□ -0.2
USP8-209ENST00000560297 SPATA32Q96LK8 384 aa13.78□□□□□ -0.2
USP8-209ENST00000560297 GLT1D1Q96MS3 346 aa13.78□□□□□ -0.2
USP8-209ENST00000560297 EIF2AK1Q9BQI3 630 aaKnown RBP13.78□□□□□ -0.2
USP8-209ENST00000560297 C16orf70Q9BSU1 422 aa13.78□□□□□ -0.2
USP8-209ENST00000560297 SEZ6LQ9BYH1 1024 aa13.78□□□□□ -0.2
USP8-209ENST00000560297 TUT1Q9H6E5 874 aaKnown RBP13.78□□□□□ -0.2
USP8-209ENST00000560297 ZNF302Q9NR11 478 aa13.78□□□□□ -0.2
USP8-209ENST00000560297 ERAP1Q9NZ08 941 aa13.78□□□□□ -0.2
USP8-209ENST00000560297 TELO2Q9Y4R8 837 aa13.78□□□□□ -0.2
USP8-209ENST00000560297 MAFBQ9Y5Q3 323 aaPredicted RBP13.78□□□□□ -0.2
USP8-209ENST00000560297 EMSYQ7Z589 1322 aa13.78□□□□□ -0.2
USP8-209ENST00000560297 POTEMA6NI47 508 aa13.77□□□□□ -0.21
USP8-209ENST00000560297 CCDC85CA6NKD9 419 aa13.77□□□□□ -0.21
USP8-209ENST00000560297 SLC26A4O43511 780 aa13.77□□□□□ -0.21
USP8-209ENST00000560297 F2P00734 622 aa13.77□□□□□ -0.21
USP8-209ENST00000560297 EN2P19622 333 aaPredicted RBP13.77□□□□□ -0.21
USP8-209ENST00000560297 MUTP22033 750 aa13.77□□□□□ -0.21
USP8-209ENST00000560297 QARSP47897 775 aaKnown RBP13.77□□□□□ -0.21
USP8-209ENST00000560297 PSMC5P62195 406 aa13.77□□□□□ -0.21
USP8-209ENST00000560297 KRT79Q5XKE5 535 aa13.77□□□□□ -0.21
USP8-209ENST00000560297 HAUS3Q68CZ6 603 aa13.77□□□□□ -0.21
USP8-209ENST00000560297 PDXDC2PQ6P474 469 aa13.77□□□□□ -0.21
USP8-209ENST00000560297 ZNF579Q8NAF0 562 aaKnown RBP13.77□□□□□ -0.21
USP8-209ENST00000560297 LEO1Q8WVC0 666 aaPredicted RBP13.77□□□□□ -0.21
USP8-209ENST00000560297 PCYT2Q99447 389 aa13.77□□□□□ -0.21
USP8-209ENST00000560297 HSD17B14Q9BPX1 270 aa13.77□□□□□ -0.21
USP8-209ENST00000560297 POLR3CQ9BUI4 534 aaPredicted RBP13.77□□□□□ -0.21
USP8-209ENST00000560297 TUFT1Q9NNX1 390 aa13.77□□□□□ -0.21
USP8-209ENST00000560297 GABBR1Q9UBS5 961 aa13.77□□□□□ -0.21
USP8-209ENST00000560297 FBXO2Q9UK22 296 aaPredicted RBP13.77□□□□□ -0.21
USP8-209ENST00000560297 CENPFP49454 3210 aa13.76□□□□□ -0.21
USP8-209ENST00000560297 HAS3O00219 553 aa13.76□□□□□ -0.21
USP8-209ENST00000560297 CUTAO60888 179 aa13.76□□□□□ -0.21
USP8-209ENST00000560297 SLITRK3O94933 977 aa13.76□□□□□ -0.21
USP8-209ENST00000560297 RPA1P27694 616 aa13.76□□□□□ -0.21
USP8-209ENST00000560297 ME1P48163 572 aa13.76□□□□□ -0.21
USP8-209ENST00000560297 MNX1P50219 401 aaPredicted RBP13.76□□□□□ -0.21
USP8-209ENST00000560297 CSPP1Q1MSJ5 1256 aa13.76□□□□□ -0.21
USP8-209ENST00000560297 NECAB2Q7Z6G3 386 aa13.76□□□□□ -0.21
USP8-209ENST00000560297 CCDC60Q8IWA6 550 aaPredicted RBP13.76□□□□□ -0.21
USP8-209ENST00000560297 TPH2Q8IWU9 490 aa13.76□□□□□ -0.21
USP8-209ENST00000560297 KCTD17Q8N5Z5 321 aa13.76□□□□□ -0.21
USP8-209ENST00000560297 KAT2BQ92831 832 aa13.76□□□□□ -0.21
USP8-209ENST00000560297 ZSWIM4Q9H7M6 989 aa13.76□□□□□ -0.21
USP8-209ENST00000560297 NRBP2Q9NSY0 501 aa13.76□□□□□ -0.21
USP8-209ENST00000560297 A0A1W2PQ45 241 aaPredicted RBP13.75□□□□□ -0.21
USP8-209ENST00000560297 A0A1W2PQY0 241 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 LYPLA2O95372 231 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 ZNF286BP0CG31 522 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 COL6A1P12109 1028 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 XRCC6P12956 609 aaKnown RBP eCLIP13.75□□□□□ -0.21
USP8-209ENST00000560297 UBA7P41226 1012 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 PSEN2P49810 448 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 ITGA7Q13683 1181 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 MFSD10Q14728 455 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 KIAA0753Q2KHM9 967 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 CLEC17AQ6ZS10 378 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 CATSPER3Q86XQ3 398 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 C4orf19Q8IY42 314 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 CKAP2LQ8IYA6 745 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 DYDC2Q96IM9 177 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 PAWRQ96IZ0 340 aaKnown RBP13.75□□□□□ -0.21
USP8-209ENST00000560297 FAM167AQ96KS9 214 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 SENP6Q9GZR1 1112 aaPredicted RBP13.75□□□□□ -0.21
USP8-209ENST00000560297 CSRNP2Q9H175 543 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 C11orf49Q9H6J7 331 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 STARD7Q9NQZ5 370 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 RGL1Q9NZL6 768 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 PCDHA7Q9UN72 937 aa13.75□□□□□ -0.21
USP8-209ENST00000560297 KIAA0100Q14667 2235 aaKnown RBP13.74□□□□□ -0.21
USP8-209ENST00000560297 IGSF9BQ9UPX0 1349 aa13.74□□□□□ -0.21
USP8-209ENST00000560297 A0A0U1RQG5 324 aaPredicted RBP13.74□□□□□ -0.21
USP8-209ENST00000560297 POTEB3A0JP26 581 aa13.74□□□□□ -0.21
USP8-209ENST00000560297 HBP1O60381 514 aa13.74□□□□□ -0.21
USP8-209ENST00000560297 SPATA31C1P0DKV0 1188 aa13.74□□□□□ -0.21
USP8-209ENST00000560297 GNAT1P11488 350 aa13.74□□□□□ -0.21
USP8-209ENST00000560297 TXLNAP40222 546 aa13.74□□□□□ -0.21
USP8-209ENST00000560297 CCT6AP40227 531 aaKnown RBP13.74□□□□□ -0.21
USP8-209ENST00000560297 PTPN11Q06124 597 aaPredicted RBP13.74□□□□□ -0.21
USP8-209ENST00000560297 NBPF20Q3BBV1 942 aa13.74□□□□□ -0.21
USP8-209ENST00000560297 XKR3Q5GH77 459 aa13.74□□□□□ -0.21
USP8-209ENST00000560297 ADALQ6DHV7 355 aa13.74□□□□□ -0.21
USP8-209ENST00000560297 NFRKBQ6P4R8 1299 aa13.74□□□□□ -0.21
USP8-209ENST00000560297 POTEBQ6S5H4 581 aa13.74□□□□□ -0.21
USP8-209ENST00000560297 OTUD6AQ7L8S5 288 aa13.74□□□□□ -0.21
USP8-209ENST00000560297 TRIM50Q86XT4 487 aa13.74□□□□□ -0.21
USP8-209ENST00000560297 C7orf31Q8N865 590 aa13.74□□□□□ -0.21
USP8-209ENST00000560297 BANK1Q8NDB2 785 aa13.74□□□□□ -0.21
USP8-209ENST00000560297 SNX29Q8TEQ0 813 aa13.74□□□□□ -0.21
USP8-209ENST00000560297 ATP8B4Q8TF62 1192 aa13.74□□□□□ -0.21
USP8-209ENST00000560297 BBXQ8WY36 941 aaPredicted RBP13.74□□□□□ -0.21
USP8-209ENST00000560297 CHAMP1Q96JM3 812 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms