RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 FBXO11Q86XK2 927 aa6□□□□□ -1.45
TPM1-222ENST00000560131 PHF6Q8IWS0 365 aaKnown RBP eCLIP6□□□□□ -1.45
TPM1-222ENST00000560131 C16orf71Q8IYS4 520 aaPredicted RBP6□□□□□ -1.45
TPM1-222ENST00000560131 GOLGA5Q8TBA6 731 aa6□□□□□ -1.45
TPM1-222ENST00000560131 OTUD7AQ8TE49 926 aaPredicted RBP6□□□□□ -1.45
TPM1-222ENST00000560131 MORC4Q8TE76 937 aa6□□□□□ -1.45
TPM1-222ENST00000560131 XAGE3Q8WTP9 111 aa6□□□□□ -1.45
TPM1-222ENST00000560131 BTN2A2Q8WVV5 523 aa6□□□□□ -1.45
TPM1-222ENST00000560131 SCLYQ96I15 445 aa6□□□□□ -1.45
TPM1-222ENST00000560131 CHAMP1Q96JM3 812 aa6□□□□□ -1.45
TPM1-222ENST00000560131 MAGEB10Q96LZ2 347 aaPredicted RBP6□□□□□ -1.45
TPM1-222ENST00000560131 KREMEN1Q96MU8 473 aa6□□□□□ -1.45
TPM1-222ENST00000560131 RNF208Q9H0X6 261 aa6□□□□□ -1.45
TPM1-222ENST00000560131 ATG3Q9NT62 314 aa6□□□□□ -1.45
TPM1-222ENST00000560131 CLIP2Q9UDT6 1046 aa6□□□□□ -1.45
TPM1-222ENST00000560131 PCOLCE2Q9UKZ9 415 aa6□□□□□ -1.45
TPM1-222ENST00000560131 PALD1Q9ULE6 856 aa6□□□□□ -1.45
TPM1-222ENST00000560131 SMC3Q9UQE7 1217 aa6□□□□□ -1.45
TPM1-222ENST00000560131 PTPRMP28827 1452 aa6□□□□□ -1.45
TPM1-222ENST00000560131 ERCC6L2Q5T890 1561 aa6□□□□□ -1.45
TPM1-222ENST00000560131 PHLPP2Q6ZVD8 1323 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 USP42Q9H9J4 1324 aaKnown RBP5.99□□□□□ -1.45
TPM1-222ENST00000560131 MYH15Q9Y2K3 1946 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 KIDINS220Q9ULH0 1771 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 MSH6P52701 1360 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 B4E1Z4 1266 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 DLL1O00548 723 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 CLGNO14967 610 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 SGSM2O43147 1006 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 KCNH1O95259 989 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 PRKAR2BP31323 418 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 ASPAP45381 313 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 NEK2P51955 445 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 TUBB4BP68371 445 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 ITKQ08881 620 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 MTMR1Q13613 665 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 STAT4Q14765 748 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 IQCB1Q15051 598 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 CFAP100Q494V2 611 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 NOL9Q5SY16 702 aaKnown RBP5.99□□□□□ -1.45
TPM1-222ENST00000560131 TRAPPC3LQ5T215 181 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 JAKMIP3Q5VZ66 844 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 ICE2Q659A1 982 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 GTF2IRD2BQ6EKJ0 949 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 CCSAPQ6IQ19 270 aaPredicted RBP5.99□□□□□ -1.45
TPM1-222ENST00000560131 GTF2IRD2Q86UP8 949 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 EXOC8Q8IYI6 725 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 SMYD4Q8IYR2 804 aaPredicted RBP5.99□□□□□ -1.45
TPM1-222ENST00000560131 TSPYL6Q8N831 410 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 C12orf50Q8NA57 414 aaPredicted RBP5.99□□□□□ -1.45
TPM1-222ENST00000560131 SPC24Q8NBT2 197 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 CCDC150Q8NCX0 1101 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 ADCY4Q8NFM4 1077 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 FBXO18Q8NFZ0 1043 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 DNAJB8Q8NHS0 232 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 SYTL5Q8TDW5 730 aaPredicted RBP5.99□□□□□ -1.45
TPM1-222ENST00000560131 PMM1Q92871 262 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 LENG1Q96BZ8 264 aaPredicted RBP5.99□□□□□ -1.45
TPM1-222ENST00000560131 FBXL18Q96ME1 805 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 NCAPGQ9BPX3 1015 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 TRIM5Q9C035 493 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 PUS7LQ9H0K6 701 aaKnown RBP5.99□□□□□ -1.45
TPM1-222ENST00000560131 TNMDQ9H2S6 317 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 CGGBP1Q9UFW8 167 aaPredicted RBP5.99□□□□□ -1.45
TPM1-222ENST00000560131 FBXL21Q9UKT6 434 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 PCDHB12Q9Y5F1 795 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 XRN1Q8IZH2 1706 aaKnown RBP5.99□□□□□ -1.45
TPM1-222ENST00000560131 TTC41PQ6P2S7 1318 aa5.99□□□□□ -1.45
TPM1-222ENST00000560131 PLEKHG2Q9H7P9 1386 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 TCRBV16S1A1N1A0A5B0 115 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 SHTN1A0MZ66 631 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 EFCAB8A8MWE9 144 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 MYO1CO00159 1063 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 CHL1O00533 1208 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 FIBPO43427 364 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 NRDCO43847 1150 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 DHX16O60231 1041 aaKnown RBP5.98□□□□□ -1.45
TPM1-222ENST00000560131 ZEB2O60315 1214 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 CPP00450 1065 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 JMJD7P0C870 316 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 DRD2P14416 443 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 RAB27AP51159 221 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 GFRA1P56159 465 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 LRMPQ12912 555 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 ZNF460Q14592 562 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 SF1Q15637 639 aaKnown RBP5.98□□□□□ -1.45
TPM1-222ENST00000560131 ELF2Q15723 593 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 SEPT7Q16181 437 aaKnown RBP5.98□□□□□ -1.45
TPM1-222ENST00000560131 NTRK3Q16288 839 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 NBPF9Q3BBW0 867 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 ANO6Q4KMQ2 910 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 CCDC158Q5M9N0 1113 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 CDCA2Q69YH5 1023 aaPredicted RBP5.98□□□□□ -1.45
TPM1-222ENST00000560131 ATL3Q6DD88 541 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 TMCO3Q6UWJ1 677 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 LHFPL2Q6ZUX7 228 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 RUFY3Q7L099 469 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 ARMCX6Q7L4S7 300 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 SUGP1Q8IWZ8 645 aaKnown RBP5.98□□□□□ -1.45
TPM1-222ENST00000560131 DRC7Q8IY82 874 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms