RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 PLVAPQ9BX97 442 aa10.45□□□□□ -0.74
SNRPA1-208ENST00000559686 MFSD1Q9H3U5 465 aa10.45□□□□□ -0.74
SNRPA1-208ENST00000559686 RC3H2Q9HBD1 1191 aaKnown RBP10.45□□□□□ -0.74
SNRPA1-208ENST00000559686 VAT1LQ9HCJ6 419 aa10.45□□□□□ -0.74
SNRPA1-208ENST00000559686 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 NOP56O00567 594 aaKnown RBP10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 FOXP2O15409 715 aa10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 HOXD8P13378 290 aaPredicted RBP10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 UBA1P22314 1058 aaKnown RBP10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 TECP42680 631 aa10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 SP4Q02446 784 aa10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 LPIN1Q14693 890 aa10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 RUFY4Q6ZNE9 571 aa10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 MCF2L2Q86YR7 1114 aa10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 KIAA2013Q8IYS2 634 aa10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 FLCNQ8NFG4 579 aa10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 IL31RAQ8NI17 732 aa10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 SUSD6Q92537 303 aa10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 P2RX5Q93086 422 aa10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 GPATCH3Q96I76 525 aa10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 CNTNAP3BQ96NU0 1288 aa10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 NEK1Q96PY6 1258 aa10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 CNTNAP3Q9BZ76 1288 aa10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 TELO2Q9Y4R8 837 aa10.44□□□□□ -0.74
SNRPA1-208ENST00000559686 ZFHX4Q86UP3 3567 aa10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 ORC4O43929 436 aa10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 CAND2O75155 1236 aa10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 ASGR2P07307 311 aa10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 ARP10275 920 aa10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 HSPD1P10809 573 aaKnown RBP10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 GNAT1P11488 350 aa10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 ATF7P17544 494 aaPredicted RBP10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 HOXA13P31271 388 aaPredicted RBP10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 HAND2P61296 217 aa10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 MTMR3Q13615 1198 aa10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 FAM26DQ5JW98 314 aa10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 ZMYM1Q5SVZ6 1142 aa10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 PLPP4Q5VZY2 271 aa10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 MCTP2Q6DN12 878 aa10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 ADGRF4Q8IZF3 695 aa10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 LMBR1Q8WVP7 490 aa10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 LINC01599Q8WXQ3 324 aa10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 PDCD2LQ9BRP1 358 aa10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 ZBTB40Q9NUA8 1239 aa10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 SORCS3Q9UPU3 1222 aa10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 MRPL11Q9Y3B7 192 aaKnown RBP10.43□□□□□ -0.74
SNRPA1-208ENST00000559686 PTPRZ1P23471 2315 aaPredicted RBP10.42□□□□□ -0.74
SNRPA1-208ENST00000559686 FAM205CA6NFA0 338 aa10.42□□□□□ -0.74
SNRPA1-208ENST00000559686 C2CD4DB7Z1M9 353 aa10.42□□□□□ -0.74
SNRPA1-208ENST00000559686 HOXC8P31273 242 aa10.42□□□□□ -0.74
SNRPA1-208ENST00000559686 CD52P31358 61 aa10.42□□□□□ -0.74
SNRPA1-208ENST00000559686 APOBRQ0VD83 1088 aa10.42□□□□□ -0.74
SNRPA1-208ENST00000559686 DUSP6Q16828 381 aa10.42□□□□□ -0.74
SNRPA1-208ENST00000559686 QRICH1Q2TAL8 776 aa10.42□□□□□ -0.74
SNRPA1-208ENST00000559686 CMTR2Q8IYT2 770 aaKnown RBP10.42□□□□□ -0.74
SNRPA1-208ENST00000559686 DNAJB3Q8WWF6 145 aa10.42□□□□□ -0.74
SNRPA1-208ENST00000559686 HINFPQ9BQA5 517 aa10.42□□□□□ -0.74
SNRPA1-208ENST00000559686 HCSTQ9UBK5 93 aa10.42□□□□□ -0.74
SNRPA1-208ENST00000559686 ANAPC4Q9UJX5 808 aa10.42□□□□□ -0.74
SNRPA1-208ENST00000559686 LOXHD1Q8IVV2 1947 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 WEE2P0C1S8 567 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 SNHG28P0DPA3 235 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 ERVFC1P60507 584 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 PGM5Q15124 567 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 NAALADL2Q58DX5 795 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 FBXO47Q5MNV8 452 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 GPATCH4Q5T3I0 446 aaKnown RBP10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 ANKRD54Q6NXT1 300 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 KCNV1Q6PIU1 500 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 CYFIP1Q7L576 1253 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 RTN4RL1Q86UN2 441 aaPredicted RBP10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 FCHSD1Q86WN1 690 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 ATP8B4Q8TF62 1192 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 ZBTB10Q96DT7 871 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 HS3ST6Q96QI5 342 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 S1PR5Q9H228 398 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 EHMT1Q9H9B1 1298 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 AGO3Q9H9G7 860 aaKnown RBP10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 TMEM260Q9NX78 707 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 LRFN2Q9ULH4 789 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 NR2E1Q9Y466 385 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 CDY2AQ9Y6F7 541 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 TTC3P53804 2025 aa10.41□□□□□ -0.74
SNRPA1-208ENST00000559686 CACNA1HO95180 2353 aa10.4□□□□□ -0.74
SNRPA1-208ENST00000559686 KAT6AQ92794 2004 aa10.4□□□□□ -0.74
SNRPA1-208ENST00000559686 PI15O43692 258 aa10.4□□□□□ -0.74
SNRPA1-208ENST00000559686 SRGAP2BP0DMP2 458 aa10.4□□□□□ -0.74
SNRPA1-208ENST00000559686 MARK3P27448 753 aa10.4□□□□□ -0.74
SNRPA1-208ENST00000559686 CCND2P30279 289 aa10.4□□□□□ -0.74
SNRPA1-208ENST00000559686 IGBP1P78318 339 aa10.4□□□□□ -0.74
SNRPA1-208ENST00000559686 MGAT3Q09327 533 aa10.4□□□□□ -0.74
SNRPA1-208ENST00000559686 TMEM62Q0P6H9 643 aa10.4□□□□□ -0.74
SNRPA1-208ENST00000559686 SYCE2Q6PIF2 218 aa10.4□□□□□ -0.74
SNRPA1-208ENST00000559686 NPAS4Q8IUM7 802 aa10.4□□□□□ -0.74
SNRPA1-208ENST00000559686 UBALD2Q8IYN6 164 aa10.4□□□□□ -0.74
SNRPA1-208ENST00000559686 THNSL1Q8IYQ7 743 aa10.4□□□□□ -0.74
SNRPA1-208ENST00000559686 USP26Q9BXU7 913 aa10.4□□□□□ -0.74
SNRPA1-208ENST00000559686 FAM49AQ9H0Q0 323 aaPredicted RBP10.4□□□□□ -0.74
SNRPA1-208ENST00000559686 POMKQ9H5K3 350 aa10.4□□□□□ -0.74
SNRPA1-208ENST00000559686 TCP11L1Q9NUJ3 509 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms