RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 RPLP2P05387 115 aaKnown RBP15.02■□□□□ -0
TPM1-220ENST00000559556 IL9P15248 144 aa15.02■□□□□ -0
TPM1-220ENST00000559556 UBE2SQ16763 222 aa15.02■□□□□ -0
TPM1-220ENST00000559556 PUS10Q3MIT2 529 aaKnown RBP15.02■□□□□ -0
TPM1-220ENST00000559556 TCEAL5Q5H9L2 206 aa15.02■□□□□ -0
TPM1-220ENST00000559556 FBXO47Q5MNV8 452 aa15.02■□□□□ -0
TPM1-220ENST00000559556 MARCH8Q5T0T0 291 aa15.02■□□□□ -0
TPM1-220ENST00000559556 TMTC3Q6ZXV5 915 aa15.02■□□□□ -0
TPM1-220ENST00000559556 RSPH3Q86UC2 560 aa15.02■□□□□ -0
TPM1-220ENST00000559556 FIBCD1Q8N539 461 aa15.02■□□□□ -0
TPM1-220ENST00000559556 CLP1Q92989 425 aaKnown RBP15.02■□□□□ -0
TPM1-220ENST00000559556 IL17RAQ96F46 866 aa15.02■□□□□ -0
TPM1-220ENST00000559556 SMARCAD1Q9H4L7 1026 aa15.02■□□□□ -0
TPM1-220ENST00000559556 RWDD3Q9Y3V2 267 aa15.02■□□□□ -0
TPM1-220ENST00000559556 ARID2Q68CP9 1835 aa15.01□□□□□ -0.01
TPM1-220ENST00000559556 CNTNAP5Q8WYK1 1306 aa15.01□□□□□ -0.01
TPM1-220ENST00000559556 SLC27A2O14975 620 aa15.01□□□□□ -0.01
TPM1-220ENST00000559556 RB1P06400 928 aa15.01□□□□□ -0.01
TPM1-220ENST00000559556 MARK3P27448 753 aa15.01□□□□□ -0.01
TPM1-220ENST00000559556 CTNNB1P35222 781 aa15.01□□□□□ -0.01
TPM1-220ENST00000559556 TSHZ1Q6ZSZ6 1077 aa15.01□□□□□ -0.01
TPM1-220ENST00000559556 SGMS1Q86VZ5 419 aa15.01□□□□□ -0.01
TPM1-220ENST00000559556 GJD3Q8N144 294 aa15.01□□□□□ -0.01
TPM1-220ENST00000559556 DNAJB3Q8WWF6 145 aa15.01□□□□□ -0.01
TPM1-220ENST00000559556 GLG1Q92896 1179 aa15.01□□□□□ -0.01
TPM1-220ENST00000559556 LMAN2LQ9H0V9 348 aa15.01□□□□□ -0.01
TPM1-220ENST00000559556 JADE2Q9NQC1 790 aa15.01□□□□□ -0.01
TPM1-220ENST00000559556 USP34Q70CQ2 3546 aa15.01□□□□□ -0.01
TPM1-220ENST00000559556 hCG_1642624A0A1W2PR95 340 aa15□□□□□ -0.01
TPM1-220ENST00000559556 FAM86C2PA6NEL3 165 aa15□□□□□ -0.01
TPM1-220ENST00000559556 H3BQ06 376 aaPredicted RBP15□□□□□ -0.01
TPM1-220ENST00000559556 MRPS6P82932 125 aaKnown RBP15□□□□□ -0.01
TPM1-220ENST00000559556 NECTIN1Q15223 517 aa15□□□□□ -0.01
TPM1-220ENST00000559556 CREB3L3Q68CJ9 461 aa15□□□□□ -0.01
TPM1-220ENST00000559556 TEX2Q8IWB9 1127 aa15□□□□□ -0.01
TPM1-220ENST00000559556 FANCBQ8NB91 859 aa15□□□□□ -0.01
TPM1-220ENST00000559556 ZNF689Q96CS4 500 aaPredicted RBP15□□□□□ -0.01
TPM1-220ENST00000559556 PCYT2Q99447 389 aa15□□□□□ -0.01
TPM1-220ENST00000559556 ESYT1Q9BSJ8 1104 aa15□□□□□ -0.01
TPM1-220ENST00000559556 C11orf84Q9BUA3 381 aaPredicted RBP15□□□□□ -0.01
TPM1-220ENST00000559556 JPH1Q9HDC5 661 aaPredicted RBP15□□□□□ -0.01
TPM1-220ENST00000559556 PCDHA6Q9UN73 950 aa15□□□□□ -0.01
TPM1-220ENST00000559556 PCDHA8Q9Y5H6 950 aa15□□□□□ -0.01
TPM1-220ENST00000559556 SLC12A7Q9Y666 1083 aa15□□□□□ -0.01
TPM1-220ENST00000559556 CDY2AQ9Y6F7 541 aa15□□□□□ -0.01
TPM1-220ENST00000559556 SQORQ9Y6N5 450 aa15□□□□□ -0.01
TPM1-220ENST00000559556 NFASCO94856 1347 aa14.99□□□□□ -0.01
TPM1-220ENST00000559556 RRN3P2A6NIE6 340 aa14.99□□□□□ -0.01
TPM1-220ENST00000559556 ENPP3O14638 875 aa14.99□□□□□ -0.01
TPM1-220ENST00000559556 BMPR1AP36894 532 aa14.99□□□□□ -0.01
TPM1-220ENST00000559556 HEATR3Q7Z4Q2 680 aa14.99□□□□□ -0.01
TPM1-220ENST00000559556 MICU3Q86XE3 530 aa14.99□□□□□ -0.01
TPM1-220ENST00000559556 RAB11FIP4Q86YS3 637 aa14.99□□□□□ -0.01
TPM1-220ENST00000559556 CCDC82Q8N4S0 544 aa14.99□□□□□ -0.01
TPM1-220ENST00000559556 LINC01599Q8WXQ3 324 aa14.99□□□□□ -0.01
TPM1-220ENST00000559556 LRRC2Q9BYS8 371 aa14.99□□□□□ -0.01
TPM1-220ENST00000559556 KCNH7Q9NS40 1196 aa14.99□□□□□ -0.01
TPM1-220ENST00000559556 PKD2L1Q9P0L9 805 aa14.99□□□□□ -0.01
TPM1-220ENST00000559556 SLC9A2Q9UBY0 812 aa14.99□□□□□ -0.01
TPM1-220ENST00000559556 PRKAG3Q9UGI9 489 aa14.99□□□□□ -0.01
TPM1-220ENST00000559556 FAM50BQ9Y247 325 aa14.99□□□□□ -0.01
TPM1-220ENST00000559556 IGSF9BQ9UPX0 1349 aa14.98□□□□□ -0.01
TPM1-220ENST00000559556 GRM6O15303 877 aa14.98□□□□□ -0.01
TPM1-220ENST00000559556 NCK2O43639 380 aa14.98□□□□□ -0.01
TPM1-220ENST00000559556 DGKIO75912 1065 aa14.98□□□□□ -0.01
TPM1-220ENST00000559556 INSRRP14616 1297 aa14.98□□□□□ -0.01
TPM1-220ENST00000559556 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
TPM1-220ENST00000559556 SSTR3P32745 418 aaPredicted RBP14.98□□□□□ -0.01
TPM1-220ENST00000559556 LTBRP36941 435 aa14.98□□□□□ -0.01
TPM1-220ENST00000559556 CTC1Q2NKJ3 1217 aa14.98□□□□□ -0.01
TPM1-220ENST00000559556 WWC2Q6AWC2 1192 aa14.98□□□□□ -0.01
TPM1-220ENST00000559556 PPP1R18Q6NYC8 613 aa14.98□□□□□ -0.01
TPM1-220ENST00000559556 APOA5Q6Q788 366 aa14.98□□□□□ -0.01
TPM1-220ENST00000559556 CRIPAKQ8N1N5 446 aa14.98□□□□□ -0.01
TPM1-220ENST00000559556 MXRA8Q9BRK3 442 aa14.98□□□□□ -0.01
TPM1-220ENST00000559556 PLVAPQ9BX97 442 aa14.98□□□□□ -0.01
TPM1-220ENST00000559556 AGO3Q9H9G7 860 aaKnown RBP14.98□□□□□ -0.01
TPM1-220ENST00000559556 RIC8AQ9NPQ8 531 aa14.98□□□□□ -0.01
TPM1-220ENST00000559556 CLDND1Q9NY35 253 aa14.98□□□□□ -0.01
TPM1-220ENST00000559556 TDRD15B5MCY1 1934 aaKnown RBP14.98□□□□□ -0.01
TPM1-220ENST00000559556 DENND4AQ7Z401 1863 aa14.97□□□□□ -0.01
TPM1-220ENST00000559556 C2orf16Q68DN1 1984 aa14.97□□□□□ -0.01
TPM1-220ENST00000559556 PRR33A8MZF0 331 aa14.97□□□□□ -0.01
TPM1-220ENST00000559556 MMP1P03956 469 aa14.97□□□□□ -0.01
TPM1-220ENST00000559556 CD52P31358 61 aa14.97□□□□□ -0.01
TPM1-220ENST00000559556 IGBP1P78318 339 aa14.97□□□□□ -0.01
TPM1-220ENST00000559556 IRX6P78412 446 aaPredicted RBP14.97□□□□□ -0.01
TPM1-220ENST00000559556 ZP2Q05996 745 aa14.97□□□□□ -0.01
TPM1-220ENST00000559556 BTG3Q14201 252 aaPredicted RBP14.97□□□□□ -0.01
TPM1-220ENST00000559556 IER5Q5VY09 327 aa14.97□□□□□ -0.01
TPM1-220ENST00000559556 TYW1BQ6NUM6 668 aa14.97□□□□□ -0.01
TPM1-220ENST00000559556 PLPPR4Q7Z2D5 763 aa14.97□□□□□ -0.01
TPM1-220ENST00000559556 P2RX5Q93086 422 aa14.97□□□□□ -0.01
TPM1-220ENST00000559556 ZBTB10Q96DT7 871 aa14.97□□□□□ -0.01
TPM1-220ENST00000559556 FTHL17Q9BXU8 183 aa14.97□□□□□ -0.01
TPM1-220ENST00000559556 FAM49AQ9H0Q0 323 aaPredicted RBP14.97□□□□□ -0.01
TPM1-220ENST00000559556 AZI2Q9H6S1 392 aa14.97□□□□□ -0.01
TPM1-220ENST00000559556 ANO2Q9NQ90 1003 aa14.97□□□□□ -0.01
TPM1-220ENST00000559556 RBM28Q9NW13 759 aaKnown RBP14.97□□□□□ -0.01
TPM1-220ENST00000559556 VPS13AQ96RL7 3174 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms