RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 BVESQ8NE79 360 aa6.54□□□□□ -1.36
CASC4-207ENST00000559037 FCRL3Q96P31 734 aaPredicted RBP6.54□□□□□ -1.36
CASC4-207ENST00000559037 NSUN3Q9H649 340 aaKnown RBP6.54□□□□□ -1.36
CASC4-207ENST00000559037 DCP1AQ9NPI6 582 aaPredicted RBP6.54□□□□□ -1.36
CASC4-207ENST00000559037 SUSD2Q9UGT4 822 aa6.54□□□□□ -1.36
CASC4-207ENST00000559037 OR14I1A6ND48 311 aa6.53□□□□□ -1.36
CASC4-207ENST00000559037 NOP56O00567 594 aaKnown RBP6.53□□□□□ -1.36
CASC4-207ENST00000559037 ABLIM1O14639 778 aa6.53□□□□□ -1.36
CASC4-207ENST00000559037 AURKAO14965 403 aa6.53□□□□□ -1.36
CASC4-207ENST00000559037 SEMA7AO75326 666 aa6.53□□□□□ -1.36
CASC4-207ENST00000559037 TSPAN15O95858 294 aa6.53□□□□□ -1.36
CASC4-207ENST00000559037 ETFBP38117 255 aa6.53□□□□□ -1.36
CASC4-207ENST00000559037 CRKLP46109 303 aaKnown RBP6.53□□□□□ -1.36
CASC4-207ENST00000559037 SLC39A6Q13433 755 aa6.53□□□□□ -1.36
CASC4-207ENST00000559037 PPP2R5DQ14738 602 aa6.53□□□□□ -1.36
CASC4-207ENST00000559037 GPR162Q16538 588 aa6.53□□□□□ -1.36
CASC4-207ENST00000559037 JAMLQ86YT9 394 aa6.53□□□□□ -1.36
CASC4-207ENST00000559037 NLGN1Q8N2Q7 840 aa6.53□□□□□ -1.36
CASC4-207ENST00000559037 ADCY4Q8NFM4 1077 aa6.53□□□□□ -1.36
CASC4-207ENST00000559037 CFAP53Q96M91 514 aa6.53□□□□□ -1.36
CASC4-207ENST00000559037 FGD4Q96M96 766 aa6.53□□□□□ -1.36
CASC4-207ENST00000559037 PTCHD1Q96NR3 888 aa6.53□□□□□ -1.36
CASC4-207ENST00000559037 ACSL6Q9UKU0 697 aa6.53□□□□□ -1.36
CASC4-207ENST00000559037 KCPQ6ZWJ8 1503 aa6.53□□□□□ -1.36
CASC4-207ENST00000559037 NUP98P52948 1817 aa6.53□□□□□ -1.36
CASC4-207ENST00000559037 CCER2I3L3R5 266 aa6.52□□□□□ -1.37
CASC4-207ENST00000559037 C8AP07357 584 aa6.52□□□□□ -1.37
CASC4-207ENST00000559037 CYP19A1P11511 503 aaPredicted RBP6.52□□□□□ -1.37
CASC4-207ENST00000559037 GYS1P13807 737 aa6.52□□□□□ -1.37
CASC4-207ENST00000559037 PRKAR2BP31323 418 aa6.52□□□□□ -1.37
CASC4-207ENST00000559037 ERVFRD-1P60508 538 aa6.52□□□□□ -1.37
CASC4-207ENST00000559037 NAALADL2Q58DX5 795 aa6.52□□□□□ -1.37
CASC4-207ENST00000559037 LARP1BQ659C4 914 aaKnown RBP6.52□□□□□ -1.37
CASC4-207ENST00000559037 C6orf15Q6UXA7 325 aaPredicted RBP6.52□□□□□ -1.37
CASC4-207ENST00000559037 ZPBP2Q6X784 338 aa6.52□□□□□ -1.37
CASC4-207ENST00000559037 EEPD1Q7L9B9 569 aa6.52□□□□□ -1.37
CASC4-207ENST00000559037 DNAJC10Q8IXB1 793 aa6.52□□□□□ -1.37
CASC4-207ENST00000559037 ZNF513Q8N8E2 541 aaPredicted RBP6.52□□□□□ -1.37
CASC4-207ENST00000559037 DIRC2Q96SL1 478 aa6.52□□□□□ -1.37
CASC4-207ENST00000559037 AKT3Q9Y243 479 aa6.52□□□□□ -1.37
CASC4-207ENST00000559037 NUDCQ9Y266 331 aa6.52□□□□□ -1.37
CASC4-207ENST00000559037 EMC9Q9Y3B6 208 aa6.52□□□□□ -1.37
CASC4-207ENST00000559037 BACE2Q9Y5Z0 518 aa6.52□□□□□ -1.37
CASC4-207ENST00000559037 CEMIPQ8WUJ3 1361 aa6.52□□□□□ -1.37
CASC4-207ENST00000559037 NRXN2Q9P2S2 1712 aa6.51□□□□□ -1.37
CASC4-207ENST00000559037 MMP10P09238 476 aa6.51□□□□□ -1.37
CASC4-207ENST00000559037 U2AF1L5P0DN76 240 aaPredicted RBP6.51□□□□□ -1.37
CASC4-207ENST00000559037 TM4SF1P30408 202 aa6.51□□□□□ -1.37
CASC4-207ENST00000559037 RFC4P35249 363 aa6.51□□□□□ -1.37
CASC4-207ENST00000559037 PDE6BP35913 854 aa6.51□□□□□ -1.37
CASC4-207ENST00000559037 SEPHS1P49903 392 aa6.51□□□□□ -1.37
CASC4-207ENST00000559037 U2AF1Q01081 240 aaKnown RBP eCLIP6.51□□□□□ -1.37
CASC4-207ENST00000559037 ZNF648Q5T619 568 aaPredicted RBP6.51□□□□□ -1.37
CASC4-207ENST00000559037 ARMC5Q96C12 935 aa6.51□□□□□ -1.37
CASC4-207ENST00000559037 ZNF552Q9H707 407 aaPredicted RBP6.51□□□□□ -1.37
CASC4-207ENST00000559037 SOS1Q07889 1333 aaPredicted RBP6.5□□□□□ -1.37
CASC4-207ENST00000559037 DICER1Q9UPY3 1922 aaKnown RBP6.5□□□□□ -1.37
CASC4-207ENST00000559037 ANKRD31Q8N7Z5 1873 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 KDM3BQ7LBC6 1761 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 A0A1W2PQ27 194 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 A0A1W2PQ64 194 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 A0A1W2PQC6 194 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 A0A1W2PQD8 194 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 C2orf71A6NGG8 1288 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 AGRPO00253 132 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 HTATSF1O43719 755 aaKnown RBP6.5□□□□□ -1.37
CASC4-207ENST00000559037 SUSD5O60279 629 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 DDAH1O94760 285 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 MED14OSP0DP75 135 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 IFNGR1P15260 489 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 GLDCP23378 1020 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 L1CAMP32004 1257 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 EIF5P55010 431 aaKnown RBP6.5□□□□□ -1.37
CASC4-207ENST00000559037 CYP4F8P98187 520 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 ADGRF1Q5T601 910 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 ZNF790Q6PG37 636 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 TRIM59Q8IWR1 403 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 TMEM52Q8NDY8 209 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 ZNF496Q96IT1 587 aaPredicted RBP6.5□□□□□ -1.37
CASC4-207ENST00000559037 JMJD8Q96S16 334 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 PLCD4Q9BRC7 762 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 NARFQ9UHQ1 456 aa6.5□□□□□ -1.37
CASC4-207ENST00000559037 USP42Q9H9J4 1324 aaKnown RBP6.5□□□□□ -1.37
CASC4-207ENST00000559037 DLEC1Q9Y238 1755 aa6.49□□□□□ -1.37
CASC4-207ENST00000559037 HEG1Q9ULI3 1381 aa6.49□□□□□ -1.37
CASC4-207ENST00000559037 STXBP3O00186 592 aa6.49□□□□□ -1.37
CASC4-207ENST00000559037 NFIBO00712 420 aa6.49□□□□□ -1.37
CASC4-207ENST00000559037 KCNQ3O43525 872 aa6.49□□□□□ -1.37
CASC4-207ENST00000559037 MPOP05164 745 aa6.49□□□□□ -1.37
CASC4-207ENST00000559037 PRKCAP17252 672 aa6.49□□□□□ -1.37
CASC4-207ENST00000559037 TGFB2P61812 414 aa6.49□□□□□ -1.37
CASC4-207ENST00000559037 TEFQ10587 303 aa6.49□□□□□ -1.37
CASC4-207ENST00000559037 DDX10Q13206 875 aaKnown RBP6.49□□□□□ -1.37
CASC4-207ENST00000559037 SYDE1Q6ZW31 735 aaPredicted RBP6.49□□□□□ -1.37
CASC4-207ENST00000559037 ANKS3Q6ZW76 656 aa6.49□□□□□ -1.37
CASC4-207ENST00000559037 NUP43Q8NFH3 380 aa6.49□□□□□ -1.37
CASC4-207ENST00000559037 CCDC140Q96MF4 163 aa6.49□□□□□ -1.37
CASC4-207ENST00000559037 YTHDC1Q96MU7 727 aaKnown RBP6.49□□□□□ -1.37
CASC4-207ENST00000559037 PLEKHF1Q96S99 279 aa6.49□□□□□ -1.37
CASC4-207ENST00000559037 TEX13AQ9BXU3 409 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms