RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 LRRC8AQ8IWT6 810 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 MLKLQ8NB16 471 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 GIMAP8Q8ND71 665 aaPredicted RBP8.6□□□□□ -1.03
LRRC28-211ENST00000558890 KLHDC9Q8NEP7 349 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 OXER1Q8TDS5 423 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 TBCKQ8TEA7 893 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 CACTINQ8WUQ7 758 aaKnown RBP8.6□□□□□ -1.03
LRRC28-211ENST00000558890 FAM20AQ96MK3 541 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 SENP7Q9BQF6 1050 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 TMEM106CQ9BVX2 250 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 XPO4Q9C0E2 1151 aaKnown RBP8.6□□□□□ -1.03
LRRC28-211ENST00000558890 ABHD16BQ9H3Z7 469 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 IFNKQ9P0W0 207 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 DDX20Q9UHI6 824 aaKnown RBP8.6□□□□□ -1.03
LRRC28-211ENST00000558890 UBIAD1Q9Y5Z9 338 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 STK24Q9Y6E0 443 aa8.6□□□□□ -1.03
LRRC28-211ENST00000558890 NFASCO94856 1347 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 IGLV3-22A0A075B6J6 115 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 KIF2AO00139 706 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-211ENST00000558890 MEIS1O00470 390 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 NKRFO15226 690 aaKnown RBP eCLIP8.59□□□□□ -1.03
LRRC28-211ENST00000558890 POLR2DO15514 142 aaKnown RBP8.59□□□□□ -1.03
LRRC28-211ENST00000558890 CCP110O43303 1012 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 ADAMTS4O75173 837 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 SKILP12757 684 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 SFPQP23246 707 aaKnown RBP eCLIP8.59□□□□□ -1.03
LRRC28-211ENST00000558890 HOXA13P31271 388 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-211ENST00000558890 TXLNAP40222 546 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 FANCCQ00597 558 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 HSP90AA2PQ14568 343 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-211ENST00000558890 NCAPHQ15003 741 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 UBE2SQ16763 222 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 LONRF3Q496Y0 759 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 CEP55Q53EZ4 464 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 CT47A1Q5JQC4 288 aaPredicted RBP8.59□□□□□ -1.03
LRRC28-211ENST00000558890 CCDC62Q6P9F0 684 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 PIK3AP1Q6ZUJ8 805 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 SLFN12Q8IYM2 578 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 IL31RAQ8NI17 732 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 DIS3LQ8TF46 1054 aaKnown RBP8.59□□□□□ -1.03
LRRC28-211ENST00000558890 RIT2Q99578 217 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 CSRNP2Q9H175 543 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 UPF3AQ9H1J1 476 aaKnown RBP8.59□□□□□ -1.03
LRRC28-211ENST00000558890 JADE2Q9NQC1 790 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 SERTAD1Q9UHV2 236 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 MAN1B1Q9UKM7 699 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 Q9Y3F1 56 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 PCDHA5Q9Y5H7 936 aa8.59□□□□□ -1.03
LRRC28-211ENST00000558890 MSCO60682 206 aa8.58□□□□□ -1.04
LRRC28-211ENST00000558890 TFRCP02786 760 aaKnown RBP8.58□□□□□ -1.04
LRRC28-211ENST00000558890 TNNT1P13805 278 aa8.58□□□□□ -1.04
LRRC28-211ENST00000558890 SMPD1P17405 629 aa8.58□□□□□ -1.04
LRRC28-211ENST00000558890 GJA9P57773 515 aa8.58□□□□□ -1.04
LRRC28-211ENST00000558890 MRPS9P82933 396 aaKnown RBP8.58□□□□□ -1.04
LRRC28-211ENST00000558890 ATP2C1P98194 919 aaPredicted RBP8.58□□□□□ -1.04
LRRC28-211ENST00000558890 PDE4DQ08499 809 aa8.58□□□□□ -1.04
LRRC28-211ENST00000558890 SPECC1Q5M775 1068 aa8.58□□□□□ -1.04
LRRC28-211ENST00000558890 JAKMIP3Q5VZ66 844 aa8.58□□□□□ -1.04
LRRC28-211ENST00000558890 IQSEC1Q6DN90 963 aa8.58□□□□□ -1.04
LRRC28-211ENST00000558890 ISM2Q6H9L7 571 aa8.58□□□□□ -1.04
LRRC28-211ENST00000558890 ANKLE1Q8NAG6 615 aa8.58□□□□□ -1.04
LRRC28-211ENST00000558890 CCDC112Q8NEF3 446 aa8.58□□□□□ -1.04
LRRC28-211ENST00000558890 RDM1Q8NG50 284 aa8.58□□□□□ -1.04
LRRC28-211ENST00000558890 SCFD2Q8WU76 684 aa8.58□□□□□ -1.04
LRRC28-211ENST00000558890 EMID1Q96A84 441 aaPredicted RBP8.58□□□□□ -1.04
LRRC28-211ENST00000558890 LENG1Q96BZ8 264 aaPredicted RBP8.58□□□□□ -1.04
LRRC28-211ENST00000558890 DHX58Q96C10 678 aa8.58□□□□□ -1.04
LRRC28-211ENST00000558890 MXRA8Q9BRK3 442 aa8.58□□□□□ -1.04
LRRC28-211ENST00000558890 KCNMB3Q9NPA1 279 aa8.58□□□□□ -1.04
LRRC28-211ENST00000558890 TBC1D22BQ9NU19 505 aa8.58□□□□□ -1.04
LRRC28-211ENST00000558890 PAXBP1Q9Y5B6 917 aa8.58□□□□□ -1.04
LRRC28-211ENST00000558890 FRMPD3Q5JV73 1810 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 MYADML2A6NDP7 307 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 ACTN4O43707 911 aaKnown RBP8.57□□□□□ -1.04
LRRC28-211ENST00000558890 DUSP11O75319 330 aaKnown RBP8.57□□□□□ -1.04
LRRC28-211ENST00000558890 ARIH2O95376 493 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 SLFN14P0C7P3 912 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 MUTP22033 750 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 CST5P28325 142 aaPredicted RBP8.57□□□□□ -1.04
LRRC28-211ENST00000558890 GTF2F1P35269 517 aaKnown RBP eCLIP8.57□□□□□ -1.04
LRRC28-211ENST00000558890 ADCYAP1R1P41586 468 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 KCNJ6P48051 423 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 UBASH3AP57075 661 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 CCZ1BP86790 482 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 CCZ1P86791 482 aaPredicted RBP8.57□□□□□ -1.04
LRRC28-211ENST00000558890 GRIN1Q05586 938 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 SEMA3FQ13275 785 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 MTMR1Q13613 665 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 MORC3Q14149 939 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 LRRC41Q15345 812 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 ZNF174Q15697 407 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 INF2Q27J81 1249 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 DUSP28Q4G0W2 176 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 NT5DC1Q5TFE4 455 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 FCHSD1Q86WN1 690 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 FBXO16Q8IX29 292 aaPredicted RBP8.57□□□□□ -1.04
LRRC28-211ENST00000558890 PDILTQ8N807 584 aa8.57□□□□□ -1.04
LRRC28-211ENST00000558890 ENOX1Q8TC92 643 aaKnown RBP8.57□□□□□ -1.04
LRRC28-211ENST00000558890 SYMPKQ92797 1274 aaKnown RBP8.57□□□□□ -1.04
LRRC28-211ENST00000558890 LENG9Q96B70 501 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms