RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 MARK3P27448 753 aa19.39■□□□□ 0.69
LRRC28-210ENST00000558879 ACTR2P61160 394 aa19.39■□□□□ 0.69
LRRC28-210ENST00000558879 CCT2P78371 535 aaKnown RBP19.39■□□□□ 0.69
LRRC28-210ENST00000558879 TAP1Q03518 808 aa19.39■□□□□ 0.69
LRRC28-210ENST00000558879 IKBKEQ14164 716 aa19.39■□□□□ 0.69
LRRC28-210ENST00000558879 GRIK4Q16099 956 aa19.39■□□□□ 0.69
LRRC28-210ENST00000558879 MARCH8Q5T0T0 291 aa19.39■□□□□ 0.69
LRRC28-210ENST00000558879 TAF2Q6P1X5 1199 aa19.39■□□□□ 0.69
LRRC28-210ENST00000558879 TMCO2Q7Z6W1 182 aaPredicted RBP19.39■□□□□ 0.69
LRRC28-210ENST00000558879 DBF4BQ8NFT6 615 aa19.39■□□□□ 0.69
LRRC28-210ENST00000558879 SLC26A6Q9BXS9 759 aa19.39■□□□□ 0.69
LRRC28-210ENST00000558879 UPF3BQ9BZI7 483 aaKnown RBP19.39■□□□□ 0.69
LRRC28-210ENST00000558879 IGKV6D-21A0A0A0MT36 114 aa19.38■□□□□ 0.69
LRRC28-210ENST00000558879 KIF28PB7ZC32 967 aa19.38■□□□□ 0.69
LRRC28-210ENST00000558879 TLL1O43897 1013 aa19.38■□□□□ 0.69
LRRC28-210ENST00000558879 GNA11P29992 359 aa19.38■□□□□ 0.69
LRRC28-210ENST00000558879 MGAT3Q09327 533 aa19.38■□□□□ 0.69
LRRC28-210ENST00000558879 RUFY4Q6ZNE9 571 aa19.38■□□□□ 0.69
LRRC28-210ENST00000558879 GLG1Q92896 1179 aa19.38■□□□□ 0.69
LRRC28-210ENST00000558879 ZNF274Q96GC6 653 aaPredicted RBP19.38■□□□□ 0.69
LRRC28-210ENST00000558879 TUBE1Q9UJT0 475 aa19.38■□□□□ 0.69
LRRC28-210ENST00000558879 LCHNA4D1U4 455 aa19.37■□□□□ 0.69
LRRC28-210ENST00000558879 EPOPA6NHQ4 379 aa19.37■□□□□ 0.69
LRRC28-210ENST00000558879 DHX15O43143 795 aaKnown RBP19.37■□□□□ 0.69
LRRC28-210ENST00000558879 CCNE2O96020 404 aa19.37■□□□□ 0.69
LRRC28-210ENST00000558879 CIITAP33076 1130 aa19.37■□□□□ 0.69
LRRC28-210ENST00000558879 SETQ01105 290 aaPredicted RBP19.37■□□□□ 0.69
LRRC28-210ENST00000558879 AKAP17AQ02040 695 aaKnown RBP19.37■□□□□ 0.69
LRRC28-210ENST00000558879 SPRED2Q7Z698 418 aa19.37■□□□□ 0.69
LRRC28-210ENST00000558879 PLA2G4DQ86XP0 818 aa19.37■□□□□ 0.69
LRRC28-210ENST00000558879 SH3GLB2Q9NR46 395 aa19.37■□□□□ 0.69
LRRC28-210ENST00000558879 VPS54Q9P1Q0 977 aa19.37■□□□□ 0.69
LRRC28-210ENST00000558879 DLL1O00548 723 aa19.36■□□□□ 0.69
LRRC28-210ENST00000558879 PPFIA3O75145 1194 aa19.36■□□□□ 0.69
LRRC28-210ENST00000558879 POU3F3P20264 500 aaPredicted RBP19.36■□□□□ 0.69
LRRC28-210ENST00000558879 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.36■□□□□ 0.69
LRRC28-210ENST00000558879 PLPPR4Q7Z2D5 763 aa19.36■□□□□ 0.69
LRRC28-210ENST00000558879 BICD2Q8TD16 824 aa19.36■□□□□ 0.69
LRRC28-210ENST00000558879 RASGRP4Q8TDF6 673 aa19.36■□□□□ 0.69
LRRC28-210ENST00000558879 LENG9Q96B70 501 aa19.36■□□□□ 0.69
LRRC28-210ENST00000558879 AZI2Q9H6S1 392 aa19.36■□□□□ 0.69
LRRC28-210ENST00000558879 ARID2Q68CP9 1835 aa19.36■□□□□ 0.69
LRRC28-210ENST00000558879 VCANP13611 3396 aa19.35■□□□□ 0.69
LRRC28-210ENST00000558879 FNDC1Q4ZHG4 1894 aaPredicted RBP19.35■□□□□ 0.69
LRRC28-210ENST00000558879 EDIL3O43854 480 aa19.35■□□□□ 0.69
LRRC28-210ENST00000558879 CHRNA1P02708 482 aa19.35■□□□□ 0.69
LRRC28-210ENST00000558879 INSRRP14616 1297 aa19.35■□□□□ 0.69
LRRC28-210ENST00000558879 ZNF76P36508 570 aa19.35■□□□□ 0.69
LRRC28-210ENST00000558879 SLC26A2P50443 739 aa19.35■□□□□ 0.69
LRRC28-210ENST00000558879 PLCB4Q15147 1175 aa19.35■□□□□ 0.69
LRRC28-210ENST00000558879 ABHD15Q6UXT9 468 aa19.35■□□□□ 0.69
LRRC28-210ENST00000558879 CCDC60Q8IWA6 550 aaPredicted RBP19.35■□□□□ 0.69
LRRC28-210ENST00000558879 SEPT8Q92599 483 aa19.35■□□□□ 0.69
LRRC28-210ENST00000558879 APBB2Q92870 758 aa19.35■□□□□ 0.69
LRRC28-210ENST00000558879 IL17RAQ96F46 866 aa19.35■□□□□ 0.69
LRRC28-210ENST00000558879 RAD9AQ99638 391 aa19.35■□□□□ 0.69
LRRC28-210ENST00000558879 BRWD1Q9NSI6 2320 aa19.35■□□□□ 0.69
LRRC28-210ENST00000558879 RRN3P2A6NIE6 340 aa19.34■□□□□ 0.69
LRRC28-210ENST00000558879 IPO5O00410 1097 aaKnown RBP19.34■□□□□ 0.69
LRRC28-210ENST00000558879 DEXIO95424 95 aa19.34■□□□□ 0.69
LRRC28-210ENST00000558879 RPLP2P05387 115 aaKnown RBP19.34■□□□□ 0.69
LRRC28-210ENST00000558879 STAT5BP51692 787 aa19.34■□□□□ 0.69
LRRC28-210ENST00000558879 HTRA4P83105 476 aaPredicted RBP19.34■□□□□ 0.69
LRRC28-210ENST00000558879 NPY5RQ15761 445 aa19.34■□□□□ 0.69
LRRC28-210ENST00000558879 TRIM22Q8IYM9 498 aa19.34■□□□□ 0.69
LRRC28-210ENST00000558879 COL25A1Q9BXS0 654 aaPredicted RBP19.34■□□□□ 0.69
LRRC28-210ENST00000558879 IFIH1Q9BYX4 1025 aaKnown RBP19.34■□□□□ 0.69
LRRC28-210ENST00000558879 PDRG1Q9NUG6 133 aa19.34■□□□□ 0.69
LRRC28-210ENST00000558879 SPTBN5Q9NRC6 3674 aaKnown RBP19.33■□□□□ 0.69
LRRC28-210ENST00000558879 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.33■□□□□ 0.68
LRRC28-210ENST00000558879 M0R2N6 131 aa19.33■□□□□ 0.68
LRRC28-210ENST00000558879 DDX39AO00148 427 aaKnown RBP19.33■□□□□ 0.68
LRRC28-210ENST00000558879 AMHP03971 560 aa19.33■□□□□ 0.68
LRRC28-210ENST00000558879 IGFBP4P22692 258 aa19.33■□□□□ 0.68
LRRC28-210ENST00000558879 ANAPC15P60006 121 aa19.33■□□□□ 0.68
LRRC28-210ENST00000558879 FAM177A1Q8N128 213 aaPredicted RBP19.33■□□□□ 0.68
LRRC28-210ENST00000558879 DAGLBQ8NCG7 672 aa19.33■□□□□ 0.68
LRRC28-210ENST00000558879 SP7Q8TDD2 431 aaPredicted RBP19.33■□□□□ 0.68
LRRC28-210ENST00000558879 DNAJB3Q8WWF6 145 aa19.33■□□□□ 0.68
LRRC28-210ENST00000558879 ZBTB10Q96DT7 871 aa19.33■□□□□ 0.68
LRRC28-210ENST00000558879 LARP6Q9BRS8 491 aaKnown RBP19.33■□□□□ 0.68
LRRC28-210ENST00000558879 ZNF577Q9BSK1 485 aa19.33■□□□□ 0.68
LRRC28-210ENST00000558879 CERS4Q9HA82 394 aa19.33■□□□□ 0.68
LRRC28-210ENST00000558879 TRPC6Q9Y210 931 aa19.33■□□□□ 0.68
LRRC28-210ENST00000558879 TCF20Q9UGU0 1960 aaKnown RBP19.33■□□□□ 0.68
LRRC28-210ENST00000558879 COL1A2P08123 1366 aa19.32■□□□□ 0.68
LRRC28-210ENST00000558879 LINC01553A4QN01 128 aa19.32■□□□□ 0.68
LRRC28-210ENST00000558879 RFXAPO00287 272 aa19.32■□□□□ 0.68
LRRC28-210ENST00000558879 LPXNO60711 386 aa19.32■□□□□ 0.68
LRRC28-210ENST00000558879 IGBP1P78318 339 aa19.32■□□□□ 0.68
LRRC28-210ENST00000558879 SSRP1Q08945 709 aaKnown RBP19.32■□□□□ 0.68
LRRC28-210ENST00000558879 LPIN1Q14693 890 aa19.32■□□□□ 0.68
LRRC28-210ENST00000558879 ZNF746Q6NUN9 644 aaPredicted RBP19.32■□□□□ 0.68
LRRC28-210ENST00000558879 RSPH3Q86UC2 560 aa19.32■□□□□ 0.68
LRRC28-210ENST00000558879 MYOCDQ8IZQ8 938 aa19.32■□□□□ 0.68
LRRC28-210ENST00000558879 TRAPPC12Q8WVT3 735 aa19.32■□□□□ 0.68
LRRC28-210ENST00000558879 TNPO1Q92973 898 aaKnown RBP19.32■□□□□ 0.68
LRRC28-210ENST00000558879 ZBED2Q9BTP6 218 aa19.32■□□□□ 0.68
LRRC28-210ENST00000558879 PRDM6Q9NQX0 595 aa19.32■□□□□ 0.68
LRRC28-210ENST00000558879 TBC1D22BQ9NU19 505 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms