RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 EEF1GP26641 437 aaKnown RBP11.95□□□□□ -0.5
CSPG4P5-201ENST00000558731 EPHX2P34913 555 aa11.95□□□□□ -0.5
CSPG4P5-201ENST00000558731 TMEM132BQ14DG7 1078 aa11.95□□□□□ -0.5
CSPG4P5-201ENST00000558731 TKFCQ3LXA3 575 aa11.95□□□□□ -0.5
CSPG4P5-201ENST00000558731 CLEC4DQ8WXI8 215 aa11.95□□□□□ -0.5
CSPG4P5-201ENST00000558731 DNAJC19Q96DA6 116 aa11.95□□□□□ -0.5
CSPG4P5-201ENST00000558731 TEX13BQ9BXU2 312 aa11.95□□□□□ -0.5
CSPG4P5-201ENST00000558731 IRX2Q9BZI1 471 aaPredicted RBP11.95□□□□□ -0.5
CSPG4P5-201ENST00000558731 THAP9Q9H5L6 903 aa11.95□□□□□ -0.5
CSPG4P5-201ENST00000558731 SPTLC3Q9NUV7 552 aa11.95□□□□□ -0.5
CSPG4P5-201ENST00000558731 SIPA1L1O43166 1804 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 CYP3A7-CYP3A51PA0A087WV96 503 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 PIK3CDO00329 1044 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 TBX3O15119 743 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 MFAP3LO75121 409 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 NR3C2P08235 984 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 CYP3A7P24462 503 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 NAP1L1P55209 391 aaKnown RBP11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 NPEPPSP55786 919 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 GUF1Q8N442 669 aaKnown RBP11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 AGPAT5Q9NUQ2 364 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 LIMA1Q9UHB6 759 aaKnown RBP11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 VAV3Q9UKW4 847 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 FOCADQ5VW36 1801 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 RNF225M0QZC1 329 aaPredicted RBP11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 CETN3O15182 167 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 CNTN2Q02246 1040 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 ARSHQ5FYA8 562 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 FAM102BQ5T8I3 360 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 PLCD3Q8N3E9 789 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 TFR2Q9UP52 801 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 LGALS16A8MUM7 142 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 CCDC175P0C221 793 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 DNM2P50570 870 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 FKBP3Q00688 224 aaKnown RBP11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 SETQ01105 290 aaPredicted RBP11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 SPIRE1Q08AE8 756 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 MOXD1Q6UVY6 613 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 KIAA1328Q86T90 577 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 NACC1Q96RE7 527 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 PDCD2LQ9BRP1 358 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 HOXC10Q9NYD6 342 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 COL4A3BPQ9Y5P4 624 aa11.94□□□□□ -0.5
CSPG4P5-201ENST00000558731 K7ENM7 598 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 CIITAP33076 1130 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 DNA2P51530 1060 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 SLC12A3P55017 1021 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 MRPS9P82933 396 aaKnown RBP11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 APBA1Q02410 837 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 GIT2Q14161 759 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 NAA30Q147X3 362 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 PGM5Q15124 567 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 CHP1Q99653 195 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 NDST4Q9H3R1 872 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 PCIF1Q9H4Z3 704 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 ACAD9Q9H845 621 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 GPRC5CQ9NQ84 441 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 GUCA1BQ9UMX6 200 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 A0A0U1RQJ8 604 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 PSMD10O75832 226 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 CT47A1Q5JQC4 288 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 RINT1Q6NUQ1 792 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 RRAGAQ7L523 313 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 APTXQ7Z2E3 356 aaKnown RBP11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 ZNF397Q8NF99 534 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 ATRIPQ8WXE1 791 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 WRAP73Q9P2S5 460 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 SYNPO2Q9UMS6 1093 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 C19orf81C9J6K1 198 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 EYA4O95677 639 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 PGK2P07205 417 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 POTEJP0CG39 1038 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 DSG3P32926 999 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 SOX10P56693 466 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 PADI6Q6TGC4 694 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 SYT2Q8N9I0 419 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 SCFD1Q8WVM8 642 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 DRC1Q96MC2 740 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 PARVGQ9HBI0 331 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 A1CFQ9NQ94 594 aaKnown RBP11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 PXMP2Q9NR77 195 aa11.93□□□□□ -0.5
CSPG4P5-201ENST00000558731 RGPD3A6NKT7 1758 aaPredicted RBP11.92□□□□□ -0.5
CSPG4P5-201ENST00000558731 RGPD4Q7Z3J3 1758 aa11.92□□□□□ -0.5
CSPG4P5-201ENST00000558731 PCNTO95613 3336 aa11.92□□□□□ -0.5
CSPG4P5-201ENST00000558731 ITGB3BPQ13352 177 aaPredicted RBP11.92□□□□□ -0.5
CSPG4P5-201ENST00000558731 RAD9BQ6WBX8 426 aa11.92□□□□□ -0.5
CSPG4P5-201ENST00000558731 NEK11Q8NG66 645 aa11.92□□□□□ -0.5
CSPG4P5-201ENST00000558731 CDCA5Q96FF9 252 aa11.92□□□□□ -0.5
CSPG4P5-201ENST00000558731 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.92□□□□□ -0.5
CSPG4P5-201ENST00000558731 SPDYE16A6NNV3 312 aaPredicted RBP11.92□□□□□ -0.5
CSPG4P5-201ENST00000558731 STX10O60499 249 aa11.92□□□□□ -0.5
CSPG4P5-201ENST00000558731 CCND2P30279 289 aa11.92□□□□□ -0.5
CSPG4P5-201ENST00000558731 PPP1R2P41236 205 aa11.92□□□□□ -0.5
CSPG4P5-201ENST00000558731 HS2ST1Q7LGA3 356 aa11.92□□□□□ -0.5
CSPG4P5-201ENST00000558731 NSUN6Q8TEA1 469 aaKnown RBP11.92□□□□□ -0.5
CSPG4P5-201ENST00000558731 ZBTB9Q96C00 473 aa11.92□□□□□ -0.5
CSPG4P5-201ENST00000558731 ABHD10Q9NUJ1 306 aa11.92□□□□□ -0.5
CSPG4P5-201ENST00000558731 GABBR1Q9UBS5 961 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms