RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 PPP1R18Q6NYC8 613 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 APOA5Q6Q788 366 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 TMTC3Q6ZXV5 915 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 CYFIP1Q7L576 1253 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 SERINC5Q86VE9 423 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 TEX2Q8IWB9 1127 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 SRBD1Q8N5C6 995 aaKnown RBP9.25□□□□□ -0.93
TRAF3-205ENST00000558700 ZNF713Q8N859 430 aaPredicted RBP9.25□□□□□ -0.93
TRAF3-205ENST00000558700 GIMAP8Q8ND71 665 aaPredicted RBP9.25□□□□□ -0.93
TRAF3-205ENST00000558700 PPM1EQ8WY54 764 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 GPRASP2Q96D09 838 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 CDHR1Q96JP9 859 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 SENP7Q9BQF6 1050 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 USP26Q9BXU7 913 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 TUT1Q9H6E5 874 aaKnown RBP9.25□□□□□ -0.93
TRAF3-205ENST00000558700 PSTPIP2Q9H939 334 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 RBM28Q9NW13 759 aaKnown RBP9.25□□□□□ -0.93
TRAF3-205ENST00000558700 EYSQ5T1H1 3165 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 CDH23Q9H251 3354 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 CNTNAP5Q8WYK1 1306 aa9.25□□□□□ -0.93
TRAF3-205ENST00000558700 KAT6AQ92794 2004 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 COL4A6Q14031 1691 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 NBNO60934 754 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 SMIM10L2AP0DMW4 78 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 SMIM10L2BP0DMW5 78 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 SP4Q02446 784 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 SEMA3FQ13275 785 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 IKBKEQ14164 716 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 ZNF618Q5T7W0 954 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 HEATR3Q7Z4Q2 680 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 TRIM50Q86XT4 487 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 RAB11FIP4Q86YS3 637 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 MICALL1Q8N3F8 863 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 FANCBQ8NB91 859 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 ATXN2LQ8WWM7 1075 aaKnown RBP9.24□□□□□ -0.93
TRAF3-205ENST00000558700 ATP6V0A1Q93050 837 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 WNT8BQ93098 351 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 NEK1Q96PY6 1258 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 GPR20Q99678 358 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 ZBED2Q9BTP6 218 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 LRRC2Q9BYS8 371 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 RTEL1Q9NZ71 1219 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 LHX6Q9UPM6 363 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 CHD7Q9P2D1 2997 aa9.24□□□□□ -0.93
TRAF3-205ENST00000558700 PRUNE2Q8WUY3 3088 aa9.23□□□□□ -0.93
TRAF3-205ENST00000558700 GOLGA8AA7E2F4 631 aa9.23□□□□□ -0.93
TRAF3-205ENST00000558700 GOLGA8BA8MQT2 603 aa9.23□□□□□ -0.93
TRAF3-205ENST00000558700 RSPH10B2B2RC85 870 aa9.23□□□□□ -0.93
TRAF3-205ENST00000558700 ZBTB43O43298 467 aa9.23□□□□□ -0.93
TRAF3-205ENST00000558700 LGR5O75473 907 aa9.23□□□□□ -0.93
TRAF3-205ENST00000558700 HMGB1P09429 215 aaKnown RBP9.23□□□□□ -0.93
TRAF3-205ENST00000558700 RSPH10BP0C881 870 aa9.23□□□□□ -0.93
TRAF3-205ENST00000558700 THPOP40225 353 aa9.23□□□□□ -0.93
TRAF3-205ENST00000558700 RCAN1P53805 252 aa9.23□□□□□ -0.93
TRAF3-205ENST00000558700 NAPAP54920 295 aa9.23□□□□□ -0.93
TRAF3-205ENST00000558700 DEFB103AP81534 67 aa9.23□□□□□ -0.93
TRAF3-205ENST00000558700 ZNF200P98182 395 aaPredicted RBP9.23□□□□□ -0.93
TRAF3-205ENST00000558700 TAP1Q03518 808 aa9.23□□□□□ -0.93
TRAF3-205ENST00000558700 MTMR1Q13613 665 aa9.23□□□□□ -0.93
TRAF3-205ENST00000558700 COL9A3Q14050 684 aaPredicted RBP9.23□□□□□ -0.93
TRAF3-205ENST00000558700 UBE2SQ16763 222 aa9.23□□□□□ -0.93
TRAF3-205ENST00000558700 RTN1Q16799 776 aa9.23□□□□□ -0.93
TRAF3-205ENST00000558700 TRAF7Q6Q0C0 670 aa9.23□□□□□ -0.93
TRAF3-205ENST00000558700 CMTR1Q8N1G2 835 aaKnown RBP9.23□□□□□ -0.93
TRAF3-205ENST00000558700 PBXIP1Q96AQ6 731 aa9.23□□□□□ -0.93
TRAF3-205ENST00000558700 A0A0C4DFX4 3053 aa9.23□□□□□ -0.93
TRAF3-205ENST00000558700 NLRC5Q86WI3 1866 aa9.23□□□□□ -0.93
TRAF3-205ENST00000558700 RALGAPA2Q2PPJ7 1873 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 hCG_1642624A0A1W2PR95 340 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 TREHO43280 583 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 GJB5O95377 273 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 AMHP03971 560 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 KCNA2P16389 499 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 TCF7P36402 384 aaPredicted RBP9.22□□□□□ -0.93
TRAF3-205ENST00000558700 ADCY7P51828 1080 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 MRPS5P82675 430 aaKnown RBP9.22□□□□□ -0.93
TRAF3-205ENST00000558700 FGD1P98174 961 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 AP3B2Q13367 1082 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 MBTPS1Q14703 1052 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 GPNMBQ14956 572 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 CCDC85BQ15834 202 aaPredicted RBP9.22□□□□□ -0.93
TRAF3-205ENST00000558700 UTP14CQ5TAP6 766 aaKnown RBP9.22□□□□□ -0.93
TRAF3-205ENST00000558700 WWC2Q6AWC2 1192 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 DHX32Q7L7V1 743 aaKnown RBP9.22□□□□□ -0.93
TRAF3-205ENST00000558700 LMBR1Q8WVP7 490 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 ARNTL2Q8WYA1 636 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 SEPT8Q92599 483 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 ANO3Q9BYT9 981 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 GLT8D2Q9H1C3 349 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 CERS4Q9HA82 394 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 PRDM6Q9NQX0 595 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 UBIAD1Q9Y5Z9 338 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 NRCAMQ92823 1304 aa9.22□□□□□ -0.93
TRAF3-205ENST00000558700 TRANK1O15050 2925 aa9.21□□□□□ -0.93
TRAF3-205ENST00000558700 KLF18A0A0U1RQI7 1052 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 MAFGO15525 162 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 HOXA2O43364 376 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 ARHGEF15O94989 841 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 FOSP01100 380 aaPredicted RBP9.21□□□□□ -0.94
TRAF3-205ENST00000558700 RPLP2P05387 115 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms