RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 KIF28PB7ZC32 967 aa17.63■□□□□ 0.41
CSHL1-208ENST00000558609 DHX15O43143 795 aaKnown RBP17.63■□□□□ 0.41
CSHL1-208ENST00000558609 EIF5BO60841 1220 aaKnown RBP17.63■□□□□ 0.41
CSHL1-208ENST00000558609 MARK3P27448 753 aa17.63■□□□□ 0.41
CSHL1-208ENST00000558609 CIITAP33076 1130 aa17.63■□□□□ 0.41
CSHL1-208ENST00000558609 PLEKHG4Q58EX7 1191 aa17.63■□□□□ 0.41
CSHL1-208ENST00000558609 PPP2R2DQ66LE6 453 aa17.63■□□□□ 0.41
CSHL1-208ENST00000558609 TAF2Q6P1X5 1199 aa17.63■□□□□ 0.41
CSHL1-208ENST00000558609 CPLX2Q6PUV4 134 aaKnown RBP17.63■□□□□ 0.41
CSHL1-208ENST00000558609 PLPPR4Q7Z2D5 763 aa17.63■□□□□ 0.41
CSHL1-208ENST00000558609 SYMPKQ92797 1274 aaKnown RBP17.63■□□□□ 0.41
CSHL1-208ENST00000558609 IL17RAQ96F46 866 aa17.63■□□□□ 0.41
CSHL1-208ENST00000558609 IGKV6D-21A0A0A0MT36 114 aa17.62■□□□□ 0.41
CSHL1-208ENST00000558609 RRN3P2A6NIE6 340 aa17.62■□□□□ 0.41
CSHL1-208ENST00000558609 IPO5O00410 1097 aaKnown RBP17.62■□□□□ 0.41
CSHL1-208ENST00000558609 DEXIO95424 95 aa17.62■□□□□ 0.41
CSHL1-208ENST00000558609 STAT5BP51692 787 aa17.62■□□□□ 0.41
CSHL1-208ENST00000558609 SETQ01105 290 aaPredicted RBP17.62■□□□□ 0.41
CSHL1-208ENST00000558609 STK3Q13188 491 aa17.62■□□□□ 0.41
CSHL1-208ENST00000558609 GRIK4Q16099 956 aa17.62■□□□□ 0.41
CSHL1-208ENST00000558609 MARCH8Q5T0T0 291 aa17.62■□□□□ 0.41
CSHL1-208ENST00000558609 FAM177A1Q8N128 213 aaPredicted RBP17.62■□□□□ 0.41
CSHL1-208ENST00000558609 DBF4BQ8NFT6 615 aa17.62■□□□□ 0.41
CSHL1-208ENST00000558609 RASGRP4Q8TDF6 673 aa17.62■□□□□ 0.41
CSHL1-208ENST00000558609 TNPO1Q92973 898 aaKnown RBP17.62■□□□□ 0.41
CSHL1-208ENST00000558609 GAS2L1Q99501 681 aaPredicted RBP17.62■□□□□ 0.41
CSHL1-208ENST00000558609 CCNE2O96020 404 aa17.61■□□□□ 0.41
CSHL1-208ENST00000558609 CA3P07451 260 aa17.61■□□□□ 0.41
CSHL1-208ENST00000558609 INSRRP14616 1297 aa17.61■□□□□ 0.41
CSHL1-208ENST00000558609 NLRP5P59047 1200 aa17.61■□□□□ 0.41
CSHL1-208ENST00000558609 DEFB103AP81534 67 aa17.61■□□□□ 0.41
CSHL1-208ENST00000558609 MKRN4PQ13434 485 aaPredicted RBP17.61■□□□□ 0.41
CSHL1-208ENST00000558609 TJAP1Q5JTD0 557 aa17.61■□□□□ 0.41
CSHL1-208ENST00000558609 ABHD15Q6UXT9 468 aa17.61■□□□□ 0.41
CSHL1-208ENST00000558609 RUFY4Q6ZNE9 571 aa17.61■□□□□ 0.41
CSHL1-208ENST00000558609 ZNF577Q9BSK1 485 aa17.61■□□□□ 0.41
CSHL1-208ENST00000558609 TBC1D22BQ9NU19 505 aa17.61■□□□□ 0.41
CSHL1-208ENST00000558609 CHD7Q9P2D1 2997 aa17.61■□□□□ 0.41
CSHL1-208ENST00000558609 TUBE1Q9UJT0 475 aa17.61■□□□□ 0.41
CSHL1-208ENST00000558609 EDIL3O43854 480 aa17.6■□□□□ 0.41
CSHL1-208ENST00000558609 TLL1O43897 1013 aa17.6■□□□□ 0.41
CSHL1-208ENST00000558609 CTSHP09668 335 aa17.6■□□□□ 0.41
CSHL1-208ENST00000558609 SLC26A2P50443 739 aa17.6■□□□□ 0.41
CSHL1-208ENST00000558609 USP11P51784 963 aa17.6■□□□□ 0.41
CSHL1-208ENST00000558609 SCRN1Q12765 414 aa17.6■□□□□ 0.41
CSHL1-208ENST00000558609 PLCB4Q15147 1175 aa17.6■□□□□ 0.41
CSHL1-208ENST00000558609 RSPH3Q86UC2 560 aa17.6■□□□□ 0.41
CSHL1-208ENST00000558609 SEPT8Q92599 483 aa17.6■□□□□ 0.41
CSHL1-208ENST00000558609 OSBPL7Q9BZF2 842 aa17.6■□□□□ 0.41
CSHL1-208ENST00000558609 SLKQ9H2G2 1235 aaPredicted RBP17.6■□□□□ 0.41
CSHL1-208ENST00000558609 TPCN1Q9ULQ1 816 aa17.6■□□□□ 0.41
CSHL1-208ENST00000558609 PCDHA4Q9UN74 947 aa17.6■□□□□ 0.41
CSHL1-208ENST00000558609 PTPRSQ13332 1948 aa17.6■□□□□ 0.41
CSHL1-208ENST00000558609 DDX39AO00148 427 aaKnown RBP17.59■□□□□ 0.41
CSHL1-208ENST00000558609 PFKFB2O60825 505 aa17.59■□□□□ 0.41
CSHL1-208ENST00000558609 CDKL5O76039 1030 aa17.59■□□□□ 0.41
CSHL1-208ENST00000558609 GJB5O95377 273 aa17.59■□□□□ 0.41
CSHL1-208ENST00000558609 CHRNA1P02708 482 aa17.59■□□□□ 0.41
CSHL1-208ENST00000558609 RPLP2P05387 115 aaKnown RBP17.59■□□□□ 0.41
CSHL1-208ENST00000558609 ADGRE1Q14246 886 aa17.59■□□□□ 0.41
CSHL1-208ENST00000558609 ANKRD1Q15327 319 aa17.59■□□□□ 0.41
CSHL1-208ENST00000558609 PRR16Q569H4 304 aa17.59■□□□□ 0.41
CSHL1-208ENST00000558609 FAM160B1Q5W0V3 765 aa17.59■□□□□ 0.41
CSHL1-208ENST00000558609 GALNT17Q6IS24 598 aa17.59■□□□□ 0.41
CSHL1-208ENST00000558609 ZNF746Q6NUN9 644 aaPredicted RBP17.59■□□□□ 0.41
CSHL1-208ENST00000558609 MIS18BP1Q6P0N0 1132 aa17.59■□□□□ 0.41
CSHL1-208ENST00000558609 DAGLBQ8NCG7 672 aa17.59■□□□□ 0.41
CSHL1-208ENST00000558609 LENG9Q96B70 501 aa17.59■□□□□ 0.41
CSHL1-208ENST00000558609 ZBED2Q9BTP6 218 aa17.59■□□□□ 0.41
CSHL1-208ENST00000558609 C22orf23Q9BZE7 217 aa17.59■□□□□ 0.41
CSHL1-208ENST00000558609 TRPC6Q9Y210 931 aa17.59■□□□□ 0.41
CSHL1-208ENST00000558609 POTEB3A0JP26 581 aa17.58■□□□□ 0.4
CSHL1-208ENST00000558609 RBAK-RBAKDNI3L0D1 243 aa17.58■□□□□ 0.4
CSHL1-208ENST00000558609 M0R2N6 131 aa17.58■□□□□ 0.4
CSHL1-208ENST00000558609 TNFRSF10AO00220 468 aa17.58■□□□□ 0.4
CSHL1-208ENST00000558609 BACH1O14867 736 aa17.58■□□□□ 0.4
CSHL1-208ENST00000558609 COL9A1P20849 921 aa17.58■□□□□ 0.4
CSHL1-208ENST00000558609 IGBP1P78318 339 aa17.58■□□□□ 0.4
CSHL1-208ENST00000558609 TAP1Q03518 808 aa17.58■□□□□ 0.4
CSHL1-208ENST00000558609 MGAT3Q09327 533 aa17.58■□□□□ 0.4
CSHL1-208ENST00000558609 POTEBQ6S5H4 581 aa17.58■□□□□ 0.4
CSHL1-208ENST00000558609 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.58■□□□□ 0.4
CSHL1-208ENST00000558609 TMCO2Q7Z6W1 182 aaPredicted RBP17.58■□□□□ 0.4
CSHL1-208ENST00000558609 BLIDQ8IZY5 108 aa17.58■□□□□ 0.4
CSHL1-208ENST00000558609 DNAJB3Q8WWF6 145 aa17.58■□□□□ 0.4
CSHL1-208ENST00000558609 AIFM3Q96NN9 605 aa17.58■□□□□ 0.4
CSHL1-208ENST00000558609 RAD9AQ99638 391 aa17.58■□□□□ 0.4
CSHL1-208ENST00000558609 RAPGEFL1Q9UHV5 662 aa17.58■□□□□ 0.4
CSHL1-208ENST00000558609 PCDHA2Q9Y5H9 948 aa17.58■□□□□ 0.4
CSHL1-208ENST00000558609 HBP1O60381 514 aa17.57■□□□□ 0.4
CSHL1-208ENST00000558609 ARHGEF15O94989 841 aa17.57■□□□□ 0.4
CSHL1-208ENST00000558609 AMHP03971 560 aa17.57■□□□□ 0.4
CSHL1-208ENST00000558609 AK2P54819 239 aa17.57■□□□□ 0.4
CSHL1-208ENST00000558609 KRT76Q01546 638 aa17.57■□□□□ 0.4
CSHL1-208ENST00000558609 NPY5RQ15761 445 aa17.57■□□□□ 0.4
CSHL1-208ENST00000558609 SWSAP1Q6NVH7 229 aa17.57■□□□□ 0.4
CSHL1-208ENST00000558609 CCDC60Q8IWA6 550 aaPredicted RBP17.57■□□□□ 0.4
CSHL1-208ENST00000558609 SMAP1Q8IYB5 467 aaPredicted RBP17.57■□□□□ 0.4
CSHL1-208ENST00000558609 APBB2Q92870 758 aa17.57■□□□□ 0.4
CSHL1-208ENST00000558609 UIMC1Q96RL1 719 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms