RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 EHMT1Q9H9B1 1298 aa7.88□□□□□ -1.15
LRRC28-207ENST00000558500 TOMM22Q9NS69 142 aa7.88□□□□□ -1.15
LRRC28-207ENST00000558500 DDX19BQ9UMR2 479 aa7.88□□□□□ -1.15
LRRC28-207ENST00000558500 MRPL11Q9Y3B7 192 aaKnown RBP7.88□□□□□ -1.15
LRRC28-207ENST00000558500 PCDHGC5Q9Y5F6 944 aa7.88□□□□□ -1.15
LRRC28-207ENST00000558500 CCDC171Q6TFL3 1326 aa7.87□□□□□ -1.15
LRRC28-207ENST00000558500 CFBP00751 764 aa7.87□□□□□ -1.15
LRRC28-207ENST00000558500 CHRNA1P02708 482 aa7.87□□□□□ -1.15
LRRC28-207ENST00000558500 TGFB3P10600 412 aa7.87□□□□□ -1.15
LRRC28-207ENST00000558500 MS4A1P11836 297 aa7.87□□□□□ -1.15
LRRC28-207ENST00000558500 MYCLP12524 364 aaPredicted RBP7.87□□□□□ -1.15
LRRC28-207ENST00000558500 RBM10P98175 930 aaKnown RBP7.87□□□□□ -1.15
LRRC28-207ENST00000558500 LPIN1Q14693 890 aa7.87□□□□□ -1.15
LRRC28-207ENST00000558500 QRICH1Q2TAL8 776 aa7.87□□□□□ -1.15
LRRC28-207ENST00000558500 RRP12Q5JTH9 1297 aaKnown RBP7.87□□□□□ -1.15
LRRC28-207ENST00000558500 VSIG10LQ86VR7 867 aa7.87□□□□□ -1.15
LRRC28-207ENST00000558500 UBALD2Q8IYN6 164 aa7.87□□□□□ -1.15
LRRC28-207ENST00000558500 CRIPAKQ8N1N5 446 aa7.87□□□□□ -1.15
LRRC28-207ENST00000558500 KREMEN2Q8NCW0 462 aa7.87□□□□□ -1.15
LRRC28-207ENST00000558500 TTC14Q96N46 770 aa7.87□□□□□ -1.15
LRRC28-207ENST00000558500 CDCA3Q99618 268 aaPredicted RBP7.87□□□□□ -1.15
LRRC28-207ENST00000558500 USP26Q9BXU7 913 aa7.87□□□□□ -1.15
LRRC28-207ENST00000558500 S1PR5Q9H228 398 aa7.87□□□□□ -1.15
LRRC28-207ENST00000558500 MLXIPQ9HAP2 919 aa7.87□□□□□ -1.15
LRRC28-207ENST00000558500 SORCS3Q9UPU3 1222 aa7.87□□□□□ -1.15
LRRC28-207ENST00000558500 SUPT16HQ9Y5B9 1047 aaKnown RBP7.87□□□□□ -1.15
LRRC28-207ENST00000558500 TPRP12270 2363 aaKnown RBP7.86□□□□□ -1.15
LRRC28-207ENST00000558500 ACACBO00763 2458 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 PLXNA3P51805 1871 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 KMT2BQ9UMN6 2715 aaPredicted RBP7.86□□□□□ -1.15
LRRC28-207ENST00000558500 FSD2A1L4K1 749 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 OPLAHO14841 1288 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 PER2O15055 1255 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 KRT37O76014 449 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 BRD1O95696 1058 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 HSD17B4P51659 736 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 ARHGAP4P98171 946 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 GHRHRQ02643 423 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 MGAT3Q09327 533 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 MTMR3Q13615 1198 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 ALX1Q15699 326 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 DUSP6Q16828 381 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 FBXO47Q5MNV8 452 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 VPS53Q5VIR6 699 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 STOX1Q6ZVD7 989 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 ADGRF4Q8IZF3 695 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 MICAL1Q8TDZ2 1067 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 LMBR1Q8WVP7 490 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 LINC01599Q8WXQ3 324 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 GPKOWQ92917 476 aaPredicted RBP eCLIP7.86□□□□□ -1.15
LRRC28-207ENST00000558500 RMDN1Q96DB5 314 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 NEK1Q96PY6 1258 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 BCAS3Q9H6U6 928 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 DCHS1Q96JQ0 3298 aa7.86□□□□□ -1.15
LRRC28-207ENST00000558500 NRCAMQ92823 1304 aa7.85□□□□□ -1.15
LRRC28-207ENST00000558500 NOP56O00567 594 aaKnown RBP7.85□□□□□ -1.15
LRRC28-207ENST00000558500 PPFIA3O75145 1194 aa7.85□□□□□ -1.15
LRRC28-207ENST00000558500 HOXB3P14651 431 aaPredicted RBP7.85□□□□□ -1.15
LRRC28-207ENST00000558500 SP100P23497 879 aaPredicted RBP7.85□□□□□ -1.15
LRRC28-207ENST00000558500 MLLT3P42568 568 aaPredicted RBP7.85□□□□□ -1.15
LRRC28-207ENST00000558500 UBE3AQ05086 875 aa7.85□□□□□ -1.15
LRRC28-207ENST00000558500 KCNC3Q14003 757 aa7.85□□□□□ -1.15
LRRC28-207ENST00000558500 PGM5Q15124 567 aa7.85□□□□□ -1.15
LRRC28-207ENST00000558500 PAN2Q504Q3 1202 aaKnown RBP7.85□□□□□ -1.15
LRRC28-207ENST00000558500 ANKRD54Q6NXT1 300 aa7.85□□□□□ -1.15
LRRC28-207ENST00000558500 TAF2Q6P1X5 1199 aa7.85□□□□□ -1.15
LRRC28-207ENST00000558500 TMEM184AQ6ZMB5 413 aa7.85□□□□□ -1.15
LRRC28-207ENST00000558500 RUFY4Q6ZNE9 571 aa7.85□□□□□ -1.15
LRRC28-207ENST00000558500 TSHZ1Q6ZSZ6 1077 aa7.85□□□□□ -1.15
LRRC28-207ENST00000558500 DGLUCYQ7Z3D6 616 aa7.85□□□□□ -1.15
LRRC28-207ENST00000558500 RTN4RL1Q86UN2 441 aaPredicted RBP7.85□□□□□ -1.15
LRRC28-207ENST00000558500 TRIM50Q86XT4 487 aa7.85□□□□□ -1.15
LRRC28-207ENST00000558500 NPAS4Q8IUM7 802 aa7.85□□□□□ -1.15
LRRC28-207ENST00000558500 IL31RAQ8NI17 732 aa7.85□□□□□ -1.15
LRRC28-207ENST00000558500 GPR20Q99678 358 aa7.85□□□□□ -1.15
LRRC28-207ENST00000558500 CHMP4BQ9H444 224 aaKnown RBP7.85□□□□□ -1.15
LRRC28-207ENST00000558500 JMJD4Q9H9V9 463 aa7.85□□□□□ -1.15
LRRC28-207ENST00000558500 MAP3K20Q9NYL2 800 aaKnown RBP7.85□□□□□ -1.15
LRRC28-207ENST00000558500 ZNF215Q9UL58 517 aaPredicted RBP7.85□□□□□ -1.15
LRRC28-207ENST00000558500 NR2E1Q9Y466 385 aa7.85□□□□□ -1.15
LRRC28-207ENST00000558500 CACNA1GO43497 2377 aa7.85□□□□□ -1.15
LRRC28-207ENST00000558500 RALGAPA2Q2PPJ7 1873 aa7.85□□□□□ -1.15
LRRC28-207ENST00000558500 TTC41PQ6P2S7 1318 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 MYH7P12883 1935 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 CCER2I3L3R5 266 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 FSCN2O14926 492 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 FGAP02671 866 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 STAG3L1P0CL83 205 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 SRGAP2BP0DMP2 458 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 CCND2P30279 289 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 HOXA13P31271 388 aaPredicted RBP7.84□□□□□ -1.15
LRRC28-207ENST00000558500 CD52P31358 61 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 TECP42680 631 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 GATMP50440 423 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 CLCN5P51795 746 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 ERVFC1P60507 584 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 FOXK1P85037 733 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 NEDD9Q14511 834 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 PPP1R15BQ5SWA1 713 aa7.84□□□□□ -1.15
LRRC28-207ENST00000558500 LCE2DQ5TA82 110 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms