RNA–Protein interactions for RNA: ENST00000558429.1

AC009269.3-201, humanhuman

TSL 5 BASIC

Gene AC009269.3, Length 472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009269.3-201ENST00000558429 LMF1Q96S06 567 aa5.56□□□□□ -1.52
AC009269.3-201ENST00000558429 CDC6Q99741 560 aa5.56□□□□□ -1.52
AC009269.3-201ENST00000558429 SRPK3Q9UPE1 567 aa5.56□□□□□ -1.52
AC009269.3-201ENST00000558429 ZNF888P0CJ79 500 aaPredicted RBP5.55□□□□□ -1.52
AC009269.3-201ENST00000558429 SSRP1Q08945 709 aaKnown RBP5.55□□□□□ -1.52
AC009269.3-201ENST00000558429 DBPQ10586 325 aaPredicted RBP5.55□□□□□ -1.52
AC009269.3-201ENST00000558429 USP10Q14694 798 aaKnown RBP5.55□□□□□ -1.52
AC009269.3-201ENST00000558429 GPR19Q15760 415 aa5.55□□□□□ -1.52
AC009269.3-201ENST00000558429 ARHGAP36Q6ZRI8 547 aa5.55□□□□□ -1.52
AC009269.3-201ENST00000558429 SCUBE1Q8IWY4 988 aa5.55□□□□□ -1.52
AC009269.3-201ENST00000558429 NLGN4XQ8N0W4 816 aa5.55□□□□□ -1.52
AC009269.3-201ENST00000558429 Q8TCH9 128 aa5.55□□□□□ -1.52
AC009269.3-201ENST00000558429 KATNBL1Q9H079 304 aa5.55□□□□□ -1.52
AC009269.3-201ENST00000558429 VPS11Q9H270 941 aa5.55□□□□□ -1.52
AC009269.3-201ENST00000558429 SEMA4AQ9H3S1 761 aa5.55□□□□□ -1.52
AC009269.3-201ENST00000558429 RIC8BQ9NVN3 520 aa5.55□□□□□ -1.52
AC009269.3-201ENST00000558429 ARHGAP28Q9P2N2 729 aa5.55□□□□□ -1.52
AC009269.3-201ENST00000558429 PFDN2Q9UHV9 154 aa5.55□□□□□ -1.52
AC009269.3-201ENST00000558429 PTPN22Q9Y2R2 807 aa5.55□□□□□ -1.52
AC009269.3-201ENST00000558429 MSRB2Q9Y3D2 182 aa5.55□□□□□ -1.52
AC009269.3-201ENST00000558429 TRBV23-1A0A0A0MS06 115 aa5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 CCDC85CA6NKD9 419 aa5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 ADCY3O60266 1144 aa5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 PTPN1P18031 435 aaKnown RBP5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 GDF5P43026 501 aa5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 SUMO1P63165 101 aaKnown RBP5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 RASGRF1Q13972 1273 aa5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 R3HDM1Q15032 1099 aaKnown RBP5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 HS1BP3Q53T59 392 aa5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 SPDYAQ5MJ70 313 aa5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 CRIP3Q6Q6R5 217 aa5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 Q8N1X5 172 aa5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 GIMAP8Q8ND71 665 aaPredicted RBP5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 PTPRN2Q92932 1015 aa5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 FBXW5Q969U6 566 aa5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 IPO9Q96P70 1041 aaKnown RBP5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 CARD11Q9BXL7 1154 aa5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 SCAND2PQ9GZW5 306 aaPredicted RBP5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 CATSPERZQ9NTU4 200 aa5.54□□□□□ -1.52
AC009269.3-201ENST00000558429 ESYT3A0FGR9 886 aa5.53□□□□□ -1.52
AC009269.3-201ENST00000558429 FAM90A27PA6NNH2 459 aa5.53□□□□□ -1.52
AC009269.3-201ENST00000558429 MAN2B1O00754 1011 aa5.53□□□□□ -1.52
AC009269.3-201ENST00000558429 WNT9AO14904 365 aa5.53□□□□□ -1.52
AC009269.3-201ENST00000558429 FOXS1O43638 330 aa5.53□□□□□ -1.52
AC009269.3-201ENST00000558429 POLD1P28340 1107 aa5.53□□□□□ -1.52
AC009269.3-201ENST00000558429 GUCY1A3Q02108 690 aa5.53□□□□□ -1.52
AC009269.3-201ENST00000558429 FIGNQ5HY92 759 aa5.53□□□□□ -1.52
AC009269.3-201ENST00000558429 FAM209AQ5JX71 171 aa5.53□□□□□ -1.52
AC009269.3-201ENST00000558429 TCTN3Q6NUS6 607 aa5.53□□□□□ -1.52
AC009269.3-201ENST00000558429 DPP8Q6V1X1 898 aaPredicted RBP5.53□□□□□ -1.52
AC009269.3-201ENST00000558429 EP400NLQ6ZTU2 488 aa5.53□□□□□ -1.52
AC009269.3-201ENST00000558429 PTRH1Q86Y79 214 aaKnown RBP5.53□□□□□ -1.52
AC009269.3-201ENST00000558429 ZNF747Q9BV97 191 aa5.53□□□□□ -1.52
AC009269.3-201ENST00000558429 IGSF5Q9NSI5 407 aa5.53□□□□□ -1.52
AC009269.3-201ENST00000558429 PPP1R1BQ9UD71 204 aaPredicted RBP5.53□□□□□ -1.52
AC009269.3-201ENST00000558429 PCDHA8Q9Y5H6 950 aa5.53□□□□□ -1.52
AC009269.3-201ENST00000558429 ATP23Q9Y6H3 246 aa5.53□□□□□ -1.52
AC009269.3-201ENST00000558429 CUTAO60888 179 aa5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 AMHP03971 560 aa5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 AMY2AP04746 511 aa5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 C6orf222P0C671 652 aaPredicted RBP5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 SRGAP2CP0DJJ0 459 aa5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 PYGMP11217 842 aa5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 PDE6AP16499 860 aa5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 NAT1P18440 290 aa5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 KRT15P19012 456 aa5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 AMY2BP19961 511 aa5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 GJA4P35212 333 aa5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 RAC3P60763 192 aa5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 ZC3H6P61129 1189 aaKnown RBP5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 ST5P78524 1137 aa5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 TOP3AQ13472 1001 aaPredicted RBP5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 WDR72Q3MJ13 1102 aa5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 NAALADL2Q58DX5 795 aa5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 FOXB2Q5VYV0 432 aa5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 ZBTB38Q8NAP3 1195 aaPredicted RBP5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 PCDH19Q8TAB3 1148 aa5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 NEIL1Q96FI4 390 aaPredicted RBP5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 CCDC113Q9H0I3 377 aa5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 CBLCQ9ULV8 474 aa5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 ZFR2Q9UPR6 939 aaKnown RBP5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 TESMINQ9Y4I5 508 aa5.52□□□□□ -1.53
AC009269.3-201ENST00000558429 PRAMEF25A6NGN4 478 aa5.51□□□□□ -1.53
AC009269.3-201ENST00000558429 ARVCFO00192 962 aa5.51□□□□□ -1.53
AC009269.3-201ENST00000558429 DIAPH1O60610 1272 aaKnown RBP5.51□□□□□ -1.53
AC009269.3-201ENST00000558429 RRADP55042 308 aa5.51□□□□□ -1.53
AC009269.3-201ENST00000558429 JAM2P57087 298 aa5.51□□□□□ -1.53
AC009269.3-201ENST00000558429 C16orf59Q7L2K0 433 aa5.51□□□□□ -1.53
AC009269.3-201ENST00000558429 TAX1BP1Q86VP1 789 aa5.51□□□□□ -1.53
AC009269.3-201ENST00000558429 OSTM1Q86WC4 334 aa5.51□□□□□ -1.53
AC009269.3-201ENST00000558429 SORCS2Q96PQ0 1159 aa5.51□□□□□ -1.53
AC009269.3-201ENST00000558429 ZNF561-AS1K7EIQ3 104 aa5.5□□□□□ -1.53
AC009269.3-201ENST00000558429 GSTA4O15217 222 aa5.5□□□□□ -1.53
AC009269.3-201ENST00000558429 FZD7O75084 574 aa5.5□□□□□ -1.53
AC009269.3-201ENST00000558429 PTGS1P23219 599 aa5.5□□□□□ -1.53
AC009269.3-201ENST00000558429 AOAHP28039 575 aa5.5□□□□□ -1.53
AC009269.3-201ENST00000558429 ETV4P43268 484 aa5.5□□□□□ -1.53
AC009269.3-201ENST00000558429 GABREP78334 506 aa5.5□□□□□ -1.53
AC009269.3-201ENST00000558429 PRKD1Q15139 912 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms