RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 ZNF746Q6NUN9 644 aaPredicted RBP9.61□□□□□ -0.87
TPM1-213ENST00000558400 MIS18BP1Q6P0N0 1132 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 SMAP1Q8IYB5 467 aaPredicted RBP9.61□□□□□ -0.87
TPM1-213ENST00000558400 RASGRP4Q8TDF6 673 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 ATP6V0A1Q93050 837 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 FAM161BQ96MY7 647 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 AIFM3Q96NN9 605 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 PKD2L1Q9P0L9 805 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 KCNJ14Q9UNX9 436 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 KIF3AQ9Y496 699 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 GTF3C3Q9Y5Q9 886 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 SCN10AQ9Y5Y9 1956 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 EMSYQ7Z589 1322 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.6□□□□□ -0.87
TPM1-213ENST00000558400 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.6□□□□□ -0.87
TPM1-213ENST00000558400 TNFRSF10AO00220 468 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 LARGE1O95461 756 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 PSAPP07602 524 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 ACTN1P12814 892 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 SELPP16109 830 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 HOXC8P31273 242 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 SFNP31947 248 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 KRT2P35908 639 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 ITGB3BPQ13352 177 aaPredicted RBP9.6□□□□□ -0.87
TPM1-213ENST00000558400 NPY5RQ15761 445 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 TMEM240Q5SV17 173 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 TAF2Q6P1X5 1199 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 ABHD15Q6UXT9 468 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 NEK8Q86SG6 692 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 RSPH3Q86UC2 560 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 SERINC5Q86VE9 423 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 FAM184AQ8NB25 1140 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 RNPC3Q96LT9 517 aaKnown RBP9.6□□□□□ -0.87
TPM1-213ENST00000558400 FAM20AQ96MK3 541 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 TBC1D32Q96NH3 1257 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 PCDHA10Q9Y5I2 948 aa9.6□□□□□ -0.87
TPM1-213ENST00000558400 MYH7BA7E2Y1 1941 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 IGKV6D-21A0A0A0MT36 114 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 BACH1O14867 736 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 ADAMTS3O15072 1205 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 TBX3O15119 743 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 HBP1O60381 514 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 GAS7O60861 476 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 BAG4O95429 457 aaKnown RBP9.59□□□□□ -0.87
TPM1-213ENST00000558400 MMP1P03956 469 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 CKBP12277 381 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 ADAM17P78536 824 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 SMAD3P84022 425 aaKnown RBP9.59□□□□□ -0.87
TPM1-213ENST00000558400 PPFIA1Q13136 1202 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 INF2Q27J81 1249 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 FAM43BQ6ZT52 329 aaPredicted RBP9.59□□□□□ -0.87
TPM1-213ENST00000558400 ZNF365Q70YC5 407 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 C16orf59Q7L2K0 433 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 RPAINQ86UA6 219 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 CCDC83Q8IWF9 413 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 RDM1Q8NG50 284 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 HERVK_113Q902F9 699 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 SLC5A5Q92911 643 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 LENG9Q96B70 501 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 C8orf76Q96K31 380 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 MBOAT7Q96N66 472 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 CDX2Q99626 313 aaPredicted RBP9.59□□□□□ -0.87
TPM1-213ENST00000558400 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.59□□□□□ -0.871e-6■□□□□ 10.6
TPM1-213ENST00000558400 TEKT3Q9BXF9 490 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 BACH2Q9BYV9 841 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 ZNF302Q9NR11 478 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 SETD4Q9NVD3 440 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 DDX25Q9UHL0 483 aaKnown RBP9.59□□□□□ -0.87
TPM1-213ENST00000558400 SAMM50Q9Y512 469 aa9.59□□□□□ -0.87
TPM1-213ENST00000558400 CDH23Q9H251 3354 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 TMEM265A0A087WTH1 108 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 POTEB3A0JP26 581 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 WDR64B1ANS9 1081 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 RSPH10B2B2RC85 870 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 DDX39AO00148 427 aaKnown RBP9.58□□□□□ -0.88
TPM1-213ENST00000558400 MSH4O15457 936 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 TREHO43280 583 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 EDIL3O43854 480 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 MARCH6O60337 910 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 JAK2O60674 1132 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 CCNE2O96020 404 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 RSPH10BP0C881 870 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 ACRP10323 421 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 INSRRP14616 1297 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 THPOP40225 353 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 JAK3P52333 1124 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 EPHB4P54760 987 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 ZNF200P98182 395 aaPredicted RBP9.58□□□□□ -0.88
TPM1-213ENST00000558400 GRIK4Q16099 956 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 LETM2Q2VYF4 491 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 TJAP1Q5JTD0 557 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 C9orf50Q5SZB4 431 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 LRCH2Q5VUJ6 765 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 KRT40Q6A162 431 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 SWSAP1Q6NVH7 229 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 PDXDC2PQ6P474 469 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 POTEBQ6S5H4 581 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 PIK3AP1Q6ZUJ8 805 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 LRRC8DQ7L1W4 858 aa9.58□□□□□ -0.88
TPM1-213ENST00000558400 TRIM50Q86XT4 487 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms