RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 CHRNA3P32297 505 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 ARHGDIAP52565 204 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 LRRC63Q05C16 580 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 SEMA3FQ13275 785 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 ADCK5Q3MIX3 580 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 ARMCX5Q6P1M9 558 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 ALKBH5Q6P6C2 394 aaKnown RBP12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 APOA5Q6Q788 366 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 TRIM50Q86XT4 487 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 TMOD4Q9NZQ9 345 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 G3BP2Q9UN86 482 aaKnown RBP12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 SNX24Q9Y343 169 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 BACH1O14867 736 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 STRNO43815 780 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 TAF5LO75529 589 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 KRT38O76015 456 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 HSPD1P10809 573 aaKnown RBP12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 PUM3Q15397 648 aaKnown RBP12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 WDR24Q96S15 920 aa12.64□□□□□ -0.39
CSPG4P12-201ENST00000558282 GOLGA8CPA6NN73 597 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 C16orf96A6NNT2 1141 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 PALMO75781 387 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 DDAH1O94760 285 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 PMS1P54277 932 aaKnown RBP12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 ACAD11Q709F0 780 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 HORMAD1Q86X24 394 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 SLFN12Q8IYM2 578 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 FBXL13Q8NEE6 735 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 CATSPER2Q96P56 530 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 RNF26Q9BY78 433 aaPredicted RBP12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 PKD2L2Q9NZM6 624 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 H0YCG3 227 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 HSPA13P48723 471 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 CYP2J2P51589 502 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 EPHB1P54762 984 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 MRPL28Q13084 256 aaKnown RBP12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 PCGF5Q86SE9 256 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 CARD9Q9H257 536 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 ZBTB21Q9ULJ3 1066 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 ACEP12821 1306 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 MED23Q9ULK4 1368 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 CFAP69A5D8W1 941 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 SUPT3HO75486 399 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 DHX34Q14147 1143 aaKnown RBP12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 TMEM259Q4ZIN3 620 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 KAZNQ674X7 775 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 NYAP1Q6ZVC0 841 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 RAPH1Q70E73 1250 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 FAM133AQ8N9E0 248 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 TTC17Q96AE7 1141 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 OPTNQ96CV9 577 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 ZNF277Q9NRM2 450 aaPredicted RBP12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 FBXL5Q9UKA1 691 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 LDHBP07195 334 aaKnown RBP12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 PCP11498 1178 aaKnown RBP12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 TPP2P29144 1249 aaPredicted RBP12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 MYL7Q01449 175 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 CADPS2Q86UW7 1296 aa12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 SPDYE1Q8NFV5 336 aaPredicted RBP12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 SMG5Q9UPR3 1016 aaKnown RBP12.63□□□□□ -0.39
CSPG4P12-201ENST00000558282 KRR1Q13601 381 aaKnown RBP12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 KLC3Q6P597 504 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 OR9Q1Q8NGQ5 310 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 SNRNP27Q8WVK2 155 aaKnown RBP12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 STRIP2Q9ULQ0 834 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 FHOD1Q9Y613 1164 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 MAGI3Q5TCQ9 1506 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 SMCO2A6NFE2 343 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 FMNL1O95466 1100 aaPredicted RBP12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 ANP32DO95626 131 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 HSPA4LO95757 839 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 TNNI1P19237 187 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 ARL4CP56559 192 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 TRIM16LQ309B1 348 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 FAM186BQ8IYM0 893 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 PPM1KQ8N3J5 372 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 POLE3Q9NRF9 147 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 GGPS1O95749 300 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 KRT14P02533 472 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 TECP42680 631 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 RESP18Q5W5W9 173 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 PITPNM2Q9BZ72 1349 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 PREX2Q70Z35 1606 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 KPNA7A9QM74 516 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 NR2F2P24468 414 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 PSMC2P35998 433 aaKnown RBP12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 POTEAQ6S8J7 498 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 KDM7AQ6ZMT4 941 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 CCDC117Q8IWD4 279 aaPredicted RBP12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 DHX40Q8IX18 779 aaKnown RBP12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 ZNF579Q8NAF0 562 aaKnown RBP12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 PSPC1Q8WXF1 523 aaKnown RBP12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 BTBD6Q96KE9 485 aa12.62□□□□□ -0.39
CSPG4P12-201ENST00000558282 A0A087WWV3 80 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 CTDSPL2Q05D32 466 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 PTPN21Q16825 1174 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 ZCWPW2Q504Y3 356 aa12.61□□□□□ -0.39
CSPG4P12-201ENST00000558282 TTBK2Q6IQ55 1244 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms