RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 NEMFO60524 1076 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 CCNE2O96020 404 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 ACRP10323 421 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 ITGB8P26012 769 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 SFNP31947 248 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 MCM7P33993 719 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 BMP8BP34820 402 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 THPOP40225 353 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 PTK7Q13308 1070 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 GRIK4Q16099 956 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 EARS2Q5JPH6 523 aaKnown RBP10.13□□□□□ -0.79
SPG11-207ENST00000558138 HABP4Q5JVS0 413 aaKnown RBP10.13□□□□□ -0.79
SPG11-207ENST00000558138 NCAPH2Q6IBW4 605 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 PSRC1Q6PGN9 363 aaPredicted RBP10.13□□□□□ -0.79
SPG11-207ENST00000558138 POTEBQ6S5H4 581 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 RSPH3Q86UC2 560 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 POTEDQ86YR6 584 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 RPUSD2Q8IZ73 545 aaKnown RBP10.13□□□□□ -0.79
SPG11-207ENST00000558138 FBXO18Q8NFZ0 1043 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 RIT2Q99578 217 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 FOXP1Q9H334 677 aaPredicted RBP10.13□□□□□ -0.79
SPG11-207ENST00000558138 UNC45AQ9H3U1 944 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 RNPEPQ9H4A4 650 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 DISC1Q9NRI5 854 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 DNAH12Q6ZR08 3092 aa10.13□□□□□ -0.79
SPG11-207ENST00000558138 KAT6AQ92794 2004 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 CEP290O15078 2479 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 CYP3A7-CYP3A51PA0A087WV96 503 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 VPS37CA5D8V6 355 aaPredicted RBP10.12□□□□□ -0.79
SPG11-207ENST00000558138 RRN3P2A6NIE6 340 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 K7ELQ4 463 aaPredicted RBP10.12□□□□□ -0.79
SPG11-207ENST00000558138 M0QZ92 97 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 PITPNM1O00562 1244 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 TREHO43280 583 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 LGR5O75473 907 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 CTSHP09668 335 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 ACTN1P12814 892 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 SELPP16109 830 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 CYP3A7P24462 503 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 SLC26A2P50443 739 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 PLCB4Q15147 1175 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 LARP1BQ659C4 914 aaKnown RBP10.12□□□□□ -0.79
SPG11-207ENST00000558138 PPP4R3AQ6IN85 833 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 ABHD15Q6UXT9 468 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 LRRC8DQ7L1W4 858 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 PLPPR4Q7Z2D5 763 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 NOSTRINQ8IVI9 506 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 CCDC60Q8IWA6 550 aaPredicted RBP10.12□□□□□ -0.79
SPG11-207ENST00000558138 SLFN12Q8IYM2 578 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 AFAP1L1Q8TED9 768 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 LMBR1Q8WVP7 490 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 SLC5A5Q92911 643 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 LENG9Q96B70 501 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 FAM20AQ96MK3 541 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 CCDC43Q96MW1 224 aaKnown RBP10.12□□□□□ -0.79
SPG11-207ENST00000558138 FAM49AQ9H0Q0 323 aaPredicted RBP10.12□□□□□ -0.79
SPG11-207ENST00000558138 WNT8AQ9H1J5 351 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 IL23AQ9NPF7 189 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 TUBE1Q9UJT0 475 aa10.12□□□□□ -0.79
SPG11-207ENST00000558138 A0A1W2PPC1 479 aa10.11□□□□□ -0.79
SPG11-207ENST00000558138 TBX3O15119 743 aa10.11□□□□□ -0.79
SPG11-207ENST00000558138 DHX15O43143 795 aaKnown RBP10.11□□□□□ -0.79
SPG11-207ENST00000558138 HBP1O60381 514 aa10.11□□□□□ -0.79
SPG11-207ENST00000558138 FGBP02675 491 aa10.11□□□□□ -0.79
SPG11-207ENST00000558138 CKBP12277 381 aa10.11□□□□□ -0.79
SPG11-207ENST00000558138 INSRRP14616 1297 aa10.11□□□□□ -0.79
SPG11-207ENST00000558138 RFC2P35250 354 aa10.11□□□□□ -0.79
SPG11-207ENST00000558138 TXKP42681 527 aa10.11□□□□□ -0.79
SPG11-207ENST00000558138 SHHQ15465 462 aa10.11□□□□□ -0.79
SPG11-207ENST00000558138 ZNF174Q15697 407 aa10.11□□□□□ -0.79
SPG11-207ENST00000558138 TMEM266Q2M3C6 531 aa10.11□□□□□ -0.79
SPG11-207ENST00000558138 TTC38Q5R3I4 469 aa10.11□□□□□ -0.79
SPG11-207ENST00000558138 OTOP2Q7RTS6 562 aa10.11□□□□□ -0.79
SPG11-207ENST00000558138 ETNPPLQ8TBG4 499 aa10.11□□□□□ -0.79
SPG11-207ENST00000558138 TNFRSF25Q93038 417 aa10.11□□□□□ -0.79
SPG11-207ENST00000558138 FAM167AQ96KS9 214 aa10.11□□□□□ -0.79
SPG11-207ENST00000558138 PCYT2Q99447 389 aa10.11□□□□□ -0.79
SPG11-207ENST00000558138 NRBP2Q9NSY0 501 aa10.11□□□□□ -0.79
SPG11-207ENST00000558138 SEPT9Q9UHD8 586 aaPredicted RBP10.11□□□□□ -0.79
SPG11-207ENST00000558138 CEP131Q9UPN4 1083 aa10.11□□□□□ -0.79
SPG11-207ENST00000558138 RSPH10B2B2RC85 870 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 DKC1O60832 514 aaKnown RBP eCLIP10.1□□□□□ -0.79
SPG11-207ENST00000558138 PSMD10O75832 226 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 ATG7O95352 703 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 PARNO95453 639 aaKnown RBP10.1□□□□□ -0.79
SPG11-207ENST00000558138 PFKMP08237 780 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 IQCF3P0C7M6 154 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 RSPH10BP0C881 870 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 PDCP20941 246 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 PRKCEQ02156 737 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 ZNF484Q5JVG2 852 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 C9orf50Q5SZB4 431 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 ZNF618Q5T7W0 954 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 TAF2Q6P1X5 1199 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 ZNF365Q70YC5 407 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 SERINC5Q86VE9 423 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 METTL13Q8N6R0 699 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 BANK1Q8NDB2 785 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 RDM1Q8NG50 284 aa10.1□□□□□ -0.79
SPG11-207ENST00000558138 ATP8B4Q8TF62 1192 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms