RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 PTGDRQ13258 359 aa28.77■■■□□ 2.2
SMAD6-202ENST00000557916 GABBR1Q9UBS5 961 aa28.77■■■□□ 2.2
SMAD6-202ENST00000557916 NR2E3Q9Y5X4 410 aa28.77■■■□□ 2.2
SMAD6-202ENST00000557916 TNRC18O15417 2968 aaPredicted RBP28.77■■■□□ 2.2
SMAD6-202ENST00000557916 EML1O00423 815 aa28.77■■■□□ 2.2
SMAD6-202ENST00000557916 SMIM10L2AP0DMW4 78 aa28.77■■■□□ 2.2
SMAD6-202ENST00000557916 SMIM10L2BP0DMW5 78 aa28.77■■■□□ 2.2
SMAD6-202ENST00000557916 SPIRE1Q08AE8 756 aa28.77■■■□□ 2.2
SMAD6-202ENST00000557916 PDXDC2PQ6P474 469 aa28.77■■■□□ 2.2
SMAD6-202ENST00000557916 TRPV6Q9H1D0 765 aa28.77■■■□□ 2.2
SMAD6-202ENST00000557916 GTF2IRD1Q9UHL9 959 aa28.77■■■□□ 2.2
SMAD6-202ENST00000557916 MAFBQ9Y5Q3 323 aaPredicted RBP28.77■■■□□ 2.2
SMAD6-202ENST00000557916 B4GALT4O60513 344 aa28.76■■■□□ 2.19
SMAD6-202ENST00000557916 CD4P01730 458 aa28.76■■■□□ 2.19
SMAD6-202ENST00000557916 SLC26A2P50443 739 aa28.76■■■□□ 2.19
SMAD6-202ENST00000557916 FAAP100Q0VG06 881 aa28.76■■■□□ 2.19
SMAD6-202ENST00000557916 NCAPH2Q6IBW4 605 aa28.76■■■□□ 2.19
SMAD6-202ENST00000557916 TRMT13Q9NUP7 481 aaKnown RBP28.76■■■□□ 2.19
SMAD6-202ENST00000557916 CLTBP09497 229 aa28.75■■■□□ 2.19
SMAD6-202ENST00000557916 ZSCAN22P10073 491 aaPredicted RBP28.75■■■□□ 2.19
SMAD6-202ENST00000557916 PLCB4Q15147 1175 aa28.75■■■□□ 2.19
SMAD6-202ENST00000557916 FOXD4L5Q5VV16 416 aaPredicted RBP28.75■■■□□ 2.19
SMAD6-202ENST00000557916 FOXD4L4Q8WXT5 416 aaPredicted RBP28.75■■■□□ 2.19
SMAD6-202ENST00000557916 LAD1O00515 517 aa28.74■■■□□ 2.19
SMAD6-202ENST00000557916 ANP32AP39687 249 aaKnown RBP28.74■■■□□ 2.19
SMAD6-202ENST00000557916 PKP1Q13835 747 aa28.74■■■□□ 2.19
SMAD6-202ENST00000557916 GDF6Q6KF10 455 aaPredicted RBP28.74■■■□□ 2.19
SMAD6-202ENST00000557916 FAM173BQ6P4H8 233 aa28.74■■■□□ 2.19
SMAD6-202ENST00000557916 PDLIM7Q9NR12 457 aa28.74■■■□□ 2.19
SMAD6-202ENST00000557916 TRPC6Q9Y210 931 aa28.74■■■□□ 2.19
SMAD6-202ENST00000557916 IGSF9BQ9UPX0 1349 aa28.73■■■□□ 2.19
SMAD6-202ENST00000557916 C17orf102A2RUQ5 167 aa28.73■■■□□ 2.19
SMAD6-202ENST00000557916 EPHA7Q15375 998 aa28.73■■■□□ 2.19
SMAD6-202ENST00000557916 PTGISQ16647 500 aa28.73■■■□□ 2.19
SMAD6-202ENST00000557916 CKAP2LQ8IYA6 745 aa28.73■■■□□ 2.19
SMAD6-202ENST00000557916 TNPO1Q92973 898 aaKnown RBP28.73■■■□□ 2.19
SMAD6-202ENST00000557916 PRDM5Q9NQX1 630 aaPredicted RBP28.73■■■□□ 2.19
SMAD6-202ENST00000557916 TMEM39AQ9NV64 488 aa28.73■■■□□ 2.19
SMAD6-202ENST00000557916 SETD4Q9NVD3 440 aa28.73■■■□□ 2.19
SMAD6-202ENST00000557916 NOD1Q9Y239 953 aa28.73■■■□□ 2.19
SMAD6-202ENST00000557916 POTEB3A0JP26 581 aa28.72■■■□□ 2.19
SMAD6-202ENST00000557916 ATP4AP20648 1035 aa28.72■■■□□ 2.19
SMAD6-202ENST00000557916 TECP42680 631 aa28.72■■■□□ 2.19
SMAD6-202ENST00000557916 PPFIA1Q13136 1202 aa28.72■■■□□ 2.19
SMAD6-202ENST00000557916 UGCGQ16739 394 aa28.72■■■□□ 2.19
SMAD6-202ENST00000557916 TMEM266Q2M3C6 531 aa28.72■■■□□ 2.19
SMAD6-202ENST00000557916 POTEBQ6S5H4 581 aa28.72■■■□□ 2.19
SMAD6-202ENST00000557916 ATP6V0A1Q93050 837 aa28.72■■■□□ 2.19
SMAD6-202ENST00000557916 PRKAG2Q9UGJ0 569 aa28.72■■■□□ 2.19
SMAD6-202ENST00000557916 NRCAMQ92823 1304 aa28.71■■■□□ 2.19
SMAD6-202ENST00000557916 PRPHP41219 470 aa28.71■■■□□ 2.19
SMAD6-202ENST00000557916 ZNF200P98182 395 aaPredicted RBP28.71■■■□□ 2.19
SMAD6-202ENST00000557916 ATP2C1P98194 919 aaPredicted RBP28.71■■■□□ 2.19
SMAD6-202ENST00000557916 HIC1Q14526 733 aa28.71■■■□□ 2.19
SMAD6-202ENST00000557916 SH3RF1Q7Z6J0 888 aa28.71■■■□□ 2.19
SMAD6-202ENST00000557916 BANK1Q8NDB2 785 aa28.71■■■□□ 2.19
SMAD6-202ENST00000557916 ATP8B4Q8TF62 1192 aa28.71■■■□□ 2.19
SMAD6-202ENST00000557916 ZMYND8Q9ULU4 1186 aaPredicted RBP28.71■■■□□ 2.19
SMAD6-202ENST00000557916 POTEMA6NI47 508 aa28.7■■■□□ 2.19
SMAD6-202ENST00000557916 F13A1P00488 732 aa28.7■■■□□ 2.19
SMAD6-202ENST00000557916 GNAT1P11488 350 aa28.7■■■□□ 2.19
SMAD6-202ENST00000557916 INSRRP14616 1297 aa28.7■■■□□ 2.19
SMAD6-202ENST00000557916 HOXC8P31273 242 aa28.7■■■□□ 2.19
SMAD6-202ENST00000557916 SF3A1Q15459 793 aaKnown RBP28.7■■■□□ 2.19
SMAD6-202ENST00000557916 TRMT1LQ7Z2T5 733 aaKnown RBP28.7■■■□□ 2.19
SMAD6-202ENST00000557916 CEP131Q9UPN4 1083 aa28.7■■■□□ 2.19
SMAD6-202ENST00000557916 ZNF862O60290 1169 aa28.69■■■□□ 2.18
SMAD6-202ENST00000557916 BMP15O95972 392 aa28.69■■■□□ 2.18
SMAD6-202ENST00000557916 P4HBP07237 508 aaKnown RBP28.69■■■□□ 2.18
SMAD6-202ENST00000557916 SYN1P17600 705 aa28.69■■■□□ 2.18
SMAD6-202ENST00000557916 FXR2P51116 673 aaKnown RBP eCLIP28.69■■■□□ 2.18
SMAD6-202ENST00000557916 PSMC5P62195 406 aa28.69■■■□□ 2.18
SMAD6-202ENST00000557916 GRIK4Q16099 956 aa28.69■■■□□ 2.18
SMAD6-202ENST00000557916 LMBR1Q8WVP7 490 aa28.69■■■□□ 2.18
SMAD6-202ENST00000557916 TBX21Q9UL17 535 aa28.69■■■□□ 2.18
SMAD6-202ENST00000557916 TRIM43BA6NCK2 446 aa28.69■■■□□ 2.18
SMAD6-202ENST00000557916 KIAA0355O15063 1070 aa28.69■■■□□ 2.18
SMAD6-202ENST00000557916 HBP1O60381 514 aa28.69■■■□□ 2.18
SMAD6-202ENST00000557916 CYP2C9P11712 490 aa28.69■■■□□ 2.18
SMAD6-202ENST00000557916 QARSP47897 775 aaKnown RBP28.69■■■□□ 2.18
SMAD6-202ENST00000557916 PRKCEQ02156 737 aa28.69■■■□□ 2.18
SMAD6-202ENST00000557916 DTHD1Q6ZMT9 781 aa28.69■■■□□ 2.18
SMAD6-202ENST00000557916 BBXQ8WY36 941 aaPredicted RBP28.69■■■□□ 2.18
SMAD6-202ENST00000557916 TRIM43Q96BQ3 446 aaPredicted RBP28.69■■■□□ 2.18
SMAD6-202ENST00000557916 DYDC2Q96IM9 177 aa28.69■■■□□ 2.18
SMAD6-202ENST00000557916 FAM167AQ96KS9 214 aa28.69■■■□□ 2.18
SMAD6-202ENST00000557916 CTAGE1Q96RT6 745 aa28.69■■■□□ 2.18
SMAD6-202ENST00000557916 EIF2AK1Q9BQI3 630 aaKnown RBP28.69■■■□□ 2.18
SMAD6-202ENST00000557916 FTOQ9C0B1 505 aaKnown RBP eCLIP28.69■■■□□ 2.18
SMAD6-202ENST00000557916 RGL1Q9NZL6 768 aa28.69■■■□□ 2.18
SMAD6-202ENST00000557916 DAXXQ9UER7 740 aaPredicted RBP28.69■■■□□ 2.18
SMAD6-202ENST00000557916 CLIC4Q9Y696 253 aa28.69■■■□□ 2.18
SMAD6-202ENST00000557916 RRN3P2A6NIE6 340 aa28.68■■■□□ 2.18
SMAD6-202ENST00000557916 IGBP1P78318 339 aa28.68■■■□□ 2.18
SMAD6-202ENST00000557916 NRBP2Q9NSY0 501 aa28.68■■■□□ 2.18
SMAD6-202ENST00000557916 PDE4DIPQ5VU43 2346 aa28.67■■■□□ 2.18
SMAD6-202ENST00000557916 TREHO43280 583 aa28.67■■■□□ 2.18
SMAD6-202ENST00000557916 DKC1O60832 514 aaKnown RBP eCLIP28.67■■■□□ 2.18
SMAD6-202ENST00000557916 BRD1O95696 1058 aa28.67■■■□□ 2.18
SMAD6-202ENST00000557916 OATP04181 439 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms