RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 DOCK5Q9H7D0 1870 aa16.16■□□□□ 0.18
USP3-205ENST00000557884 IGKV6D-21A0A0A0MT36 114 aa16.16■□□□□ 0.18
USP3-205ENST00000557884 TRIM43BA6NCK2 446 aa16.16■□□□□ 0.18
USP3-205ENST00000557884 EML1O00423 815 aa16.16■□□□□ 0.18
USP3-205ENST00000557884 CYP2C9P11712 490 aa16.16■□□□□ 0.18
USP3-205ENST00000557884 JAK3P52333 1124 aa16.16■□□□□ 0.18
USP3-205ENST00000557884 PTPN11Q06124 597 aaPredicted RBP16.16■□□□□ 0.18
USP3-205ENST00000557884 HIC1Q14526 733 aa16.16■□□□□ 0.18
USP3-205ENST00000557884 PTGISQ16647 500 aa16.16■□□□□ 0.18
USP3-205ENST00000557884 FOXD4L5Q5VV16 416 aaPredicted RBP16.16■□□□□ 0.18
USP3-205ENST00000557884 NCAPH2Q6IBW4 605 aa16.16■□□□□ 0.18
USP3-205ENST00000557884 B3GNT9Q6UX72 402 aa16.16■□□□□ 0.18
USP3-205ENST00000557884 TRMT1LQ7Z2T5 733 aaKnown RBP16.16■□□□□ 0.18
USP3-205ENST00000557884 SESTD1Q86VW0 696 aa16.16■□□□□ 0.18
USP3-205ENST00000557884 SLFN12Q8IYM2 578 aa16.16■□□□□ 0.18
USP3-205ENST00000557884 FOXD4L4Q8WXT5 416 aaPredicted RBP16.16■□□□□ 0.18
USP3-205ENST00000557884 TRIM43Q96BQ3 446 aaPredicted RBP16.16■□□□□ 0.18
USP3-205ENST00000557884 MTMR9Q96QG7 549 aa16.16■□□□□ 0.18
USP3-205ENST00000557884 SETD4Q9NVD3 440 aa16.16■□□□□ 0.18
USP3-205ENST00000557884 PRKAG2Q9UGJ0 569 aa16.16■□□□□ 0.18
USP3-205ENST00000557884 TRPC6Q9Y210 931 aa16.16■□□□□ 0.18
USP3-205ENST00000557884 C17orf102A2RUQ5 167 aa16.15■□□□□ 0.18
USP3-205ENST00000557884 OR52Z1P0C646 297 aa16.15■□□□□ 0.18
USP3-205ENST00000557884 SFNP31947 248 aa16.15■□□□□ 0.18
USP3-205ENST00000557884 IGBP1P78318 339 aa16.15■□□□□ 0.18
USP3-205ENST00000557884 RESTQ13127 1097 aa16.15■□□□□ 0.18
USP3-205ENST00000557884 PPFIA1Q13136 1202 aa16.15■□□□□ 0.18
USP3-205ENST00000557884 PPP2R5CQ13362 524 aa16.15■□□□□ 0.18
USP3-205ENST00000557884 PLCB4Q15147 1175 aa16.15■□□□□ 0.18
USP3-205ENST00000557884 UGCGQ16739 394 aa16.15■□□□□ 0.18
USP3-205ENST00000557884 RILPL1Q5EBL4 403 aa16.15■□□□□ 0.18
USP3-205ENST00000557884 PLPPR4Q7Z2D5 763 aa16.15■□□□□ 0.18
USP3-205ENST00000557884 BRAPQ7Z569 592 aa16.15■□□□□ 0.18
USP3-205ENST00000557884 CKAP2LQ8IYA6 745 aa16.15■□□□□ 0.18
USP3-205ENST00000557884 PPP1R12CQ9BZL4 782 aa16.15■□□□□ 0.18
USP3-205ENST00000557884 TBX21Q9UL17 535 aa16.15■□□□□ 0.18
USP3-205ENST00000557884 ATP4AP20648 1035 aa16.14■□□□□ 0.17
USP3-205ENST00000557884 ITGB8P26012 769 aa16.14■□□□□ 0.17
USP3-205ENST00000557884 ORC2Q13416 577 aaPredicted RBP16.14■□□□□ 0.17
USP3-205ENST00000557884 FAM173BQ6P4H8 233 aa16.14■□□□□ 0.17
USP3-205ENST00000557884 BANK1Q8NDB2 785 aa16.14■□□□□ 0.17
USP3-205ENST00000557884 RDM1Q8NG50 284 aa16.14■□□□□ 0.17
USP3-205ENST00000557884 AFAP1L1Q8TED9 768 aa16.14■□□□□ 0.17
USP3-205ENST00000557884 ATP6V0A1Q93050 837 aa16.14■□□□□ 0.17
USP3-205ENST00000557884 TTC12Q9H892 705 aaPredicted RBP16.14■□□□□ 0.17
USP3-205ENST00000557884 PCDHA12Q9UN75 941 aa16.14■□□□□ 0.17
USP3-205ENST00000557884 SCN10AQ9Y5Y9 1956 aa16.14■□□□□ 0.17
USP3-205ENST00000557884 ALPK3Q96L96 1907 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 PDE4DIPQ5VU43 2346 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 POTEB3A0JP26 581 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 KIAA0355O15063 1070 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 INSRRP14616 1297 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 RAG1P15918 1043 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 MDM2Q00987 491 aaPredicted RBP16.13■□□□□ 0.17
USP3-205ENST00000557884 PRKCEQ02156 737 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 SPIRE1Q08AE8 756 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 PTGDRQ13258 359 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 GRIK4Q16099 956 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 POTEBQ6S5H4 581 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 C4orf32Q8N8J7 132 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 ATP8B4Q8TF62 1192 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 LMBR1Q8WVP7 490 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 TRAPPC12Q8WVT3 735 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 ZBTB10Q96DT7 871 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 CTAGE1Q96RT6 745 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 HIPK3Q9H422 1215 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.13■□□□□ 0.17
USP3-205ENST00000557884 MAFBQ9Y5Q3 323 aaPredicted RBP16.13■□□□□ 0.17
USP3-205ENST00000557884 UMODL1Q5DID0 1318 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 IGSF9BQ9UPX0 1349 aa16.13■□□□□ 0.17
USP3-205ENST00000557884 CEP290O15078 2479 aa16.12■□□□□ 0.17
USP3-205ENST00000557884 POTEMA6NI47 508 aa16.12■□□□□ 0.17
USP3-205ENST00000557884 TREHO43280 583 aa16.12■□□□□ 0.17
USP3-205ENST00000557884 ZNF862O60290 1169 aa16.12■□□□□ 0.17
USP3-205ENST00000557884 CYP2C18P33260 490 aa16.12■□□□□ 0.17
USP3-205ENST00000557884 TECP42680 631 aa16.12■□□□□ 0.17
USP3-205ENST00000557884 SLC26A2P50443 739 aa16.12■□□□□ 0.17
USP3-205ENST00000557884 CYP4A11Q02928 519 aa16.12■□□□□ 0.17
USP3-205ENST00000557884 PKP1Q13835 747 aa16.12■□□□□ 0.17
USP3-205ENST00000557884 EPHA7Q15375 998 aa16.12■□□□□ 0.17
USP3-205ENST00000557884 BADQ92934 168 aa16.12■□□□□ 0.17
USP3-205ENST00000557884 LBHD1Q9BQE6 289 aaPredicted RBP16.12■□□□□ 0.17
USP3-205ENST00000557884 NOC4LQ9BVI4 516 aaKnown RBP16.12■□□□□ 0.17
USP3-205ENST00000557884 FTOQ9C0B1 505 aaKnown RBP eCLIP16.12■□□□□ 0.17
USP3-205ENST00000557884 RGL1Q9NZL6 768 aa16.12■□□□□ 0.17
USP3-205ENST00000557884 TIMP1P01033 207 aa16.11■□□□□ 0.17
USP3-205ENST00000557884 GNAT1P11488 350 aa16.11■□□□□ 0.17
USP3-205ENST00000557884 HOXC8P31273 242 aa16.11■□□□□ 0.17
USP3-205ENST00000557884 MAGEA10P43363 369 aaPredicted RBP16.11■□□□□ 0.17
USP3-205ENST00000557884 DHX38Q92620 1227 aaKnown RBP16.11■□□□□ 0.17
USP3-205ENST00000557884 WNT8BQ93098 351 aa16.11■□□□□ 0.17
USP3-205ENST00000557884 DYDC2Q96IM9 177 aa16.11■□□□□ 0.17
USP3-205ENST00000557884 NRCAMQ92823 1304 aa16.11■□□□□ 0.17
USP3-205ENST00000557884 TMEM150BA6NC51 233 aa16.1■□□□□ 0.17
USP3-205ENST00000557884 HBP1O60381 514 aa16.1■□□□□ 0.17
USP3-205ENST00000557884 OATP04181 439 aa16.1■□□□□ 0.17
USP3-205ENST00000557884 P4HBP07237 508 aaKnown RBP16.1■□□□□ 0.17
USP3-205ENST00000557884 ZSCAN22P10073 491 aaPredicted RBP16.1■□□□□ 0.17
USP3-205ENST00000557884 QARSP47897 775 aaKnown RBP16.1■□□□□ 0.17
USP3-205ENST00000557884 CCL23P55773 120 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms