RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 GJA10Q969M2 543 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 KCNMB3Q9NPA1 279 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 PHF24Q9UPV7 400 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 KIF3AQ9Y496 699 aa10.24□□□□□ -0.77
CHD8-214ENST00000557727 RCCD1A6NED2 376 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 DNM1LO00429 736 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 DYNC1LI2O43237 492 aaPredicted RBP10.23□□□□□ -0.77
CHD8-214ENST00000557727 ACTN4O43707 911 aaKnown RBP10.23□□□□□ -0.77
CHD8-214ENST00000557727 GH1P01241 217 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 MMP3P08254 477 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 C6orf222P0C671 652 aaPredicted RBP10.23□□□□□ -0.77
CHD8-214ENST00000557727 KCNA10Q16322 511 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 FSCN1Q16658 493 aaKnown RBP10.23□□□□□ -0.77
CHD8-214ENST00000557727 LETM2Q2VYF4 491 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 KMT5BQ4FZB7 885 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 CYFIP1Q7L576 1253 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 NLRX1Q86UT6 975 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 C4orf32Q8N8J7 132 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 OR6J1Q8NGC5 347 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 PPTC7Q8NI37 304 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 AFG1LQ8WV93 481 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 KAT2BQ92831 832 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 CDHR1Q96JP9 859 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 UIMC1Q96RL1 719 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 BRMS1Q9HCU9 246 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 ZDHHC9Q9Y397 364 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 GRIN2DO15399 1336 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 NFASCO94856 1347 aa10.23□□□□□ -0.77
CHD8-214ENST00000557727 LTBP2Q14767 1821 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 GSTTP1A0A1W2PQM5 241 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 RNF223E7ERA6 249 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 IPO5O00410 1097 aaKnown RBP10.22□□□□□ -0.77
CHD8-214ENST00000557727 STX6O43752 255 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 SORBS3O60504 671 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 PSMD10O75832 226 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 TFRCP02786 760 aaKnown RBP10.22□□□□□ -0.77
CHD8-214ENST00000557727 ASGR1P07306 291 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 GCFC2P16383 781 aaKnown RBP10.22□□□□□ -0.77
CHD8-214ENST00000557727 CAPN2P17655 700 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 PDCP20941 246 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 ACLYP53396 1101 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 PURAQ00577 322 aaKnown RBP10.22□□□□□ -0.77
CHD8-214ENST00000557727 SETQ01105 290 aaPredicted RBP10.22□□□□□ -0.77
CHD8-214ENST00000557727 SPIRE1Q08AE8 756 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 NEDD9Q14511 834 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 SNX17Q15036 470 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 SAFBQ15424 915 aaKnown RBP eCLIP10.22□□□□□ -0.77
CHD8-214ENST00000557727 FERMT3Q86UX7 667 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 MTMR9Q96QG7 549 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 PCYT2Q99447 389 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 GPR20Q99678 358 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 C16orf70Q9BSU1 422 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 TSEN34Q9BSV6 310 aaKnown RBP10.22□□□□□ -0.77
CHD8-214ENST00000557727 TMEM60Q9H2L4 133 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 PKD2L1Q9P0L9 805 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 DDX25Q9UHL0 483 aaKnown RBP10.22□□□□□ -0.77
CHD8-214ENST00000557727 VAV3Q9UKW4 847 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 PCDHB6Q9Y5E3 794 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 EVPLQ92817 2033 aa10.22□□□□□ -0.77
CHD8-214ENST00000557727 SIP14410 1827 aa10.21□□□□□ -0.77
CHD8-214ENST00000557727 IGKV6D-21A0A0A0MT36 114 aa10.21□□□□□ -0.77
CHD8-214ENST00000557727 A0A1W2PQ45 241 aaPredicted RBP10.21□□□□□ -0.77
CHD8-214ENST00000557727 A0A1W2PQY0 241 aa10.21□□□□□ -0.77
CHD8-214ENST00000557727 VPS37CA5D8V6 355 aaPredicted RBP10.21□□□□□ -0.77
CHD8-214ENST00000557727 HAS3O00219 553 aa10.21□□□□□ -0.77
CHD8-214ENST00000557727 CCNT1O60563 726 aaKnown RBP10.21□□□□□ -0.77
CHD8-214ENST00000557727 ATG7O95352 703 aa10.21□□□□□ -0.77
CHD8-214ENST00000557727 ZNF76P36508 570 aa10.21□□□□□ -0.77
CHD8-214ENST00000557727 TRAPPC10P48553 1259 aa10.21□□□□□ -0.77
CHD8-214ENST00000557727 RGS19P49795 217 aa10.21□□□□□ -0.77
CHD8-214ENST00000557727 LAMC2Q13753 1193 aa10.21□□□□□ -0.77
CHD8-214ENST00000557727 GNASQ5JWF2 1037 aa10.21□□□□□ -0.77
CHD8-214ENST00000557727 TTC38Q5R3I4 469 aa10.21□□□□□ -0.77
CHD8-214ENST00000557727 FAM173BQ6P4H8 233 aa10.21□□□□□ -0.77
CHD8-214ENST00000557727 CXCL17Q6UXB2 119 aa10.21□□□□□ -0.77
CHD8-214ENST00000557727 RNF180Q86T96 592 aa10.21□□□□□ -0.77
CHD8-214ENST00000557727 DHX37Q8IY37 1157 aaKnown RBP10.21□□□□□ -0.77
CHD8-214ENST00000557727 ARRDC4Q8NCT1 418 aa10.21□□□□□ -0.77
CHD8-214ENST00000557727 PAWRQ96IZ0 340 aaKnown RBP10.21□□□□□ -0.77
CHD8-214ENST00000557727 AP5M1Q9H0R1 490 aa10.21□□□□□ -0.77
CHD8-214ENST00000557727 JPH1Q9HDC5 661 aaPredicted RBP10.21□□□□□ -0.77
CHD8-214ENST00000557727 LOXHD1Q8IVV2 1947 aa10.21□□□□□ -0.78
CHD8-214ENST00000557727 MOXD2PA6NHM9 499 aa10.2□□□□□ -0.78
CHD8-214ENST00000557727 H3BQV1 296 aa10.2□□□□□ -0.78
CHD8-214ENST00000557727 TBX3O15119 743 aa10.2□□□□□ -0.78
CHD8-214ENST00000557727 LGR5O75473 907 aa10.2□□□□□ -0.78
CHD8-214ENST00000557727 F2P00734 622 aa10.2□□□□□ -0.78
CHD8-214ENST00000557727 SLC19A1P41440 591 aa10.2□□□□□ -0.78
CHD8-214ENST00000557727 ACTR2P61160 394 aa10.2□□□□□ -0.78
CHD8-214ENST00000557727 ZNF174Q15697 407 aa10.2□□□□□ -0.78
CHD8-214ENST00000557727 MCTP1Q6DN14 999 aa10.2□□□□□ -0.78
CHD8-214ENST00000557727 ABHD15Q6UXT9 468 aa10.2□□□□□ -0.78
CHD8-214ENST00000557727 BRAPQ7Z569 592 aa10.2□□□□□ -0.78
CHD8-214ENST00000557727 TRIM50Q86XT4 487 aa10.2□□□□□ -0.78
CHD8-214ENST00000557727 SLC43A3Q8NBI5 491 aa10.2□□□□□ -0.78
CHD8-214ENST00000557727 GIMAP8Q8ND71 665 aaPredicted RBP10.2□□□□□ -0.78
CHD8-214ENST00000557727 SPATA33Q96N06 139 aa10.2□□□□□ -0.78
CHD8-214ENST00000557727 CTAGE1Q96RT6 745 aa10.2□□□□□ -0.78
CHD8-214ENST00000557727 RIT2Q99578 217 aa10.2□□□□□ -0.78
CHD8-214ENST00000557727 ZNF577Q9BSK1 485 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms