RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 FAM26DQ5JW98 314 aa15.55■□□□□ 0.08
TMEM260-215ENST00000557626 ATAT1Q5SQI0 421 aa15.55■□□□□ 0.08
TMEM260-215ENST00000557626 RARS2Q5T160 578 aaKnown RBP15.55■□□□□ 0.08
TMEM260-215ENST00000557626 NPAS4Q8IUM7 802 aa15.55■□□□□ 0.08
TMEM260-215ENST00000557626 THNSL1Q8IYQ7 743 aa15.55■□□□□ 0.08
TMEM260-215ENST00000557626 TMEM57Q8N5G2 664 aa15.55■□□□□ 0.08
TMEM260-215ENST00000557626 KDF1Q8NAX2 398 aaPredicted RBP15.55■□□□□ 0.08
TMEM260-215ENST00000557626 EAF2Q96CJ1 260 aaPredicted RBP15.55■□□□□ 0.08
TMEM260-215ENST00000557626 SLC4A4Q9Y6R1 1079 aa15.55■□□□□ 0.08
TMEM260-215ENST00000557626 HIDE1A8MVS5 230 aa15.54■□□□□ 0.08
TMEM260-215ENST00000557626 SMIM10L2AP0DMW4 78 aa15.54■□□□□ 0.08
TMEM260-215ENST00000557626 SMIM10L2BP0DMW5 78 aa15.54■□□□□ 0.08
TMEM260-215ENST00000557626 HOXD8P13378 290 aaPredicted RBP15.54■□□□□ 0.08
TMEM260-215ENST00000557626 SPEM2Q0P670 501 aa15.54■□□□□ 0.08
TMEM260-215ENST00000557626 TCF25Q9BQ70 676 aa15.54■□□□□ 0.08
TMEM260-215ENST00000557626 HCFC2Q9Y5Z7 792 aa15.54■□□□□ 0.08
TMEM260-215ENST00000557626 MIA3Q5JRA6 1907 aa15.54■□□□□ 0.08
TMEM260-215ENST00000557626 TAF4O00268 1085 aa15.53■□□□□ 0.08
TMEM260-215ENST00000557626 LAMTOR5O43504 91 aa15.53■□□□□ 0.08
TMEM260-215ENST00000557626 TBC1D4O60343 1298 aa15.53■□□□□ 0.08
TMEM260-215ENST00000557626 PPFIA4O75335 1185 aa15.53■□□□□ 0.08
TMEM260-215ENST00000557626 GNAI2P04899 355 aa15.53■□□□□ 0.08
TMEM260-215ENST00000557626 STAG3L1P0CL83 205 aa15.53■□□□□ 0.08
TMEM260-215ENST00000557626 PHLDB3Q6NSJ2 640 aa15.53■□□□□ 0.08
TMEM260-215ENST00000557626 OTOP3Q7RTS5 596 aa15.53■□□□□ 0.08
TMEM260-215ENST00000557626 ZNF444Q8N0Y2 327 aaPredicted RBP15.53■□□□□ 0.08
TMEM260-215ENST00000557626 CLEC4DQ8WXI8 215 aa15.53■□□□□ 0.08
TMEM260-215ENST00000557626 RANBP17Q9H2T7 1088 aaKnown RBP15.53■□□□□ 0.08
TMEM260-215ENST00000557626 EHMT1Q9H9B1 1298 aa15.53■□□□□ 0.08
TMEM260-215ENST00000557626 DDX41Q9UJV9 622 aaKnown RBP15.53■□□□□ 0.08
TMEM260-215ENST00000557626 FBXO4Q9UKT5 387 aa15.53■□□□□ 0.08
TMEM260-215ENST00000557626 PATJQ8NI35 1801 aa15.52■□□□□ 0.08
TMEM260-215ENST00000557626 CHRNA1P02708 482 aa15.52■□□□□ 0.08
TMEM260-215ENST00000557626 GATMP50440 423 aa15.52■□□□□ 0.08
TMEM260-215ENST00000557626 LPIN1Q14693 890 aa15.52■□□□□ 0.08
TMEM260-215ENST00000557626 RCSD1Q6JBY9 416 aa15.52■□□□□ 0.08
TMEM260-215ENST00000557626 LINC01599Q8WXQ3 324 aa15.52■□□□□ 0.08
TMEM260-215ENST00000557626 GPR20Q99678 358 aa15.52■□□□□ 0.08
TMEM260-215ENST00000557626 RNPEPQ9H4A4 650 aa15.52■□□□□ 0.08
TMEM260-215ENST00000557626 NGRNQ9NPE2 291 aaKnown RBP15.52■□□□□ 0.08
TMEM260-215ENST00000557626 IGSF9Q9P2J2 1179 aa15.52■□□□□ 0.08
TMEM260-215ENST00000557626 IGSF10Q6WRI0 2623 aa15.51■□□□□ 0.07
TMEM260-215ENST00000557626 SRRM3A6NNA2 597 aaPredicted RBP15.51■□□□□ 0.07
TMEM260-215ENST00000557626 GOLIM4O00461 696 aa15.51■□□□□ 0.07
TMEM260-215ENST00000557626 SURF6O75683 361 aaKnown RBP15.51■□□□□ 0.07
TMEM260-215ENST00000557626 GNAT1P11488 350 aa15.51■□□□□ 0.07
TMEM260-215ENST00000557626 GLULP15104 373 aa15.51■□□□□ 0.07
TMEM260-215ENST00000557626 IRX6P78412 446 aaPredicted RBP15.51■□□□□ 0.07
TMEM260-215ENST00000557626 CSTF1Q05048 431 aaKnown RBP15.51■□□□□ 0.07
TMEM260-215ENST00000557626 SLFNL1Q499Z3 407 aa15.51■□□□□ 0.07
TMEM260-215ENST00000557626 IL31Q6EBC2 164 aa15.51■□□□□ 0.07
TMEM260-215ENST00000557626 C12orf76Q8N812 135 aaPredicted RBP15.51■□□□□ 0.07
TMEM260-215ENST00000557626 ZBTB44Q8NCP5 570 aa15.51■□□□□ 0.07
TMEM260-215ENST00000557626 C16orf70Q9BSU1 422 aa15.51■□□□□ 0.07
TMEM260-215ENST00000557626 SPATA6Q9NWH7 488 aaPredicted RBP15.51■□□□□ 0.07
TMEM260-215ENST00000557626 ZSCAN32Q9NX65 697 aa15.51■□□□□ 0.07
TMEM260-215ENST00000557626 PUF60Q9UHX1 559 aaKnown RBP15.51■□□□□ 0.07
TMEM260-215ENST00000557626 LZTS1Q9Y250 596 aa15.51■□□□□ 0.07
TMEM260-215ENST00000557626 MRVI1Q9Y6F6 885 aa15.51■□□□□ 0.07
TMEM260-215ENST00000557626 FNDC1Q4ZHG4 1894 aaPredicted RBP15.5■□□□□ 0.07
TMEM260-215ENST00000557626 RALGAPA1Q6GYQ0 2036 aa15.5■□□□□ 0.07
TMEM260-215ENST00000557626 PRDM1O75626 825 aa15.5■□□□□ 0.07
TMEM260-215ENST00000557626 NONOQ15233 471 aaKnown RBP eCLIP15.5■□□□□ 0.07
TMEM260-215ENST00000557626 STXBP2Q15833 593 aa15.5■□□□□ 0.07
TMEM260-215ENST00000557626 CCDC149Q6ZUS6 474 aa15.5■□□□□ 0.07
TMEM260-215ENST00000557626 RASGRP2Q7LDG7 609 aa15.5■□□□□ 0.07
TMEM260-215ENST00000557626 PJA1Q8NG27 643 aa15.5■□□□□ 0.07
TMEM260-215ENST00000557626 MRPS27Q92552 414 aaKnown RBP15.5■□□□□ 0.07
TMEM260-215ENST00000557626 SPATA33Q96N06 139 aa15.5■□□□□ 0.07
TMEM260-215ENST00000557626 DNAJC2Q99543 621 aaKnown RBP15.5■□□□□ 0.07
TMEM260-215ENST00000557626 ZNF287Q9HBT7 754 aa15.5■□□□□ 0.07
TMEM260-215ENST00000557626 LRFN2Q9ULH4 789 aa15.5■□□□□ 0.07
TMEM260-215ENST00000557626 PLIN4Q96Q06 1357 aa15.49■□□□□ 0.07
TMEM260-215ENST00000557626 TMEM8BA6NDV4 472 aa15.49■□□□□ 0.07
TMEM260-215ENST00000557626 MINDY4BA8MYZ0 360 aa15.49■□□□□ 0.07
TMEM260-215ENST00000557626 H3BRB1 525 aa15.49■□□□□ 0.07
TMEM260-215ENST00000557626 SORBS3O60504 671 aa15.49■□□□□ 0.07
TMEM260-215ENST00000557626 LILRB5O75023 590 aa15.49■□□□□ 0.07
TMEM260-215ENST00000557626 ADD2P35612 726 aa15.49■□□□□ 0.07
TMEM260-215ENST00000557626 SBK1Q52WX2 424 aa15.49■□□□□ 0.07
TMEM260-215ENST00000557626 COLGALT1Q8NBJ5 622 aa15.49■□□□□ 0.07
TMEM260-215ENST00000557626 FOXQ1Q9C009 403 aa15.49■□□□□ 0.07
TMEM260-215ENST00000557626 TUT1Q9H6E5 874 aaKnown RBP15.49■□□□□ 0.07
TMEM260-215ENST00000557626 ARHGEF3Q9NR81 526 aa15.49■□□□□ 0.07
TMEM260-215ENST00000557626 SETD4Q9NVD3 440 aa15.49■□□□□ 0.07
TMEM260-215ENST00000557626 DZANK1Q9NVP4 752 aa15.49■□□□□ 0.07
TMEM260-215ENST00000557626 RAB23Q9ULC3 237 aa15.49■□□□□ 0.07
TMEM260-215ENST00000557626 KAT6AQ92794 2004 aa15.49■□□□□ 0.07
TMEM260-215ENST00000557626 AKAP13Q12802 2813 aa15.49■□□□□ 0.07
TMEM260-215ENST00000557626 LRP3O75074 770 aa15.48■□□□□ 0.07
TMEM260-215ENST00000557626 TSPY3P0CV98 308 aa15.48■□□□□ 0.07
TMEM260-215ENST00000557626 TSPY8P0CW00 308 aa15.48■□□□□ 0.07
TMEM260-215ENST00000557626 SCG2P13521 617 aa15.48■□□□□ 0.07
TMEM260-215ENST00000557626 IBSPP21815 317 aaPredicted RBP15.48■□□□□ 0.07
TMEM260-215ENST00000557626 POLA2Q14181 598 aa15.48■□□□□ 0.07
TMEM260-215ENST00000557626 CCDC96Q2M329 555 aa15.48■□□□□ 0.07
TMEM260-215ENST00000557626 HSDL1Q3SXM5 330 aa15.48■□□□□ 0.07
TMEM260-215ENST00000557626 KANK3Q6NY19 840 aa15.48■□□□□ 0.07
TMEM260-215ENST00000557626 TSHZ1Q6ZSZ6 1077 aa15.48■□□□□ 0.07
TMEM260-215ENST00000557626 TMC7Q7Z402 723 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms