RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 C1QTNF1Q9BXJ1 281 aa12.12□□□□□ -0.47
PSMC6-215ENST00000557517 GLT8D2Q9H1C3 349 aa12.12□□□□□ -0.47
PSMC6-215ENST00000557517 KCNH7Q9NS40 1196 aa12.12□□□□□ -0.47
PSMC6-215ENST00000557517 SETD4Q9NVD3 440 aa12.12□□□□□ -0.47
PSMC6-215ENST00000557517 PRRC2BQ5JSZ5 2229 aaKnown RBP12.12□□□□□ -0.47
PSMC6-215ENST00000557517 BRWD1Q9NSI6 2320 aa12.12□□□□□ -0.47
PSMC6-215ENST00000557517 EMSYQ7Z589 1322 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 NRCAMQ92823 1304 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 GOLGA8AA7E2F4 631 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 GOLGA8BA8MQT2 603 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 MEIS1O00470 390 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 LGR5O75473 907 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 REC8O95072 547 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 CA3P07451 260 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 CPA1P15085 419 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 RPS6KB1P23443 525 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 PSMA5P28066 241 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 TCF7P36402 384 aaPredicted RBP12.11□□□□□ -0.47
PSMC6-215ENST00000557517 THPOP40225 353 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 NAPAP54920 295 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 WDR5P61964 334 aaKnown RBP12.11□□□□□ -0.47
PSMC6-215ENST00000557517 TAP1Q03518 808 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 PFKFB3Q16875 520 aaPredicted RBP12.11□□□□□ -0.47
PSMC6-215ENST00000557517 CEP55Q53EZ4 464 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 ARSIQ5FYB1 569 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 FAM26DQ5JW98 314 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 PPP2R2DQ66LE6 453 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 BLOC1S2Q6QNY1 142 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 Q6ZUG5 572 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 FBXO22Q8NEZ5 403 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 DBF4BQ8NFT6 615 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 CYP2W1Q8TAV3 490 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 CRYGNQ8WXF5 182 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 RNF166Q96A37 237 aaPredicted RBP12.11□□□□□ -0.47
PSMC6-215ENST00000557517 JAKMIP1Q96N16 626 aaKnown RBP12.11□□□□□ -0.47
PSMC6-215ENST00000557517 ZNF215Q9UL58 517 aaPredicted RBP12.11□□□□□ -0.47
PSMC6-215ENST00000557517 TRANK1O15050 2925 aa12.11□□□□□ -0.47
PSMC6-215ENST00000557517 PRPF3O43395 683 aaKnown RBP12.1□□□□□ -0.47
PSMC6-215ENST00000557517 ATG7O95352 703 aa12.1□□□□□ -0.47
PSMC6-215ENST00000557517 GJB5O95377 273 aa12.1□□□□□ -0.47
PSMC6-215ENST00000557517 SREBF1P36956 1147 aa12.1□□□□□ -0.47
PSMC6-215ENST00000557517 METAP2P50579 478 aaKnown RBP eCLIP12.1□□□□□ -0.47
PSMC6-215ENST00000557517 APOBRQ0VD83 1088 aa12.1□□□□□ -0.47
PSMC6-215ENST00000557517 AP3B2Q13367 1082 aa12.1□□□□□ -0.47
PSMC6-215ENST00000557517 CCDC85BQ15834 202 aaPredicted RBP12.1□□□□□ -0.47
PSMC6-215ENST00000557517 NTRK3Q16288 839 aa12.1□□□□□ -0.47
PSMC6-215ENST00000557517 PKN1Q16512 942 aa12.1□□□□□ -0.47
PSMC6-215ENST00000557517 PLEKHG4Q58EX7 1191 aa12.1□□□□□ -0.47
PSMC6-215ENST00000557517 UTP14CQ5TAP6 766 aaKnown RBP12.1□□□□□ -0.47
PSMC6-215ENST00000557517 TRIM50Q86XT4 487 aa12.1□□□□□ -0.47
PSMC6-215ENST00000557517 BRF1Q92994 677 aa12.1□□□□□ -0.47
PSMC6-215ENST00000557517 ZMYND12Q9H0C1 365 aa12.1□□□□□ -0.47
PSMC6-215ENST00000557517 SMARCAD1Q9H4L7 1026 aa12.1□□□□□ -0.47
PSMC6-215ENST00000557517 EHMT1Q9H9B1 1298 aa12.1□□□□□ -0.47
PSMC6-215ENST00000557517 ERAP1Q9NZ08 941 aa12.1□□□□□ -0.47
PSMC6-215ENST00000557517 ESYT2A0FGR8 921 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 MBLAC1A4D2B0 266 aaPredicted RBP12.09□□□□□ -0.47
PSMC6-215ENST00000557517 STK25O00506 426 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 TLL1O43897 1013 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 ARHGEF15O94989 841 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 CYP3A4P08684 503 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 ARP10275 920 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 BMP1P13497 986 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 SCG2P13521 617 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 PDIA3P30101 505 aaKnown RBP12.09□□□□□ -0.47
PSMC6-215ENST00000557517 KCNJ6P48051 423 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 ADCY7P51828 1080 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 FGD1P98174 961 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 SP4Q02446 784 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 MARCH8Q5T0T0 291 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 MCTP2Q6DN12 878 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 NIPA1Q7RTP0 329 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 IL27Q8NEV9 243 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 LMBR1Q8WVP7 490 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 PCYT2Q99447 389 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 RAD9AQ99638 391 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 OSBPL7Q9BZF2 842 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 NFASCO94856 1347 aa12.09□□□□□ -0.47
PSMC6-215ENST00000557517 NID2Q14112 1375 aa12.08□□□□□ -0.48
PSMC6-215ENST00000557517 REV3LO60673 3130 aa12.08□□□□□ -0.48
PSMC6-215ENST00000557517 IGKV6D-21A0A0A0MT36 114 aa12.08□□□□□ -0.48
PSMC6-215ENST00000557517 DEFB103AP81534 67 aa12.08□□□□□ -0.48
PSMC6-215ENST00000557517 TAF2Q6P1X5 1199 aa12.08□□□□□ -0.48
PSMC6-215ENST00000557517 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.08□□□□□ -0.48
PSMC6-215ENST00000557517 RUFY3Q7L099 469 aa12.08□□□□□ -0.48
PSMC6-215ENST00000557517 PLPPR4Q7Z2D5 763 aa12.08□□□□□ -0.48
PSMC6-215ENST00000557517 TMCO2Q7Z6W1 182 aaPredicted RBP12.08□□□□□ -0.48
PSMC6-215ENST00000557517 NECAB3Q96P71 396 aaPredicted RBP12.08□□□□□ -0.48
PSMC6-215ENST00000557517 ANO3Q9BYT9 981 aa12.08□□□□□ -0.48
PSMC6-215ENST00000557517 TM6SF1Q9BZW5 370 aa12.08□□□□□ -0.48
PSMC6-215ENST00000557517 AGO4Q9HCK5 861 aaKnown RBP12.08□□□□□ -0.48
PSMC6-215ENST00000557517 JPH1Q9HDC5 661 aaPredicted RBP12.08□□□□□ -0.48
PSMC6-215ENST00000557517 TMEM260Q9NX78 707 aa12.08□□□□□ -0.48
PSMC6-215ENST00000557517 SLC9A2Q9UBY0 812 aa12.08□□□□□ -0.48
PSMC6-215ENST00000557517 RRN3P2A6NIE6 340 aa12.07□□□□□ -0.48
PSMC6-215ENST00000557517 FAM86B1E9PN63 330 aa12.07□□□□□ -0.48
PSMC6-215ENST00000557517 RFXAPO00287 272 aa12.07□□□□□ -0.48
PSMC6-215ENST00000557517 DHX15O43143 795 aaKnown RBP12.07□□□□□ -0.48
PSMC6-215ENST00000557517 CHRNA1P02708 482 aa12.07□□□□□ -0.48
PSMC6-215ENST00000557517 FAM86B2P0C5J1 330 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms