RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 RFX7Q2KHR2 1363 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 LOC100289279A0A1B0GTE1 492 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 TRIM43BA6NCK2 446 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 KBTBD13C9JR72 458 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 IGHA2P01877 340 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 PTMSP20962 102 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 CYP2C19P33261 490 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 MECOMQ03112 1051 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 TLE2Q04725 743 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 PPP2R3AQ06190 1150 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 DSC3Q14574 896 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 SNX17Q15036 470 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 TRIM60Q495X7 471 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 AKNAD1Q5T1N1 836 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 WDR78Q5VTH9 848 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 CNPY4Q8N129 248 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 TRIM43Q96BQ3 446 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-247ENST00000557311 UBL7Q96S82 380 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-247ENST00000557311 KRTAP9-9Q9BYP9 154 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 KRTAP9-4Q9BYQ2 154 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 ABCB6Q9NP58 842 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 PDLIM7Q9NR12 457 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 UNC80Q8N2C7 3258 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 MYH3P11055 1940 aa5.93□□□□□ -1.46
ATXN3-247ENST00000557311 SPEF2Q9C093 1822 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 ANKRD33BA6NCL7 494 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 KIAA0355O15063 1070 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 SEPT4O43236 478 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 STRNO43815 780 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 CNMDO75829 334 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 BAG3O95817 575 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 PTMAP06454 111 aaKnown RBP5.92□□□□□ -1.46
ATXN3-247ENST00000557311 BMP3P12645 472 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 RAG1P15918 1043 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 ADORA1P30542 326 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 ADCYAP1R1P41586 468 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 EPHB4P54760 987 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 TIMM10P62072 90 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 JAG1P78504 1218 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 HNRNPUQ00839 825 aaKnown RBP eCLIP5.92□□□□□ -1.46
ATXN3-247ENST00000557311 RASGRF1Q13972 1273 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 GRB14Q14449 540 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 HSP90AA2PQ14568 343 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-247ENST00000557311 OLFML2BQ68BL8 750 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 CATSPERGQ6ZRH7 1159 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 PRR23CQ6ZRP0 262 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 DPP9Q86TI2 863 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 METTL16Q86W50 562 aaKnown RBP5.92□□□□□ -1.46
ATXN3-247ENST00000557311 TEX11Q8IYF3 940 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 TRPV1Q8NER1 839 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 NPLOC4Q8TAT6 608 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 PPM1EQ8WY54 764 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 NSUN4Q96CB9 384 aaKnown RBP5.92□□□□□ -1.46
ATXN3-247ENST00000557311 TIFAQ96CG3 184 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 UHRF1Q96T88 793 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-247ENST00000557311 SIL1Q9H173 461 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 SLC5A4Q9NY91 659 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 THEGQ9P2T0 379 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 HDAC5Q9UQL6 1122 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 RAXQ9Y2V3 346 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 VCANP13611 3396 aa5.92□□□□□ -1.46
ATXN3-247ENST00000557311 B3GALT4O96024 378 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 P4HBP07237 508 aaKnown RBP5.91□□□□□ -1.46
ATXN3-247ENST00000557311 CLTBP09497 229 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 CYBAP13498 195 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 DRD2P14416 443 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 ITPKAP23677 461 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 ITGB8P26012 769 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 PREPP48147 710 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 USP14P54578 494 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 FPGSQ05932 587 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 MVPQ14764 893 aaKnown RBP5.91□□□□□ -1.46
ATXN3-247ENST00000557311 LRRC41Q15345 812 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 EXOSC6Q5RKV6 272 aaKnown RBP5.91□□□□□ -1.46
ATXN3-247ENST00000557311 ATF7IPQ6VMQ6 1270 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 LBX2Q6XYB7 198 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 CRACR2BQ8N4Y2 399 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-247ENST00000557311 FBF1Q8TES7 1133 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 ZNF384Q8TF68 577 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 SECISBP2LQ93073 1101 aaKnown RBP5.91□□□□□ -1.46
ATXN3-247ENST00000557311 FERMT2Q96AC1 680 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 C12orf42Q96LP6 360 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 NOL10Q9BSC4 688 aaKnown RBP5.91□□□□□ -1.46
ATXN3-247ENST00000557311 CBX8Q9HC52 389 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 COPRSQ9NQ92 184 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 TMEM39AQ9NV64 488 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 HOXC10Q9NYD6 342 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 RAI14Q9P0K7 980 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 ZBTB21Q9ULJ3 1066 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 AP4E1Q9UPM8 1137 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 PTPRCP08575 1304 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 SYNGAP1Q96PV0 1343 aa5.91□□□□□ -1.46
ATXN3-247ENST00000557311 DCDC2CA8MYV0 355 aa5.9□□□□□ -1.46
ATXN3-247ENST00000557311 GSTT1P30711 240 aa5.9□□□□□ -1.46
ATXN3-247ENST00000557311 AP3B2Q13367 1082 aa5.9□□□□□ -1.46
ATXN3-247ENST00000557311 UVSSAQ2YD98 709 aa5.9□□□□□ -1.46
ATXN3-247ENST00000557311 PRAMEF19Q5SWL8 479 aa5.9□□□□□ -1.46
ATXN3-247ENST00000557311 ANO1Q5XXA6 986 aa5.9□□□□□ -1.46
ATXN3-247ENST00000557311 CCDC174Q6PII3 467 aa5.9□□□□□ -1.46
ATXN3-247ENST00000557311 DYMQ7RTS9 669 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms