RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 CHD9Q3L8U1 2897 aa18.8■□□□□ 0.6
VSX1-207ENST00000557285 IGLV3-22A0A075B6J6 115 aa18.8■□□□□ 0.6
VSX1-207ENST00000557285 IPO5O00410 1097 aaKnown RBP18.8■□□□□ 0.6
VSX1-207ENST00000557285 LGR5O75473 907 aa18.8■□□□□ 0.6
VSX1-207ENST00000557285 CCNE2O96020 404 aa18.8■□□□□ 0.6
VSX1-207ENST00000557285 CA3P07451 260 aa18.8■□□□□ 0.6
VSX1-207ENST00000557285 FAM117BQ6P1L5 589 aa18.8■□□□□ 0.6
VSX1-207ENST00000557285 HERC6Q8IVU3 1022 aa18.8■□□□□ 0.6
VSX1-207ENST00000557285 NECAB1Q8N987 351 aa18.8■□□□□ 0.6
VSX1-207ENST00000557285 TRAPPC12Q8WVT3 735 aa18.8■□□□□ 0.6
VSX1-207ENST00000557285 CRYGNQ8WXF5 182 aa18.8■□□□□ 0.6
VSX1-207ENST00000557285 ZBED2Q9BTP6 218 aa18.8■□□□□ 0.6
VSX1-207ENST00000557285 OSBPL7Q9BZF2 842 aa18.8■□□□□ 0.6
VSX1-207ENST00000557285 CERS4Q9HA82 394 aa18.8■□□□□ 0.6
VSX1-207ENST00000557285 SH3GLB2Q9NR46 395 aa18.8■□□□□ 0.6
VSX1-207ENST00000557285 TCEAL9Q9UHQ7 104 aa18.8■□□□□ 0.6
VSX1-207ENST00000557285 TUBE1Q9UJT0 475 aa18.8■□□□□ 0.6
VSX1-207ENST00000557285 KCNJ14Q9UNX9 436 aa18.8■□□□□ 0.6
VSX1-207ENST00000557285 CDKL5O76039 1030 aa18.79■□□□□ 0.6
VSX1-207ENST00000557285 STAT5BP51692 787 aa18.79■□□□□ 0.6
VSX1-207ENST00000557285 ADAM17P78536 824 aa18.79■□□□□ 0.6
VSX1-207ENST00000557285 SETQ01105 290 aaPredicted RBP18.79■□□□□ 0.6
VSX1-207ENST00000557285 IKBKEQ14164 716 aa18.79■□□□□ 0.6
VSX1-207ENST00000557285 TRMT1LQ7Z2T5 733 aaKnown RBP18.79■□□□□ 0.6
VSX1-207ENST00000557285 FAM49AQ9H0Q0 323 aaPredicted RBP18.79■□□□□ 0.6
VSX1-207ENST00000557285 PCDHA4Q9UN74 947 aa18.79■□□□□ 0.6
VSX1-207ENST00000557285 PRUNE2Q8WUY3 3088 aa18.79■□□□□ 0.6
VSX1-207ENST00000557285 TLL1O43897 1013 aa18.78■□□□□ 0.6
VSX1-207ENST00000557285 PFKFB2O60825 505 aa18.78■□□□□ 0.6
VSX1-207ENST00000557285 INSRRP14616 1297 aa18.78■□□□□ 0.6
VSX1-207ENST00000557285 IGFBP4P22692 258 aa18.78■□□□□ 0.6
VSX1-207ENST00000557285 NEK4P51957 841 aa18.78■□□□□ 0.6
VSX1-207ENST00000557285 PLCB4Q15147 1175 aa18.78■□□□□ 0.6
VSX1-207ENST00000557285 ANKRD1Q15327 319 aa18.78■□□□□ 0.6
VSX1-207ENST00000557285 BLIDQ8IZY5 108 aa18.78■□□□□ 0.6
VSX1-207ENST00000557285 DBF4BQ8NFT6 615 aa18.78■□□□□ 0.6
VSX1-207ENST00000557285 TBCKQ8TEA7 893 aa18.78■□□□□ 0.6
VSX1-207ENST00000557285 DNAJB3Q8WWF6 145 aa18.78■□□□□ 0.6
VSX1-207ENST00000557285 PPM1EQ8WY54 764 aa18.78■□□□□ 0.6
VSX1-207ENST00000557285 GAS2L1Q99501 681 aaPredicted RBP18.78■□□□□ 0.6
VSX1-207ENST00000557285 CHD7Q9P2D1 2997 aa18.78■□□□□ 0.6
VSX1-207ENST00000557285 UNC80Q8N2C7 3258 aa18.77■□□□□ 0.6
VSX1-207ENST00000557285 ABHD14A-ACY1A0A1B0GW23 586 aa18.77■□□□□ 0.6
VSX1-207ENST00000557285 POTEB3A0JP26 581 aa18.77■□□□□ 0.6
VSX1-207ENST00000557285 KIF28PB7ZC32 967 aa18.77■□□□□ 0.6
VSX1-207ENST00000557285 DHX15O43143 795 aaKnown RBP18.77■□□□□ 0.6
VSX1-207ENST00000557285 LARGE1O95461 756 aa18.77■□□□□ 0.6
VSX1-207ENST00000557285 MARCH8Q5T0T0 291 aa18.77■□□□□ 0.6
VSX1-207ENST00000557285 FAM160B1Q5W0V3 765 aa18.77■□□□□ 0.6
VSX1-207ENST00000557285 MIS18BP1Q6P0N0 1132 aa18.77■□□□□ 0.6
VSX1-207ENST00000557285 PDXDC2PQ6P474 469 aa18.77■□□□□ 0.6
VSX1-207ENST00000557285 POTEBQ6S5H4 581 aa18.77■□□□□ 0.6
VSX1-207ENST00000557285 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.77■□□□□ 0.6
VSX1-207ENST00000557285 CCDC60Q8IWA6 550 aaPredicted RBP18.77■□□□□ 0.6
VSX1-207ENST00000557285 CKAP2LQ8IYA6 745 aa18.77■□□□□ 0.6
VSX1-207ENST00000557285 PHOSPHO2Q8TCD6 241 aa18.77■□□□□ 0.6
VSX1-207ENST00000557285 GJA10Q969M2 543 aa18.77■□□□□ 0.6
VSX1-207ENST00000557285 GJB4Q9NTQ9 266 aa18.77■□□□□ 0.6
VSX1-207ENST00000557285 SAMM50Q9Y512 469 aa18.77■□□□□ 0.6
VSX1-207ENST00000557285 MICAL3Q7RTP6 2002 aa18.77■□□□□ 0.6
VSX1-207ENST00000557285 MYH9P35579 1960 aaKnown RBP18.76■□□□□ 0.59
VSX1-207ENST00000557285 EIF5BO60841 1220 aaKnown RBP18.76■□□□□ 0.59
VSX1-207ENST00000557285 CAND2O75155 1236 aa18.76■□□□□ 0.59
VSX1-207ENST00000557285 ARHGEF15O94989 841 aa18.76■□□□□ 0.59
VSX1-207ENST00000557285 GHRP10912 638 aa18.76■□□□□ 0.59
VSX1-207ENST00000557285 FOSBP53539 338 aa18.76■□□□□ 0.59
VSX1-207ENST00000557285 TMEM62Q0P6H9 643 aa18.76■□□□□ 0.59
VSX1-207ENST00000557285 SWSAP1Q6NVH7 229 aa18.76■□□□□ 0.59
VSX1-207ENST00000557285 TAF2Q6P1X5 1199 aa18.76■□□□□ 0.59
VSX1-207ENST00000557285 ABHD15Q6UXT9 468 aa18.76■□□□□ 0.59
VSX1-207ENST00000557285 PLPPR4Q7Z2D5 763 aa18.76■□□□□ 0.59
VSX1-207ENST00000557285 RSPH3Q86UC2 560 aa18.76■□□□□ 0.59
VSX1-207ENST00000557285 MYOCDQ8IZQ8 938 aa18.76■□□□□ 0.59
VSX1-207ENST00000557285 SEPT8Q92599 483 aa18.76■□□□□ 0.59
VSX1-207ENST00000557285 ZNF302Q9NR11 478 aa18.76■□□□□ 0.59
VSX1-207ENST00000557285 SIP14410 1827 aa18.76■□□□□ 0.59
VSX1-207ENST00000557285 LCHNA4D1U4 455 aa18.75■□□□□ 0.59
VSX1-207ENST00000557285 RRN3P2A6NIE6 340 aa18.75■□□□□ 0.59
VSX1-207ENST00000557285 CHMP2AO43633 222 aa18.75■□□□□ 0.59
VSX1-207ENST00000557285 ATG7O95352 703 aa18.75■□□□□ 0.59
VSX1-207ENST00000557285 CTDNEP1O95476 244 aa18.75■□□□□ 0.59
VSX1-207ENST00000557285 TDP2O95551 362 aa18.75■□□□□ 0.59
VSX1-207ENST00000557285 CHRNA1P02708 482 aa18.75■□□□□ 0.59
VSX1-207ENST00000557285 CIITAP33076 1130 aa18.75■□□□□ 0.59
VSX1-207ENST00000557285 ME3Q16798 604 aa18.75■□□□□ 0.59
VSX1-207ENST00000557285 PLEKHG4Q58EX7 1191 aa18.75■□□□□ 0.59
VSX1-207ENST00000557285 LENG9Q96B70 501 aa18.75■□□□□ 0.59
VSX1-207ENST00000557285 TBC1D22BQ9NU19 505 aa18.75■□□□□ 0.59
VSX1-207ENST00000557285 ORC3Q9UBD5 711 aaPredicted RBP18.75■□□□□ 0.59
VSX1-207ENST00000557285 MBLAC1A4D2B0 266 aaPredicted RBP18.74■□□□□ 0.59
VSX1-207ENST00000557285 RFXAPO00287 272 aa18.74■□□□□ 0.59
VSX1-207ENST00000557285 MSH4O15457 936 aa18.74■□□□□ 0.59
VSX1-207ENST00000557285 EDIL3O43854 480 aa18.74■□□□□ 0.59
VSX1-207ENST00000557285 EFCAB14O75071 495 aa18.74■□□□□ 0.59
VSX1-207ENST00000557285 ADGRE1Q14246 886 aa18.74■□□□□ 0.59
VSX1-207ENST00000557285 NPY5RQ15761 445 aa18.74■□□□□ 0.59
VSX1-207ENST00000557285 ZNF746Q6NUN9 644 aaPredicted RBP18.74■□□□□ 0.59
VSX1-207ENST00000557285 SPRED2Q7Z698 418 aa18.74■□□□□ 0.59
VSX1-207ENST00000557285 MICALL1Q8N3F8 863 aa18.74■□□□□ 0.59
VSX1-207ENST00000557285 ARNTL2Q8WYA1 636 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms