RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 SH3RF1Q7Z6J0 888 aa23.58■■□□□ 1.37
SEC23A-213ENST00000557280 CTAGE1Q96RT6 745 aa23.58■■□□□ 1.37
SEC23A-213ENST00000557280 SMARCAD1Q9H4L7 1026 aa23.58■■□□□ 1.37
SEC23A-213ENST00000557280 AZI2Q9H6S1 392 aa23.58■■□□□ 1.37
SEC23A-213ENST00000557280 TTC12Q9H892 705 aaPredicted RBP23.58■■□□□ 1.37
SEC23A-213ENST00000557280 ZNF302Q9NR11 478 aa23.58■■□□□ 1.37
SEC23A-213ENST00000557280 PDLIM7Q9NR12 457 aa23.58■■□□□ 1.37
SEC23A-213ENST00000557280 ERAP1Q9NZ08 941 aa23.58■■□□□ 1.37
SEC23A-213ENST00000557280 GABBR1Q9UBS5 961 aa23.58■■□□□ 1.37
SEC23A-213ENST00000557280 GTF2IRD1Q9UHL9 959 aa23.58■■□□□ 1.37
SEC23A-213ENST00000557280 IGSF9BQ9UPX0 1349 aa23.58■■□□□ 1.36
SEC23A-213ENST00000557280 BAG4O95429 457 aaKnown RBP23.57■■□□□ 1.36
SEC23A-213ENST00000557280 CD4P01730 458 aa23.57■■□□□ 1.36
SEC23A-213ENST00000557280 PLCB4Q15147 1175 aa23.57■■□□□ 1.36
SEC23A-213ENST00000557280 SESTD1Q86VW0 696 aa23.57■■□□□ 1.36
SEC23A-213ENST00000557280 C7orf31Q8N865 590 aa23.57■■□□□ 1.36
SEC23A-213ENST00000557280 AFAP1L1Q8TED9 768 aa23.57■■□□□ 1.36
SEC23A-213ENST00000557280 POTEMA6NI47 508 aa23.56■■□□□ 1.36
SEC23A-213ENST00000557280 ZSCAN22P10073 491 aaPredicted RBP23.56■■□□□ 1.36
SEC23A-213ENST00000557280 SFNP31947 248 aa23.56■■□□□ 1.36
SEC23A-213ENST00000557280 PLPPR4Q7Z2D5 763 aa23.56■■□□□ 1.36
SEC23A-213ENST00000557280 TOX2Q96NM4 488 aa23.56■■□□□ 1.36
SEC23A-213ENST00000557280 ZMYND8Q9ULU4 1186 aaPredicted RBP23.56■■□□□ 1.36
SEC23A-213ENST00000557280 PCDHA12Q9UN75 941 aa23.56■■□□□ 1.36
SEC23A-213ENST00000557280 ZDHHC9Q9Y397 364 aa23.56■■□□□ 1.36
SEC23A-213ENST00000557280 MAFBQ9Y5Q3 323 aaPredicted RBP23.56■■□□□ 1.36
SEC23A-213ENST00000557280 MROH7Q68CQ1 1323 aa23.56■■□□□ 1.36
SEC23A-213ENST00000557280 ZNF862O60290 1169 aa23.55■■□□□ 1.36
SEC23A-213ENST00000557280 CLTBP09497 229 aa23.55■■□□□ 1.36
SEC23A-213ENST00000557280 SYN1P17600 705 aa23.55■■□□□ 1.36
SEC23A-213ENST00000557280 HOXC8P31273 242 aa23.55■■□□□ 1.36
SEC23A-213ENST00000557280 ATP2C1P98194 919 aaPredicted RBP23.55■■□□□ 1.36
SEC23A-213ENST00000557280 IL17AQ16552 155 aa23.55■■□□□ 1.36
SEC23A-213ENST00000557280 FAM160B1Q5W0V3 765 aa23.55■■□□□ 1.36
SEC23A-213ENST00000557280 PDXDC2PQ6P474 469 aa23.55■■□□□ 1.36
SEC23A-213ENST00000557280 BANK1Q8NDB2 785 aa23.55■■□□□ 1.36
SEC23A-213ENST00000557280 RDM1Q8NG50 284 aa23.55■■□□□ 1.36
SEC23A-213ENST00000557280 PRDM5Q9NQX1 630 aaPredicted RBP23.55■■□□□ 1.36
SEC23A-213ENST00000557280 SETD4Q9NVD3 440 aa23.55■■□□□ 1.36
SEC23A-213ENST00000557280 WRAP73Q9P2S5 460 aaPredicted RBP23.55■■□□□ 1.36
SEC23A-213ENST00000557280 CLIC4Q9Y696 253 aa23.55■■□□□ 1.36
SEC23A-213ENST00000557280 TRIM43BA6NCK2 446 aa23.54■■□□□ 1.36
SEC23A-213ENST00000557280 DCDC2CA8MYV0 355 aa23.54■■□□□ 1.36
SEC23A-213ENST00000557280 RBAK-RBAKDNI3L0D1 243 aa23.54■■□□□ 1.36
SEC23A-213ENST00000557280 F13A1P00488 732 aa23.54■■□□□ 1.36
SEC23A-213ENST00000557280 CYP2C9P11712 490 aa23.54■■□□□ 1.36
SEC23A-213ENST00000557280 TECP42680 631 aa23.54■■□□□ 1.36
SEC23A-213ENST00000557280 PTPN11Q06124 597 aaPredicted RBP23.54■■□□□ 1.36
SEC23A-213ENST00000557280 TRMT1LQ7Z2T5 733 aaKnown RBP23.54■■□□□ 1.36
SEC23A-213ENST00000557280 LMBR1Q8WVP7 490 aa23.54■■□□□ 1.36
SEC23A-213ENST00000557280 TRIM43Q96BQ3 446 aaPredicted RBP23.54■■□□□ 1.36
SEC23A-213ENST00000557280 ZBTB10Q96DT7 871 aa23.54■■□□□ 1.36
SEC23A-213ENST00000557280 ZSCAN16Q9H4T2 348 aaPredicted RBP23.54■■□□□ 1.36
SEC23A-213ENST00000557280 TBX21Q9UL17 535 aa23.54■■□□□ 1.36
SEC23A-213ENST00000557280 WDR81Q562E7 1941 aa23.54■■□□□ 1.36
SEC23A-213ENST00000557280 ITGB8P26012 769 aa23.53■■□□□ 1.36
SEC23A-213ENST00000557280 PRKCEQ02156 737 aa23.53■■□□□ 1.36
SEC23A-213ENST00000557280 SF3A1Q15459 793 aaKnown RBP23.53■■□□□ 1.36
SEC23A-213ENST00000557280 PTGISQ16647 500 aa23.53■■□□□ 1.36
SEC23A-213ENST00000557280 TRAPPC12Q8WVT3 735 aa23.53■■□□□ 1.36
SEC23A-213ENST00000557280 WNT8BQ93098 351 aa23.53■■□□□ 1.36
SEC23A-213ENST00000557280 SEZ6LQ9BYH1 1024 aa23.53■■□□□ 1.36
SEC23A-213ENST00000557280 TSHZ2Q9NRE2 1034 aa23.53■■□□□ 1.36
SEC23A-213ENST00000557280 RGL1Q9NZL6 768 aa23.53■■□□□ 1.36
SEC23A-213ENST00000557280 TRPC6Q9Y210 931 aa23.53■■□□□ 1.36
SEC23A-213ENST00000557280 MYH15Q9Y2K3 1946 aa23.53■■□□□ 1.36
SEC23A-213ENST00000557280 POTEB3A0JP26 581 aa23.52■■□□□ 1.36
SEC23A-213ENST00000557280 C17orf102A2RUQ5 167 aa23.52■■□□□ 1.36
SEC23A-213ENST00000557280 CYP4A11Q02928 519 aa23.52■■□□□ 1.36
SEC23A-213ENST00000557280 PPFIA1Q13136 1202 aa23.52■■□□□ 1.36
SEC23A-213ENST00000557280 GRIK4Q16099 956 aa23.52■■□□□ 1.36
SEC23A-213ENST00000557280 FOXD4L6Q3SYB3 417 aaPredicted RBP23.52■■□□□ 1.36
SEC23A-213ENST00000557280 POTEBQ6S5H4 581 aa23.52■■□□□ 1.36
SEC23A-213ENST00000557280 FOXD4L3Q6VB84 417 aaPredicted RBP23.52■■□□□ 1.36
SEC23A-213ENST00000557280 ATP8B4Q8TF62 1192 aa23.52■■□□□ 1.36
SEC23A-213ENST00000557280 DHX38Q92620 1227 aaKnown RBP23.52■■□□□ 1.36
SEC23A-213ENST00000557280 DYDC2Q96IM9 177 aa23.52■■□□□ 1.36
SEC23A-213ENST00000557280 UMODL1Q5DID0 1318 aa23.52■■□□□ 1.36
SEC23A-213ENST00000557280 TMEM150BA6NC51 233 aa23.51■■□□□ 1.35
SEC23A-213ENST00000557280 ZBTB42B2RXF5 422 aa23.51■■□□□ 1.35
SEC23A-213ENST00000557280 TLR3O15455 904 aaKnown RBP23.51■■□□□ 1.35
SEC23A-213ENST00000557280 STBD1O95210 358 aa23.51■■□□□ 1.35
SEC23A-213ENST00000557280 BRD1O95696 1058 aa23.51■■□□□ 1.35
SEC23A-213ENST00000557280 INSRRP14616 1297 aa23.51■■□□□ 1.35
SEC23A-213ENST00000557280 DDIT3P35638 169 aa23.51■■□□□ 1.35
SEC23A-213ENST00000557280 ANP32AP39687 249 aaKnown RBP23.51■■□□□ 1.35
SEC23A-213ENST00000557280 SLC26A2P50443 739 aa23.51■■□□□ 1.35
SEC23A-213ENST00000557280 IGBP1P78318 339 aa23.51■■□□□ 1.35
SEC23A-213ENST00000557280 ADAM17P78536 824 aa23.51■■□□□ 1.35
SEC23A-213ENST00000557280 CEBPZQ03701 1054 aaKnown RBP23.51■■□□□ 1.35
SEC23A-213ENST00000557280 EPHA7Q15375 998 aa23.51■■□□□ 1.35
SEC23A-213ENST00000557280 CKAP2LQ8IYA6 745 aa23.51■■□□□ 1.35
SEC23A-213ENST00000557280 USP28Q96RU2 1077 aa23.51■■□□□ 1.35
SEC23A-213ENST00000557280 EIF2AK1Q9BQI3 630 aaKnown RBP23.51■■□□□ 1.35
SEC23A-213ENST00000557280 TMEM39AQ9NV64 488 aa23.51■■□□□ 1.35
SEC23A-213ENST00000557280 LTBP2Q14767 1821 aa23.5■■□□□ 1.35
SEC23A-213ENST00000557280 H0YGN5 161 aa23.5■■□□□ 1.35
SEC23A-213ENST00000557280 LAD1O00515 517 aa23.5■■□□□ 1.35
SEC23A-213ENST00000557280 TREHO43280 583 aa23.5■■□□□ 1.35
SEC23A-213ENST00000557280 OATP04181 439 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms