RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 NECTIN4Q96NY8 510 aa14.65□□□□□ -0.06
PSEN1-220ENST00000557037 TMEM47Q9BQJ4 181 aa14.65□□□□□ -0.06
PSEN1-220ENST00000557037 NACAP1Q9BZK3 213 aa14.65□□□□□ -0.06
PSEN1-220ENST00000557037 CPVLQ9H3G5 476 aa14.65□□□□□ -0.06
PSEN1-220ENST00000557037 BCAS3Q9H6U6 928 aa14.65□□□□□ -0.06
PSEN1-220ENST00000557037 MLXIPQ9HAP2 919 aa14.65□□□□□ -0.06
PSEN1-220ENST00000557037 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.65□□□□□ -0.06
PSEN1-220ENST00000557037 CACNA1IQ9P0X4 2223 aa14.65□□□□□ -0.06
PSEN1-220ENST00000557037 HIDE1A8MVS5 230 aa14.64□□□□□ -0.07
PSEN1-220ENST00000557037 RNF113AO15541 343 aaKnown RBP14.64□□□□□ -0.07
PSEN1-220ENST00000557037 FGF18O76093 207 aa14.64□□□□□ -0.07
PSEN1-220ENST00000557037 RLBP1P12271 317 aa14.64□□□□□ -0.07
PSEN1-220ENST00000557037 UBA1P22314 1058 aaKnown RBP14.64□□□□□ -0.07
PSEN1-220ENST00000557037 CD52P31358 61 aa14.64□□□□□ -0.07
PSEN1-220ENST00000557037 TRIM50Q86XT4 487 aa14.64□□□□□ -0.07
PSEN1-220ENST00000557037 FTSJ3Q8IY81 847 aaKnown RBP14.64□□□□□ -0.07
PSEN1-220ENST00000557037 THNSL1Q8IYQ7 743 aa14.64□□□□□ -0.07
PSEN1-220ENST00000557037 ZDHHC14Q8IZN3 488 aa14.64□□□□□ -0.07
PSEN1-220ENST00000557037 CRIPAKQ8N1N5 446 aa14.64□□□□□ -0.07
PSEN1-220ENST00000557037 NAPBQ9H115 298 aa14.64□□□□□ -0.07
PSEN1-220ENST00000557037 ADAM7Q9H2U9 754 aa14.64□□□□□ -0.07
PSEN1-220ENST00000557037 AGO3Q9H9G7 860 aaKnown RBP14.64□□□□□ -0.07
PSEN1-220ENST00000557037 PXMP2Q9NR77 195 aa14.64□□□□□ -0.07
PSEN1-220ENST00000557037 HCSTQ9UBK5 93 aa14.64□□□□□ -0.07
PSEN1-220ENST00000557037 CNOT1A5YKK6 2376 aaKnown RBP14.63□□□□□ -0.07
PSEN1-220ENST00000557037 TOP1P11387 765 aaKnown RBP14.63□□□□□ -0.07
PSEN1-220ENST00000557037 MGAT3Q09327 533 aa14.63□□□□□ -0.07
PSEN1-220ENST00000557037 ACAP1Q15027 740 aa14.63□□□□□ -0.07
PSEN1-220ENST00000557037 TPRNQ4KMQ1 711 aa14.63□□□□□ -0.07
PSEN1-220ENST00000557037 FBXO47Q5MNV8 452 aa14.63□□□□□ -0.07
PSEN1-220ENST00000557037 ZC3H14Q6PJT7 736 aaKnown RBP14.63□□□□□ -0.07
PSEN1-220ENST00000557037 ENTPD7Q9NQZ7 604 aa14.63□□□□□ -0.07
PSEN1-220ENST00000557037 CCDC171Q6TFL3 1326 aa14.63□□□□□ -0.07
PSEN1-220ENST00000557037 KAT6AQ92794 2004 aa14.63□□□□□ -0.07
PSEN1-220ENST00000557037 ADRB1P08588 477 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 SP9P0CG40 484 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 GOLGA8HP0CJ92 632 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 STAG3L1P0CL83 205 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 PDHBP11177 359 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 SDHBP21912 280 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 RFX1P22670 979 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 MTHFRP42898 656 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 NOVP48745 357 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 ADAM17P78536 824 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 ZNF543Q08ER8 600 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 COL9A3Q14050 684 aaPredicted RBP14.62□□□□□ -0.07
PSEN1-220ENST00000557037 SPECC1Q5M775 1068 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 RARS2Q5T160 578 aaKnown RBP14.62□□□□□ -0.07
PSEN1-220ENST00000557037 UTP14CQ5TAP6 766 aaKnown RBP14.62□□□□□ -0.07
PSEN1-220ENST00000557037 PDE12Q6L8Q7 609 aaKnown RBP14.62□□□□□ -0.07
PSEN1-220ENST00000557037 KANK3Q6NY19 840 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 TSHZ1Q6ZSZ6 1077 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 C12orf76Q8N812 135 aaPredicted RBP14.62□□□□□ -0.07
PSEN1-220ENST00000557037 SUMF1Q8NBK3 374 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 RASGRP4Q8TDF6 673 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 TCF25Q9BQ70 676 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 UBA5Q9GZZ9 404 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 AAASQ9NRG9 546 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 NCDNQ9UBB6 729 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 CDV3Q9UKY7 258 aaKnown RBP14.62□□□□□ -0.07
PSEN1-220ENST00000557037 LRFN2Q9ULH4 789 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 CDY2AQ9Y6F7 541 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 ABCB11O95342 1321 aa14.62□□□□□ -0.07
PSEN1-220ENST00000557037 NOP56O00567 594 aaKnown RBP14.61□□□□□ -0.07
PSEN1-220ENST00000557037 SCG2P13521 617 aa14.61□□□□□ -0.07
PSEN1-220ENST00000557037 ITIH3Q06033 890 aa14.61□□□□□ -0.07
PSEN1-220ENST00000557037 TDGQ13569 410 aa14.61□□□□□ -0.07
PSEN1-220ENST00000557037 CDC37Q16543 378 aaPredicted RBP14.61□□□□□ -0.07
PSEN1-220ENST00000557037 MCF2L2Q86YR7 1114 aa14.61□□□□□ -0.07
PSEN1-220ENST00000557037 KBTBD3Q8NAB2 608 aa14.61□□□□□ -0.07
PSEN1-220ENST00000557037 COLGALT1Q8NBJ5 622 aa14.61□□□□□ -0.07
PSEN1-220ENST00000557037 CASP10Q92851 521 aa14.61□□□□□ -0.07
PSEN1-220ENST00000557037 SEC62Q99442 399 aaKnown RBP14.61□□□□□ -0.07
PSEN1-220ENST00000557037 DBR1Q9UK59 544 aaKnown RBP14.61□□□□□ -0.07
PSEN1-220ENST00000557037 FANCMQ8IYD8 2048 aa14.61□□□□□ -0.07
PSEN1-220ENST00000557037 TBKBP1A7MCY6 615 aa14.6□□□□□ -0.07
PSEN1-220ENST00000557037 CFBP00751 764 aa14.6□□□□□ -0.07
PSEN1-220ENST00000557037 HSPD1P10809 573 aaKnown RBP14.6□□□□□ -0.07
PSEN1-220ENST00000557037 KCNV1Q6PIU1 500 aa14.6□□□□□ -0.07
PSEN1-220ENST00000557037 PLCD3Q8N3E9 789 aa14.6□□□□□ -0.07
PSEN1-220ENST00000557037 IL31RAQ8NI17 732 aa14.6□□□□□ -0.07
PSEN1-220ENST00000557037 DNAJB3Q8WWF6 145 aa14.6□□□□□ -0.07
PSEN1-220ENST00000557037 CYP26B1Q9NR63 512 aa14.6□□□□□ -0.07
PSEN1-220ENST00000557037 SH2B1Q9NRF2 756 aaPredicted RBP14.6□□□□□ -0.07
PSEN1-220ENST00000557037 TOMM22Q9NS69 142 aa14.6□□□□□ -0.07
PSEN1-220ENST00000557037 TELO2Q9Y4R8 837 aa14.6□□□□□ -0.07
PSEN1-220ENST00000557037 FLNBO75369 2602 aaKnown RBP14.6□□□□□ -0.07
PSEN1-220ENST00000557037 NARSO43776 548 aaKnown RBP14.59□□□□□ -0.07
PSEN1-220ENST00000557037 RRP12Q5JTH9 1297 aaKnown RBP14.59□□□□□ -0.07
PSEN1-220ENST00000557037 VARS2Q5ST30 1063 aaKnown RBP14.59□□□□□ -0.07
PSEN1-220ENST00000557037 RSPH3Q86UC2 560 aa14.59□□□□□ -0.07
PSEN1-220ENST00000557037 FEZF2Q8TBJ5 459 aa14.59□□□□□ -0.07
PSEN1-220ENST00000557037 PDCD2LQ9BRP1 358 aa14.59□□□□□ -0.07
PSEN1-220ENST00000557037 USP26Q9BXU7 913 aa14.59□□□□□ -0.07
PSEN1-220ENST00000557037 DUSP12Q9UNI6 340 aa14.59□□□□□ -0.07
PSEN1-220ENST00000557037 HCFC2Q9Y5Z7 792 aa14.59□□□□□ -0.07
PSEN1-220ENST00000557037 RAB11FIP3O75154 756 aa14.58□□□□□ -0.08
PSEN1-220ENST00000557037 EOMESO95936 686 aa14.58□□□□□ -0.08
PSEN1-220ENST00000557037 DCNP07585 359 aaKnown RBP14.58□□□□□ -0.08
PSEN1-220ENST00000557037 CFHP08603 1231 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms