RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 SFNP31947 248 aa12.08□□□□□ -0.48
LINC00239-201ENST00000556973 CCL23P55773 120 aa12.08□□□□□ -0.48
LINC00239-201ENST00000556973 ZNF200P98182 395 aaPredicted RBP12.08□□□□□ -0.48
LINC00239-201ENST00000556973 HIC1Q14526 733 aa12.08□□□□□ -0.48
LINC00239-201ENST00000556973 LRCH2Q5VUJ6 765 aa12.08□□□□□ -0.48
LINC00239-201ENST00000556973 SWSAP1Q6NVH7 229 aa12.08□□□□□ -0.48
LINC00239-201ENST00000556973 ETNPPLQ8TBG4 499 aa12.08□□□□□ -0.48
LINC00239-201ENST00000556973 ZNF302Q9NR11 478 aa12.08□□□□□ -0.48
LINC00239-201ENST00000556973 SETD4Q9NVD3 440 aa12.08□□□□□ -0.48
LINC00239-201ENST00000556973 SAMM50Q9Y512 469 aa12.08□□□□□ -0.48
LINC00239-201ENST00000556973 UMODL1Q5DID0 1318 aa12.08□□□□□ -0.48
LINC00239-201ENST00000556973 BACH1O14867 736 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 TREHO43280 583 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 SLC37A4O43826 429 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 MARCH6O60337 910 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 PARNO95453 639 aaKnown RBP12.07□□□□□ -0.48
LINC00239-201ENST00000556973 IQCF3P0C7M6 154 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 MARK3P27448 753 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 GJB2P29033 226 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 RFC2P35250 354 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 JAK3P52333 1124 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 ADAM17P78536 824 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 RBL2Q08999 1139 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 SHHQ15465 462 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 PDXDC2PQ6P474 469 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 SERINC5Q86VE9 423 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 SLFN12Q8IYM2 578 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 RDM1Q8NG50 284 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 DHX38Q92620 1227 aaKnown RBP12.07□□□□□ -0.48
LINC00239-201ENST00000556973 WNT8AQ9H1J5 351 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 KCNMB3Q9NPA1 279 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 IL23AQ9NPF7 189 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 DISC1Q9NRI5 854 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 SMC3Q9UQE7 1217 aa12.07□□□□□ -0.48
LINC00239-201ENST00000556973 MAFBQ9Y5Q3 323 aaPredicted RBP12.07□□□□□ -0.48
LINC00239-201ENST00000556973 POTEB3A0JP26 581 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 FAM205CA6NFA0 338 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 HBP1O60381 514 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 PFKMP08237 780 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 CKBP12277 381 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 INSRRP14616 1297 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 SELPP16109 830 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 U2AF2P26368 475 aaKnown RBP eCLIP12.06□□□□□ -0.48
LINC00239-201ENST00000556973 EPHB4P54760 987 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 PPFIA1Q13136 1202 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 CUL4AQ13619 759 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 GNL2Q13823 731 aaKnown RBP12.06□□□□□ -0.48
LINC00239-201ENST00000556973 PLCB4Q15147 1175 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 GRIK4Q16099 956 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 TRIM71Q2Q1W2 868 aaKnown RBP12.06□□□□□ -0.48
LINC00239-201ENST00000556973 POTEBQ6S5H4 581 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 B3GNT9Q6UX72 402 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 C16orf59Q7L2K0 433 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 CCDC60Q8IWA6 550 aaPredicted RBP12.06□□□□□ -0.48
LINC00239-201ENST00000556973 LMBR1Q8WVP7 490 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 GJA10Q969M2 543 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 SCLYQ96I15 445 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 UNC45AQ9H3U1 944 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 GABBR1Q9UBS5 961 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 TRPC6Q9Y210 931 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 TANC1Q9C0D5 1861 aa12.06□□□□□ -0.48
LINC00239-201ENST00000556973 SCN5AQ14524 2016 aa12.05□□□□□ -0.48
LINC00239-201ENST00000556973 MBLAC1A4D2B0 266 aaPredicted RBP12.05□□□□□ -0.48
LINC00239-201ENST00000556973 CAND2O75155 1236 aa12.05□□□□□ -0.48
LINC00239-201ENST00000556973 FGBP02675 491 aa12.05□□□□□ -0.48
LINC00239-201ENST00000556973 ATP4AP20648 1035 aa12.05□□□□□ -0.48
LINC00239-201ENST00000556973 THPOP40225 353 aa12.05□□□□□ -0.48
LINC00239-201ENST00000556973 PPP2R5CQ13362 524 aa12.05□□□□□ -0.48
LINC00239-201ENST00000556973 LRIT3Q3SXY7 679 aa12.05□□□□□ -0.48
LINC00239-201ENST00000556973 TMEM240Q5SV17 173 aa12.05□□□□□ -0.48
LINC00239-201ENST00000556973 C9orf50Q5SZB4 431 aa12.05□□□□□ -0.48
LINC00239-201ENST00000556973 MARCH8Q5T0T0 291 aa12.05□□□□□ -0.48
LINC00239-201ENST00000556973 PSRC1Q6PGN9 363 aaPredicted RBP12.05□□□□□ -0.48
LINC00239-201ENST00000556973 ZNF365Q70YC5 407 aa12.05□□□□□ -0.48
LINC00239-201ENST00000556973 LRRC8DQ7L1W4 858 aa12.05□□□□□ -0.48
LINC00239-201ENST00000556973 MIER3Q7Z3K6 550 aa12.05□□□□□ -0.48
LINC00239-201ENST00000556973 NOSTRINQ8IVI9 506 aa12.05□□□□□ -0.48
LINC00239-201ENST00000556973 CKAP2LQ8IYA6 745 aa12.05□□□□□ -0.48
LINC00239-201ENST00000556973 ATP8B4Q8TF62 1192 aa12.05□□□□□ -0.48
LINC00239-201ENST00000556973 BBXQ8WY36 941 aaPredicted RBP12.05□□□□□ -0.48
LINC00239-201ENST00000556973 HAS1Q92839 578 aa12.05□□□□□ -0.48
LINC00239-201ENST00000556973 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.05□□□□□ -0.48
LINC00239-201ENST00000556973 NRBP2Q9NSY0 501 aa12.05□□□□□ -0.48
LINC00239-201ENST00000556973 COL1A2P08123 1366 aa12.05□□□□□ -0.48
LINC00239-201ENST00000556973 H3BQV1 296 aa12.04□□□□□ -0.48
LINC00239-201ENST00000556973 CHMP2AO43633 222 aa12.04□□□□□ -0.48
LINC00239-201ENST00000556973 NEMFO60524 1076 aa12.04□□□□□ -0.48
LINC00239-201ENST00000556973 RPLP2P05387 115 aaKnown RBP12.04□□□□□ -0.48
LINC00239-201ENST00000556973 ACRP10323 421 aa12.04□□□□□ -0.48
LINC00239-201ENST00000556973 TRAPPC10P48553 1259 aa12.04□□□□□ -0.48
LINC00239-201ENST00000556973 IGBP1P78318 339 aa12.04□□□□□ -0.48
LINC00239-201ENST00000556973 ORC2Q13416 577 aaPredicted RBP12.04□□□□□ -0.48
LINC00239-201ENST00000556973 ZNF484Q5JVG2 852 aa12.04□□□□□ -0.48
LINC00239-201ENST00000556973 ZNF618Q5T7W0 954 aa12.04□□□□□ -0.48
LINC00239-201ENST00000556973 LARP1BQ659C4 914 aaKnown RBP12.04□□□□□ -0.48
LINC00239-201ENST00000556973 TAF2Q6P1X5 1199 aa12.04□□□□□ -0.48
LINC00239-201ENST00000556973 DEFB128Q7Z7B8 93 aa12.04□□□□□ -0.48
LINC00239-201ENST00000556973 RPAINQ86UA6 219 aa12.04□□□□□ -0.48
LINC00239-201ENST00000556973 RSPH3Q86UC2 560 aa12.04□□□□□ -0.48
LINC00239-201ENST00000556973 POTEDQ86YR6 584 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms