RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 EIF2AK1Q9BQI3 630 aaKnown RBP10.92□□□□□ -0.66
TMEM260-213ENST00000556929 CCSER1Q9C0I3 900 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 NT5C3AQ9H0P0 336 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 AZI2Q9H6S1 392 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 BCAS3Q9H6U6 928 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 TUFT1Q9NNX1 390 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 XPNPEP3Q9NQH7 507 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 METRNQ9UJH8 293 aa10.92□□□□□ -0.66
TMEM260-213ENST00000556929 GSTTP1A0A1W2PQM5 241 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 A6NJR5 290 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 DDX11L8A8MPP1 907 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 EML1O00423 815 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 BACH1O14867 736 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 ZEB2O60315 1214 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 PPFIA4O75335 1185 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 P4HBP07237 508 aaKnown RBP10.91□□□□□ -0.66
TMEM260-213ENST00000556929 MMP3P08254 477 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 C6orf222P0C671 652 aaPredicted RBP10.91□□□□□ -0.66
TMEM260-213ENST00000556929 SUPT20HL2P0C7V6 817 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 CCL5P13501 91 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 CMA1P23946 247 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 RPA1P27694 616 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 CCT6AP40227 531 aaKnown RBP10.91□□□□□ -0.66
TMEM260-213ENST00000556929 UBE2HP62256 183 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 DGKDQ16760 1214 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 TPRNQ4KMQ1 711 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 SPECC1Q5M775 1068 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 RESP18Q5W5W9 173 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 SHC4Q6S5L8 630 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 RNF180Q86T96 592 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 KCTD17Q8N5Z5 321 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 AFG1LQ8WV93 481 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 SLC39A7Q92504 469 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 MRPS27Q92552 414 aaKnown RBP10.91□□□□□ -0.66
TMEM260-213ENST00000556929 SYMPKQ92797 1274 aaKnown RBP10.91□□□□□ -0.66
TMEM260-213ENST00000556929 ATP6V0A1Q93050 837 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 DYDC2Q96IM9 177 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 PYM1Q9BRP8 204 aaKnown RBP10.91□□□□□ -0.66
TMEM260-213ENST00000556929 POLR3CQ9BUI4 534 aaPredicted RBP10.91□□□□□ -0.66
TMEM260-213ENST00000556929 UNC93B1Q9H1C4 597 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 UPF3AQ9H1J1 476 aaKnown RBP10.91□□□□□ -0.66
TMEM260-213ENST00000556929 ZNF302Q9NR11 478 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 ARID2Q68CP9 1835 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 KAT6AQ92794 2004 aa10.91□□□□□ -0.66
TMEM260-213ENST00000556929 EMSYQ7Z589 1322 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 SYNRGQ9UMZ2 1314 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 IGKV6D-21A0A0A0MT36 114 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 PP2D1A8MPX8 630 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 KPNA6O60684 536 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 SLITRK3O94933 977 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 PYGBP11216 843 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 CDC25AP30304 524 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 MCM4P33991 863 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 QARSP47897 775 aaKnown RBP10.9□□□□□ -0.66
TMEM260-213ENST00000556929 STAT5BP51692 787 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 PSMC5P62195 406 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 NKX3-2P78367 333 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 ZRSR1Q15695 479 aaKnown RBP10.9□□□□□ -0.66
TMEM260-213ENST00000556929 FSCN1Q16658 493 aaKnown RBP10.9□□□□□ -0.66
TMEM260-213ENST00000556929 UTP14CQ5TAP6 766 aaKnown RBP10.9□□□□□ -0.66
TMEM260-213ENST00000556929 SWSAP1Q6NVH7 229 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 CCDC73Q6ZRK6 1079 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 PLPPR4Q7Z2D5 763 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 CATSPER3Q86XQ3 398 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 TPH2Q8IWU9 490 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 FSIP1Q8NA03 581 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 PCSK9Q8NBP7 692 aaKnown RBP10.9□□□□□ -0.66
TMEM260-213ENST00000556929 ARRDC4Q8NCT1 418 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 BANK1Q8NDB2 785 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 GLG1Q92896 1179 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 LENG1Q96BZ8 264 aaPredicted RBP10.9□□□□□ -0.66
TMEM260-213ENST00000556929 ARMC5Q96C12 935 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 EPSTI1Q96J88 318 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 ZNF333Q96JL9 665 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 MCOLN1Q9GZU1 580 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 RNF208Q9H0X6 261 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 SMARCAD1Q9H4L7 1026 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 ZSWIM4Q9H7M6 989 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 LMBRD1Q9NUN5 540 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 GABBR1Q9UBS5 961 aa10.9□□□□□ -0.66
TMEM260-213ENST00000556929 ZNF215Q9UL58 517 aaPredicted RBP10.9□□□□□ -0.66
TMEM260-213ENST00000556929 A0A1B0GVL5 298 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 TTLL13PA6NNM8 815 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 ADAMTS4O75173 837 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 GADD45BO75293 160 aaPredicted RBP10.89□□□□□ -0.67
TMEM260-213ENST00000556929 MED24O75448 989 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 LGR5O75473 907 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 PGK1P00558 417 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 LGALS2P05162 132 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 MYL3P08590 195 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 CAPN2P17655 700 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 SLC26A2P50443 739 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 CYP4A11Q02928 519 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 CTTNQ14247 550 aaKnown RBP10.89□□□□□ -0.67
TMEM260-213ENST00000556929 MTFR1Q15390 333 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 GNASQ5JWF2 1037 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 HYIQ5T013 277 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 RRAGBQ5VZM2 374 aa10.89□□□□□ -0.67
TMEM260-213ENST00000556929 CCDC60Q8IWA6 550 aaPredicted RBP10.89□□□□□ -0.67
TMEM260-213ENST00000556929 C4orf19Q8IY42 314 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms