RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 TRPC6Q9Y210 931 aa16.95■□□□□ 0.3
CHD8-211ENST00000556833 PCDHA8Q9Y5H6 950 aa16.95■□□□□ 0.3
CHD8-211ENST00000556833 SLC12A7Q9Y666 1083 aa16.95■□□□□ 0.3
CHD8-211ENST00000556833 TTC3P53804 2025 aa16.95■□□□□ 0.3
CHD8-211ENST00000556833 PI4K2BG5E9Z4 385 aa16.94■□□□□ 0.3
CHD8-211ENST00000556833 GNAQP50148 359 aa16.94■□□□□ 0.3
CHD8-211ENST00000556833 BTG3Q14201 252 aaPredicted RBP16.94■□□□□ 0.3
CHD8-211ENST00000556833 FBXO47Q5MNV8 452 aa16.94■□□□□ 0.3
CHD8-211ENST00000556833 RSPH3Q86UC2 560 aa16.94■□□□□ 0.3
CHD8-211ENST00000556833 GIMAP8Q8ND71 665 aaPredicted RBP16.94■□□□□ 0.3
CHD8-211ENST00000556833 CYP2W1Q8TAV3 490 aa16.94■□□□□ 0.3
CHD8-211ENST00000556833 NEK9Q8TD19 979 aa16.94■□□□□ 0.3
CHD8-211ENST00000556833 LINC01599Q8WXQ3 324 aa16.94■□□□□ 0.3
CHD8-211ENST00000556833 PCYT2Q99447 389 aa16.94■□□□□ 0.3
CHD8-211ENST00000556833 MAP3K14Q99558 947 aa16.94■□□□□ 0.3
CHD8-211ENST00000556833 LZTS2Q9BRK4 669 aa16.94■□□□□ 0.3
CHD8-211ENST00000556833 EHMT1Q9H9B1 1298 aa16.94■□□□□ 0.3
CHD8-211ENST00000556833 AGO3Q9H9G7 860 aaKnown RBP16.94■□□□□ 0.3
CHD8-211ENST00000556833 ANO2Q9NQ90 1003 aa16.94■□□□□ 0.3
CHD8-211ENST00000556833 UBIAD1Q9Y5Z9 338 aa16.94■□□□□ 0.3
CHD8-211ENST00000556833 MUC6Q6W4X9 2439 aa16.94■□□□□ 0.3
CHD8-211ENST00000556833 EVPLQ92817 2033 aa16.93■□□□□ 0.3
CHD8-211ENST00000556833 DDX39AO00148 427 aaKnown RBP16.93■□□□□ 0.3
CHD8-211ENST00000556833 ENPP3O14638 875 aa16.93■□□□□ 0.3
CHD8-211ENST00000556833 INSRRP14616 1297 aa16.93■□□□□ 0.3
CHD8-211ENST00000556833 GATMP50440 423 aa16.93■□□□□ 0.3
CHD8-211ENST00000556833 MRPS6P82932 125 aaKnown RBP16.93■□□□□ 0.3
CHD8-211ENST00000556833 CREB3L3Q68CJ9 461 aa16.93■□□□□ 0.3
CHD8-211ENST00000556833 WWC2Q6AWC2 1192 aa16.93■□□□□ 0.3
CHD8-211ENST00000556833 TAF2Q6P1X5 1199 aa16.93■□□□□ 0.3
CHD8-211ENST00000556833 TMTC3Q6ZXV5 915 aa16.93■□□□□ 0.3
CHD8-211ENST00000556833 PABPC5Q96DU9 382 aaKnown RBP16.93■□□□□ 0.3
CHD8-211ENST00000556833 TMEM87BQ96K49 555 aa16.93■□□□□ 0.3
CHD8-211ENST00000556833 SMARCAD1Q9H4L7 1026 aa16.93■□□□□ 0.3
CHD8-211ENST00000556833 JPH1Q9HDC5 661 aaPredicted RBP16.93■□□□□ 0.3
CHD8-211ENST00000556833 ALG13Q9NP73 1137 aaKnown RBP16.93■□□□□ 0.3
CHD8-211ENST00000556833 PLXNA4Q9HCM2 1894 aa16.93■□□□□ 0.3
CHD8-211ENST00000556833 LINC01565O15544 149 aa16.92■□□□□ 0.3
CHD8-211ENST00000556833 GPR37L1O60883 481 aa16.92■□□□□ 0.3
CHD8-211ENST00000556833 LINC00271P0C7V0 271 aa16.92■□□□□ 0.3
CHD8-211ENST00000556833 BMPR1AP36894 532 aa16.92■□□□□ 0.3
CHD8-211ENST00000556833 DLX2Q07687 328 aaPredicted RBP16.92■□□□□ 0.3
CHD8-211ENST00000556833 TSHZ1Q6ZSZ6 1077 aa16.92■□□□□ 0.3
CHD8-211ENST00000556833 CDHR1Q96JP9 859 aa16.92■□□□□ 0.3
CHD8-211ENST00000556833 PPP1R16BQ96T49 567 aa16.92■□□□□ 0.3
CHD8-211ENST00000556833 ESYT1Q9BSJ8 1104 aa16.92■□□□□ 0.3
CHD8-211ENST00000556833 JADE2Q9NQC1 790 aa16.92■□□□□ 0.3
CHD8-211ENST00000556833 TMEM260Q9NX78 707 aa16.92■□□□□ 0.3
CHD8-211ENST00000556833 GINS2Q9Y248 185 aa16.92■□□□□ 0.3
CHD8-211ENST00000556833 CNTNAP5Q8WYK1 1306 aa16.92■□□□□ 0.3
CHD8-211ENST00000556833 MBLAC1A4D2B0 266 aaPredicted RBP16.91■□□□□ 0.3
CHD8-211ENST00000556833 CALM1P0DP23 149 aa16.91■□□□□ 0.3
CHD8-211ENST00000556833 CALM2P0DP24 149 aa16.91■□□□□ 0.3
CHD8-211ENST00000556833 CALM3P0DP25 149 aa16.91■□□□□ 0.3
CHD8-211ENST00000556833 ARP10275 920 aa16.91■□□□□ 0.3
CHD8-211ENST00000556833 SMARCA1P28370 1054 aa16.91■□□□□ 0.3
CHD8-211ENST00000556833 NAPAP54920 295 aa16.91■□□□□ 0.3
CHD8-211ENST00000556833 HYAL1Q12794 435 aa16.91■□□□□ 0.3
CHD8-211ENST00000556833 TMEM266Q2M3C6 531 aa16.91■□□□□ 0.3
CHD8-211ENST00000556833 TYW1BQ6NUM6 668 aa16.91■□□□□ 0.3
CHD8-211ENST00000556833 FANCBQ8NB91 859 aa16.91■□□□□ 0.3
CHD8-211ENST00000556833 C11orf84Q9BUA3 381 aaPredicted RBP16.91■□□□□ 0.3
CHD8-211ENST00000556833 AZI2Q9H6S1 392 aa16.91■□□□□ 0.3
CHD8-211ENST00000556833 RC3H2Q9HBD1 1191 aaKnown RBP16.91■□□□□ 0.3
CHD8-211ENST00000556833 KCNH7Q9NS40 1196 aa16.91■□□□□ 0.3
CHD8-211ENST00000556833 SLC9A2Q9UBY0 812 aa16.91■□□□□ 0.3
CHD8-211ENST00000556833 NAP1L2Q9ULW6 460 aaPredicted RBP16.91■□□□□ 0.3
CHD8-211ENST00000556833 MRPL42Q9Y6G3 142 aaKnown RBP16.91■□□□□ 0.3
CHD8-211ENST00000556833 LTBRP36941 435 aa16.9■□□□□ 0.3
CHD8-211ENST00000556833 ACTR2P61160 394 aa16.9■□□□□ 0.3
CHD8-211ENST00000556833 PLCB4Q15147 1175 aa16.9■□□□□ 0.3
CHD8-211ENST00000556833 TRMT1LQ7Z2T5 733 aaKnown RBP16.9■□□□□ 0.3
CHD8-211ENST00000556833 TMTC2Q8N394 836 aa16.9■□□□□ 0.3
CHD8-211ENST00000556833 PCDHGC5Q9Y5F6 944 aa16.9■□□□□ 0.3
CHD8-211ENST00000556833 TRPV2Q9Y5S1 764 aa16.9■□□□□ 0.3
CHD8-211ENST00000556833 M0QZ92 97 aa16.89■□□□□ 0.29
CHD8-211ENST00000556833 TBX10O75333 385 aa16.89■□□□□ 0.29
CHD8-211ENST00000556833 LIFRP42702 1097 aa16.89■□□□□ 0.29
CHD8-211ENST00000556833 ZP2Q05996 745 aa16.89■□□□□ 0.29
CHD8-211ENST00000556833 ITGB3BPQ13352 177 aaPredicted RBP16.89■□□□□ 0.29
CHD8-211ENST00000556833 CSPP1Q1MSJ5 1256 aa16.89■□□□□ 0.29
CHD8-211ENST00000556833 RTN4RL1Q86UN2 441 aaPredicted RBP16.89■□□□□ 0.29
CHD8-211ENST00000556833 MXRA8Q9BRK3 442 aa16.89■□□□□ 0.29
CHD8-211ENST00000556833 SDF4Q9BRK5 362 aa16.89■□□□□ 0.29
CHD8-211ENST00000556833 POTEB3A0JP26 581 aa16.88■□□□□ 0.29
CHD8-211ENST00000556833 C5orf67F2Z3F1 127 aa16.88■□□□□ 0.29
CHD8-211ENST00000556833 PPFIA3O75145 1194 aa16.88■□□□□ 0.29
CHD8-211ENST00000556833 DGKIO75912 1065 aa16.88■□□□□ 0.29
CHD8-211ENST00000556833 DNAJB1P25685 340 aa16.88■□□□□ 0.29
CHD8-211ENST00000556833 ADCY7P51828 1080 aa16.88■□□□□ 0.29
CHD8-211ENST00000556833 PAK2Q13177 524 aa16.88■□□□□ 0.29
CHD8-211ENST00000556833 NECTIN1Q15223 517 aa16.88■□□□□ 0.29
CHD8-211ENST00000556833 PUS10Q3MIT2 529 aaKnown RBP16.88■□□□□ 0.29
CHD8-211ENST00000556833 IER5Q5VY09 327 aa16.88■□□□□ 0.29
CHD8-211ENST00000556833 POTEBQ6S5H4 581 aa16.88■□□□□ 0.29
CHD8-211ENST00000556833 SYNE3Q6ZMZ3 975 aa16.88■□□□□ 0.29
CHD8-211ENST00000556833 ADGRD2Q7Z7M1 963 aa16.88■□□□□ 0.29
CHD8-211ENST00000556833 ZNF689Q96CS4 500 aaPredicted RBP16.88■□□□□ 0.29
CHD8-211ENST00000556833 ANO3Q9BYT9 981 aa16.88■□□□□ 0.29
CHD8-211ENST00000556833 BRPF3Q9ULD4 1205 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms