RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 EML1O00423 815 aa19.71■□□□□ 0.75
SHMT2-225ENST00000556798 CLTBP09497 229 aa19.71■□□□□ 0.75
SHMT2-225ENST00000556798 OR52Z1P0C646 297 aa19.71■□□□□ 0.75
SHMT2-225ENST00000556798 SMIM10L2AP0DMW4 78 aa19.71■□□□□ 0.75
SHMT2-225ENST00000556798 SMIM10L2BP0DMW5 78 aa19.71■□□□□ 0.75
SHMT2-225ENST00000556798 SYN1P17600 705 aa19.71■□□□□ 0.75
SHMT2-225ENST00000556798 SFNP31947 248 aa19.71■□□□□ 0.75
SHMT2-225ENST00000556798 JAK3P52333 1124 aa19.71■□□□□ 0.75
SHMT2-225ENST00000556798 PPP2R5CQ13362 524 aa19.71■□□□□ 0.75
SHMT2-225ENST00000556798 ORC2Q13416 577 aaPredicted RBP19.71■□□□□ 0.75
SHMT2-225ENST00000556798 HIC1Q14526 733 aa19.71■□□□□ 0.75
SHMT2-225ENST00000556798 FAM160B1Q5W0V3 765 aa19.71■□□□□ 0.75
SHMT2-225ENST00000556798 NCAPH2Q6IBW4 605 aa19.71■□□□□ 0.75
SHMT2-225ENST00000556798 GDF6Q6KF10 455 aaPredicted RBP19.71■□□□□ 0.75
SHMT2-225ENST00000556798 TOX2Q96NM4 488 aa19.71■□□□□ 0.75
SHMT2-225ENST00000556798 GABBR1Q9UBS5 961 aa19.71■□□□□ 0.75
SHMT2-225ENST00000556798 GTF2IRD1Q9UHL9 959 aa19.71■□□□□ 0.75
SHMT2-225ENST00000556798 TANC1Q9C0D5 1861 aa19.71■□□□□ 0.75
SHMT2-225ENST00000556798 ARID2Q68CP9 1835 aa19.7■□□□□ 0.74
SHMT2-225ENST00000556798 EVPLQ92817 2033 aa19.7■□□□□ 0.74
SHMT2-225ENST00000556798 TLR3O15455 904 aaKnown RBP19.7■□□□□ 0.74
SHMT2-225ENST00000556798 CD4P01730 458 aa19.7■□□□□ 0.74
SHMT2-225ENST00000556798 ZNF200P98182 395 aaPredicted RBP19.7■□□□□ 0.74
SHMT2-225ENST00000556798 PTPN11Q06124 597 aaPredicted RBP19.7■□□□□ 0.74
SHMT2-225ENST00000556798 SPIRE1Q08AE8 756 aa19.7■□□□□ 0.74
SHMT2-225ENST00000556798 PKP1Q13835 747 aa19.7■□□□□ 0.74
SHMT2-225ENST00000556798 UGCGQ16739 394 aa19.7■□□□□ 0.74
SHMT2-225ENST00000556798 PDXDC2PQ6P474 469 aa19.7■□□□□ 0.74
SHMT2-225ENST00000556798 FAM173BQ6P4H8 233 aa19.7■□□□□ 0.74
SHMT2-225ENST00000556798 PLPPR4Q7Z2D5 763 aa19.7■□□□□ 0.74
SHMT2-225ENST00000556798 SESTD1Q86VW0 696 aa19.7■□□□□ 0.74
SHMT2-225ENST00000556798 AFAP1L1Q8TED9 768 aa19.7■□□□□ 0.74
SHMT2-225ENST00000556798 SEZ6LQ9BYH1 1024 aa19.7■□□□□ 0.74
SHMT2-225ENST00000556798 TTC12Q9H892 705 aaPredicted RBP19.7■□□□□ 0.74
SHMT2-225ENST00000556798 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.7■□□□□ 0.74
SHMT2-225ENST00000556798 NR2E3Q9Y5X4 410 aa19.7■□□□□ 0.74
SHMT2-225ENST00000556798 IGSF9BQ9UPX0 1349 aa19.7■□□□□ 0.74
SHMT2-225ENST00000556798 PTGDRQ13258 359 aa19.69■□□□□ 0.74
SHMT2-225ENST00000556798 PLCB4Q15147 1175 aa19.69■□□□□ 0.74
SHMT2-225ENST00000556798 PTGISQ16647 500 aa19.69■□□□□ 0.74
SHMT2-225ENST00000556798 TRMT1LQ7Z2T5 733 aaKnown RBP19.69■□□□□ 0.74
SHMT2-225ENST00000556798 C4orf32Q8N8J7 132 aa19.69■□□□□ 0.74
SHMT2-225ENST00000556798 TMEM39AQ9NV64 488 aa19.69■□□□□ 0.74
SHMT2-225ENST00000556798 SETD4Q9NVD3 440 aa19.69■□□□□ 0.74
SHMT2-225ENST00000556798 PCDHA12Q9UN75 941 aa19.69■□□□□ 0.74
SHMT2-225ENST00000556798 TRPC6Q9Y210 931 aa19.69■□□□□ 0.74
SHMT2-225ENST00000556798 SCN5AQ14524 2016 aa19.68■□□□□ 0.74
SHMT2-225ENST00000556798 C17orf102A2RUQ5 167 aa19.68■□□□□ 0.74
SHMT2-225ENST00000556798 TRIM43BA6NCK2 446 aa19.68■□□□□ 0.74
SHMT2-225ENST00000556798 POTEMA6NI47 508 aa19.68■□□□□ 0.74
SHMT2-225ENST00000556798 H0YGN5 161 aa19.68■□□□□ 0.74
SHMT2-225ENST00000556798 CYP2C9P11712 490 aa19.68■□□□□ 0.74
SHMT2-225ENST00000556798 ATP4AP20648 1035 aa19.68■□□□□ 0.74
SHMT2-225ENST00000556798 PPFIA1Q13136 1202 aa19.68■□□□□ 0.74
SHMT2-225ENST00000556798 CKAP2LQ8IYA6 745 aa19.68■□□□□ 0.74
SHMT2-225ENST00000556798 BANK1Q8NDB2 785 aa19.68■□□□□ 0.74
SHMT2-225ENST00000556798 RDM1Q8NG50 284 aa19.68■□□□□ 0.74
SHMT2-225ENST00000556798 LMBR1Q8WVP7 490 aa19.68■□□□□ 0.74
SHMT2-225ENST00000556798 TRIM43Q96BQ3 446 aaPredicted RBP19.68■□□□□ 0.74
SHMT2-225ENST00000556798 CTAGE1Q96RT6 745 aa19.68■□□□□ 0.74
SHMT2-225ENST00000556798 TBX21Q9UL17 535 aa19.68■□□□□ 0.74
SHMT2-225ENST00000556798 NOD1Q9Y239 953 aa19.68■□□□□ 0.74
SHMT2-225ENST00000556798 MAFBQ9Y5Q3 323 aaPredicted RBP19.68■□□□□ 0.74
SHMT2-225ENST00000556798 POTEB3A0JP26 581 aa19.67■□□□□ 0.74
SHMT2-225ENST00000556798 TECP42680 631 aa19.67■□□□□ 0.74
SHMT2-225ENST00000556798 IGBP1P78318 339 aa19.67■□□□□ 0.74
SHMT2-225ENST00000556798 POTEBQ6S5H4 581 aa19.67■□□□□ 0.74
SHMT2-225ENST00000556798 PPP1R12CQ9BZL4 782 aa19.67■□□□□ 0.74
SHMT2-225ENST00000556798 FTOQ9C0B1 505 aaKnown RBP eCLIP19.67■□□□□ 0.74
SHMT2-225ENST00000556798 PRKAG2Q9UGJ0 569 aa19.67■□□□□ 0.74
SHMT2-225ENST00000556798 ZNF862O60290 1169 aa19.66■□□□□ 0.74
SHMT2-225ENST00000556798 ZSCAN22P10073 491 aaPredicted RBP19.66■□□□□ 0.74
SHMT2-225ENST00000556798 INSRRP14616 1297 aa19.66■□□□□ 0.74
SHMT2-225ENST00000556798 ITGB8P26012 769 aa19.66■□□□□ 0.74
SHMT2-225ENST00000556798 HOXC8P31273 242 aa19.66■□□□□ 0.74
SHMT2-225ENST00000556798 SLC26A2P50443 739 aa19.66■□□□□ 0.74
SHMT2-225ENST00000556798 PRKCEQ02156 737 aa19.66■□□□□ 0.74
SHMT2-225ENST00000556798 GRIK4Q16099 956 aa19.66■□□□□ 0.74
SHMT2-225ENST00000556798 ATP8B4Q8TF62 1192 aa19.66■□□□□ 0.74
SHMT2-225ENST00000556798 TRAPPC12Q8WVT3 735 aa19.66■□□□□ 0.74
SHMT2-225ENST00000556798 ATP6V0A1Q93050 837 aa19.66■□□□□ 0.74
SHMT2-225ENST00000556798 ZBTB10Q96DT7 871 aa19.66■□□□□ 0.74
SHMT2-225ENST00000556798 UMODL1Q5DID0 1318 aa19.66■□□□□ 0.74
SHMT2-225ENST00000556798 LOXHD1Q8IVV2 1947 aa19.66■□□□□ 0.74
SHMT2-225ENST00000556798 SIP14410 1827 aa19.65■□□□□ 0.74
SHMT2-225ENST00000556798 KIAA0355O15063 1070 aa19.65■□□□□ 0.74
SHMT2-225ENST00000556798 TREHO43280 583 aa19.65■□□□□ 0.74
SHMT2-225ENST00000556798 CYP4A11Q02928 519 aa19.65■□□□□ 0.74
SHMT2-225ENST00000556798 EPHA7Q15375 998 aa19.65■□□□□ 0.74
SHMT2-225ENST00000556798 WNT8BQ93098 351 aa19.65■□□□□ 0.74
SHMT2-225ENST00000556798 ZSCAN16Q9H4T2 348 aaPredicted RBP19.65■□□□□ 0.74
SHMT2-225ENST00000556798 RGL1Q9NZL6 768 aa19.65■□□□□ 0.74
SHMT2-225ENST00000556798 TCHHQ07283 1943 aa19.64■□□□□ 0.74
SHMT2-225ENST00000556798 TMEM150BA6NC51 233 aa19.64■□□□□ 0.73
SHMT2-225ENST00000556798 F13A1P00488 732 aa19.64■□□□□ 0.73
SHMT2-225ENST00000556798 OATP04181 439 aa19.64■□□□□ 0.73
SHMT2-225ENST00000556798 RAG1P15918 1043 aa19.64■□□□□ 0.73
SHMT2-225ENST00000556798 ATP2C1P98194 919 aaPredicted RBP19.64■□□□□ 0.73
SHMT2-225ENST00000556798 CTTNQ14247 550 aaKnown RBP19.64■□□□□ 0.73
SHMT2-225ENST00000556798 SF3A1Q15459 793 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms