RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ARHGEF15O94989 841 aa11.75□□□□□ -0.53
SHMT2-224ENST00000556737 CTDNEP1O95476 244 aa11.75□□□□□ -0.53
SHMT2-224ENST00000556737 THPOP40225 353 aa11.75□□□□□ -0.53
SHMT2-224ENST00000556737 DEFB103AP81534 67 aa11.75□□□□□ -0.53
SHMT2-224ENST00000556737 SETQ01105 290 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-224ENST00000556737 SSRP1Q08945 709 aaKnown RBP11.75□□□□□ -0.53
SHMT2-224ENST00000556737 PPFIA1Q13136 1202 aa11.75□□□□□ -0.53
SHMT2-224ENST00000556737 GRIK4Q16099 956 aa11.75□□□□□ -0.53
SHMT2-224ENST00000556737 HERC6Q8IVU3 1022 aa11.75□□□□□ -0.53
SHMT2-224ENST00000556737 TRIM22Q8IYM9 498 aa11.75□□□□□ -0.53
SHMT2-224ENST00000556737 BICD2Q8TD16 824 aa11.75□□□□□ -0.53
SHMT2-224ENST00000556737 SMARCAD1Q9H4L7 1026 aa11.75□□□□□ -0.53
SHMT2-224ENST00000556737 PCDHA4Q9UN74 947 aa11.75□□□□□ -0.53
SHMT2-224ENST00000556737 PCDHA11Q9Y5I1 949 aa11.75□□□□□ -0.53
SHMT2-224ENST00000556737 RSPH10B2B2RC85 870 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 DDX39AO00148 427 aaKnown RBP11.74□□□□□ -0.53
SHMT2-224ENST00000556737 IPO5O00410 1097 aaKnown RBP11.74□□□□□ -0.53
SHMT2-224ENST00000556737 CPLX1O14810 134 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 EIF5BO60841 1220 aaKnown RBP11.74□□□□□ -0.53
SHMT2-224ENST00000556737 CTSHP09668 335 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 RSPH10BP0C881 870 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 GNAT1P11488 350 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 FOSL2P15408 326 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 ZNF76P36508 570 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 NLRP5P59047 1200 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 MGAT3Q09327 533 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 ST3GAL1Q11201 340 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 PLCB4Q15147 1175 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 FAM26DQ5JW98 314 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 ABHD15Q6UXT9 468 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 TMCO2Q7Z6W1 182 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-224ENST00000556737 RPAINQ86UA6 219 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 CCDC60Q8IWA6 550 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-224ENST00000556737 FAM177A1Q8N128 213 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-224ENST00000556737 PHOSPHO2Q8TCD6 241 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 GLG1Q92896 1179 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 ZBTB10Q96DT7 871 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 UIMC1Q96RL1 719 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 SLKQ9H2G2 1235 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-224ENST00000556737 MSRAQ9UJ68 235 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 TUBE1Q9UJT0 475 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 KAT6AQ92794 2004 aa11.74□□□□□ -0.53
SHMT2-224ENST00000556737 REV3LO60673 3130 aa11.73□□□□□ -0.53
SHMT2-224ENST00000556737 CA3P07451 260 aa11.73□□□□□ -0.53
SHMT2-224ENST00000556737 INSRRP14616 1297 aa11.73□□□□□ -0.53
SHMT2-224ENST00000556737 ME3Q16798 604 aa11.73□□□□□ -0.53
SHMT2-224ENST00000556737 PRR16Q569H4 304 aa11.73□□□□□ -0.53
SHMT2-224ENST00000556737 PLEKHG4Q58EX7 1191 aa11.73□□□□□ -0.53
SHMT2-224ENST00000556737 CPLX2Q6PUV4 134 aaKnown RBP11.73□□□□□ -0.53
SHMT2-224ENST00000556737 PLPPR4Q7Z2D5 763 aa11.73□□□□□ -0.53
SHMT2-224ENST00000556737 BLIDQ8IZY5 108 aa11.73□□□□□ -0.53
SHMT2-224ENST00000556737 GTF3C6Q969F1 213 aa11.73□□□□□ -0.53
SHMT2-224ENST00000556737 ZNF577Q9BSK1 485 aa11.73□□□□□ -0.53
SHMT2-224ENST00000556737 PHF20Q9BVI0 1012 aa11.73□□□□□ -0.53
SHMT2-224ENST00000556737 PRDM12Q9H4Q4 367 aa11.73□□□□□ -0.53
SHMT2-224ENST00000556737 TSHZ2Q9NRE2 1034 aa11.73□□□□□ -0.53
SHMT2-224ENST00000556737 IGSF9BQ9UPX0 1349 aa11.73□□□□□ -0.53
SHMT2-224ENST00000556737 ABHD14A-ACY1A0A1B0GW23 586 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 ZBTB42B2RXF5 422 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 MSH4O15457 936 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 CDKL5O76039 1030 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 TDP2O95551 362 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 CHRNA1P02708 482 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 FDPSP14324 419 aaKnown RBP11.72□□□□□ -0.53
SHMT2-224ENST00000556737 ATP4AP20648 1035 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 KCNJ6P48051 423 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 STAT5BP51692 787 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 ADGRE1Q14246 886 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 ANKRD1Q15327 319 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 PPP2R2DQ66LE6 453 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 TAF2Q6P1X5 1199 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 SPRED2Q7Z698 418 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 DBF4BQ8NFT6 615 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 MAFAQ8NHW3 353 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-224ENST00000556737 TBCKQ8TEA7 893 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 TRAPPC12Q8WVT3 735 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 MBOAT7Q96N66 472 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 AZI2Q9H6S1 392 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 SLC28A3Q9HAS3 691 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 GJB4Q9NTQ9 266 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 KCNJ14Q9UNX9 436 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 TRPC6Q9Y210 931 aa11.72□□□□□ -0.53
SHMT2-224ENST00000556737 LOXHD1Q8IVV2 1947 aa11.71□□□□□ -0.53
SHMT2-224ENST00000556737 LCHNA4D1U4 455 aa11.71□□□□□ -0.53
SHMT2-224ENST00000556737 EPOPA6NHQ4 379 aa11.71□□□□□ -0.53
SHMT2-224ENST00000556737 GJB5O95377 273 aa11.71□□□□□ -0.53
SHMT2-224ENST00000556737 SLC26A2P50443 739 aa11.71□□□□□ -0.53
SHMT2-224ENST00000556737 USP11P51784 963 aa11.71□□□□□ -0.53
SHMT2-224ENST00000556737 IGBP1P78318 339 aa11.71□□□□□ -0.53
SHMT2-224ENST00000556737 IKBKEQ14164 716 aa11.71□□□□□ -0.53
SHMT2-224ENST00000556737 GALNT17Q6IS24 598 aa11.71□□□□□ -0.53
SHMT2-224ENST00000556737 ZNF746Q6NUN9 644 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-224ENST00000556737 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.71□□□□□ -0.534e-7■□□□□ 9.3
SHMT2-224ENST00000556737 NECAB1Q8N987 351 aa11.71□□□□□ -0.53
SHMT2-224ENST00000556737 USP38Q8NB14 1042 aa11.71□□□□□ -0.53
SHMT2-224ENST00000556737 SLC5A5Q92911 643 aa11.71□□□□□ -0.53
SHMT2-224ENST00000556737 TBC1D22BQ9NU19 505 aa11.71□□□□□ -0.53
SHMT2-224ENST00000556737 MYH9P35579 1960 aaKnown RBP11.7□□□□□ -0.54
SHMT2-224ENST00000556737 COL1A2P08123 1366 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 CYP3A7-CYP3A51PA0A087WV96 503 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms