RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 PIP4K2CQ8TBX8 421 aa6.15□□□□□ -1.42
PRPF39-210ENST00000556718 PHOSPHO1Q8TCT1 267 aa6.15□□□□□ -1.42
PRPF39-210ENST00000556718 LRRC37BQ96QE4 947 aa6.15□□□□□ -1.42
PRPF39-210ENST00000556718 SUSD5O60279 629 aa6.14□□□□□ -1.43
PRPF39-210ENST00000556718 MSCO60682 206 aa6.14□□□□□ -1.43
PRPF39-210ENST00000556718 KNG1P01042 644 aa6.14□□□□□ -1.43
PRPF39-210ENST00000556718 FOXE3Q13461 319 aa6.14□□□□□ -1.43
PRPF39-210ENST00000556718 FHL2Q14192 279 aa6.14□□□□□ -1.43
PRPF39-210ENST00000556718 SMAD2Q15796 467 aaKnown RBP6.14□□□□□ -1.43
PRPF39-210ENST00000556718 SLC35F1Q5T1Q4 408 aa6.14□□□□□ -1.43
PRPF39-210ENST00000556718 VASNQ6EMK4 673 aa6.14□□□□□ -1.43
PRPF39-210ENST00000556718 MRM1Q6IN84 353 aaKnown RBP6.14□□□□□ -1.43
PRPF39-210ENST00000556718 EEPD1Q7L9B9 569 aa6.14□□□□□ -1.43
PRPF39-210ENST00000556718 ST13P5Q8NFI4 369 aaPredicted RBP6.14□□□□□ -1.43
PRPF39-210ENST00000556718 ZNF669Q96BR6 464 aaPredicted RBP6.14□□□□□ -1.43
PRPF39-210ENST00000556718 SEC61A2Q9H9S3 476 aa6.14□□□□□ -1.43
PRPF39-210ENST00000556718 DLL4Q9NR61 685 aa6.14□□□□□ -1.43
PRPF39-210ENST00000556718 FANCLQ9NW38 375 aa6.14□□□□□ -1.43
PRPF39-210ENST00000556718 PTPN22Q9Y2R2 807 aa6.14□□□□□ -1.43
PRPF39-210ENST00000556718 NPFFR2Q9Y5X5 522 aa6.14□□□□□ -1.43
PRPF39-210ENST00000556718 SLC4A7Q9Y6M7 1214 aa6.14□□□□□ -1.43
PRPF39-210ENST00000556718 hCG_2014768A0A024R1R8 64 aa6.13□□□□□ -1.43
PRPF39-210ENST00000556718 LTFP02788 710 aa6.13□□□□□ -1.43
PRPF39-210ENST00000556718 CAPNS1P04632 268 aa6.13□□□□□ -1.43
PRPF39-210ENST00000556718 CKMP06732 381 aa6.13□□□□□ -1.43
PRPF39-210ENST00000556718 GRIA2P42262 883 aa6.13□□□□□ -1.43
PRPF39-210ENST00000556718 GLRBP48167 497 aa6.13□□□□□ -1.43
PRPF39-210ENST00000556718 PTPROQ16827 1216 aa6.13□□□□□ -1.43
PRPF39-210ENST00000556718 PLEKHG4Q58EX7 1191 aa6.13□□□□□ -1.43
PRPF39-210ENST00000556718 MICAL1Q8TDZ2 1067 aa6.13□□□□□ -1.43
PRPF39-210ENST00000556718 THAP3Q8WTV1 239 aaPredicted RBP6.13□□□□□ -1.43
PRPF39-210ENST00000556718 AJUBAQ96IF1 538 aa6.13□□□□□ -1.43
PRPF39-210ENST00000556718 CCDC140Q96MF4 163 aa6.13□□□□□ -1.43
PRPF39-210ENST00000556718 LMF1Q96S06 567 aa6.13□□□□□ -1.43
PRPF39-210ENST00000556718 ADOQ96SZ5 270 aa6.13□□□□□ -1.43
PRPF39-210ENST00000556718 SLC6A20Q9NP91 592 aa6.13□□□□□ -1.43
PRPF39-210ENST00000556718 ZFP69BQ9UJL9 534 aa6.13□□□□□ -1.43
PRPF39-210ENST00000556718 ZFR2Q9UPR6 939 aaKnown RBP6.13□□□□□ -1.43
PRPF39-210ENST00000556718 PRKAB1Q9Y478 270 aa6.13□□□□□ -1.43
PRPF39-210ENST00000556718 IGBP1P78318 339 aa6.12□□□□□ -1.43
PRPF39-210ENST00000556718 SSRP1Q08945 709 aaKnown RBP6.12□□□□□ -1.43
PRPF39-210ENST00000556718 PRKD1Q15139 912 aaPredicted RBP6.12□□□□□ -1.43
PRPF39-210ENST00000556718 SKIDA1Q1XH10 827 aa6.12□□□□□ -1.43
PRPF39-210ENST00000556718 NRN1LQ496H8 165 aa6.12□□□□□ -1.43
PRPF39-210ENST00000556718 C2orf27AQ580R0 203 aa6.12□□□□□ -1.43
PRPF39-210ENST00000556718 MIIPQ5JXC2 388 aa6.12□□□□□ -1.43
PRPF39-210ENST00000556718 RNF207Q6ZRF8 634 aa6.12□□□□□ -1.43
PRPF39-210ENST00000556718 LILRB2Q8N423 598 aa6.12□□□□□ -1.43
PRPF39-210ENST00000556718 STPG3Q8N7X2 389 aa6.12□□□□□ -1.43
PRPF39-210ENST00000556718 GIMAP8Q8ND71 665 aaPredicted RBP6.12□□□□□ -1.43
PRPF39-210ENST00000556718 TTLL11Q8NHH1 800 aa6.12□□□□□ -1.43
PRPF39-210ENST00000556718 KDM2BQ8NHM5 1336 aa6.12□□□□□ -1.43
PRPF39-210ENST00000556718 ZNF503Q96F45 646 aa6.12□□□□□ -1.43
PRPF39-210ENST00000556718 IQCA1LA6NCM1 817 aa6.11□□□□□ -1.43
PRPF39-210ENST00000556718 KRIT1O00522 736 aa6.11□□□□□ -1.43
PRPF39-210ENST00000556718 PLSCR1O15162 318 aa6.11□□□□□ -1.43
PRPF39-210ENST00000556718 DNAJC6O75061 913 aa6.11□□□□□ -1.43
PRPF39-210ENST00000556718 ZNF888P0CJ79 500 aaPredicted RBP6.11□□□□□ -1.43
PRPF39-210ENST00000556718 ANAPC15P60006 121 aa6.11□□□□□ -1.43
PRPF39-210ENST00000556718 CYP4F22Q6NT55 531 aa6.11□□□□□ -1.43
PRPF39-210ENST00000556718 C16orf86Q6ZW13 317 aa6.11□□□□□ -1.43
PRPF39-210ENST00000556718 FILIP1Q7Z7B0 1213 aa6.11□□□□□ -1.43
PRPF39-210ENST00000556718 TAX1BP1Q86VP1 789 aa6.11□□□□□ -1.43
PRPF39-210ENST00000556718 TRIM48Q8IWZ4 208 aa6.11□□□□□ -1.43
PRPF39-210ENST00000556718 BRINP2Q9C0B6 783 aa6.11□□□□□ -1.43
PRPF39-210ENST00000556718 EPN3Q9H201 632 aa6.11□□□□□ -1.43
PRPF39-210ENST00000556718 SPC25Q9HBM1 224 aa6.11□□□□□ -1.43
PRPF39-210ENST00000556718 KCND1Q9NSA2 647 aa6.11□□□□□ -1.43
PRPF39-210ENST00000556718 PFDN2Q9UHV9 154 aa6.11□□□□□ -1.43
PRPF39-210ENST00000556718 TELO2Q9Y4R8 837 aa6.11□□□□□ -1.43
PRPF39-210ENST00000556718 ESYT3A0FGR9 886 aa6.1□□□□□ -1.43
PRPF39-210ENST00000556718 AGRPO00253 132 aa6.1□□□□□ -1.43
PRPF39-210ENST00000556718 MAFKO60675 156 aa6.1□□□□□ -1.43
PRPF39-210ENST00000556718 FBXO21O94952 628 aa6.1□□□□□ -1.43
PRPF39-210ENST00000556718 IL18BPO95998 194 aa6.1□□□□□ -1.43
PRPF39-210ENST00000556718 COL6A2P12110 1019 aa6.1□□□□□ -1.43
PRPF39-210ENST00000556718 DGCR2P98153 550 aa6.1□□□□□ -1.43
PRPF39-210ENST00000556718 TUSC3Q13454 348 aa6.1□□□□□ -1.43
PRPF39-210ENST00000556718 PAN2Q504Q3 1202 aaKnown RBP6.1□□□□□ -1.43
PRPF39-210ENST00000556718 USP39Q53GS9 565 aaKnown RBP6.1□□□□□ -1.43
PRPF39-210ENST00000556718 HS1BP3Q53T59 392 aa6.1□□□□□ -1.43
PRPF39-210ENST00000556718 AGBL4Q5VU57 503 aa6.1□□□□□ -1.43
PRPF39-210ENST00000556718 SYNPOQ8N3V7 929 aa6.1□□□□□ -1.43
PRPF39-210ENST00000556718 EXTL1Q92935 676 aa6.1□□□□□ -1.43
PRPF39-210ENST00000556718 TMEM260Q9NX78 707 aa6.1□□□□□ -1.43
PRPF39-210ENST00000556718 FAHP16930 419 aa6.09□□□□□ -1.43
PRPF39-210ENST00000556718 TGFB2P61812 414 aa6.09□□□□□ -1.43
PRPF39-210ENST00000556718 PFKPQ01813 784 aa6.09□□□□□ -1.43
PRPF39-210ENST00000556718 TCEA2Q15560 299 aa6.09□□□□□ -1.43
PRPF39-210ENST00000556718 CD276Q5ZPR3 534 aa6.09□□□□□ -1.43
PRPF39-210ENST00000556718 FUKQ8N0W3 1084 aa6.09□□□□□ -1.43
PRPF39-210ENST00000556718 LRRC47Q8N1G4 583 aaKnown RBP6.09□□□□□ -1.43
PRPF39-210ENST00000556718 ZSWIM2Q8NEG5 633 aa6.09□□□□□ -1.43
PRPF39-210ENST00000556718 NEIL1Q96FI4 390 aaPredicted RBP6.09□□□□□ -1.43
PRPF39-210ENST00000556718 FEZ1Q99689 392 aa6.09□□□□□ -1.43
PRPF39-210ENST00000556718 ARHGAP20Q9P2F6 1191 aa6.09□□□□□ -1.43
PRPF39-210ENST00000556718 ZNF202O95125 648 aa6.08□□□□□ -1.44
PRPF39-210ENST00000556718 CHGBP05060 677 aa6.08□□□□□ -1.44
PRPF39-210ENST00000556718 PPP2R2AP63151 447 aa6.08□□□□□ -1.44
PRPF39-210ENST00000556718 ZC3H12BQ5HYM0 836 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms