RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 MRPS27Q92552 414 aaKnown RBP12.64□□□□□ -0.39
FOXN3-212ENST00000556541 SYMPKQ92797 1274 aaKnown RBP12.64□□□□□ -0.39
FOXN3-212ENST00000556541 COPS5Q92905 334 aa12.64□□□□□ -0.39
FOXN3-212ENST00000556541 CHAMP1Q96JM3 812 aa12.64□□□□□ -0.39
FOXN3-212ENST00000556541 FAM167AQ96KS9 214 aa12.64□□□□□ -0.39
FOXN3-212ENST00000556541 EIF2AK1Q9BQI3 630 aaKnown RBP12.64□□□□□ -0.39
FOXN3-212ENST00000556541 CRISPLD2Q9H0B8 497 aa12.64□□□□□ -0.39
FOXN3-212ENST00000556541 CUEDC2Q9H467 287 aa12.64□□□□□ -0.39
FOXN3-212ENST00000556541 SMARCAD1Q9H4L7 1026 aa12.64□□□□□ -0.39
FOXN3-212ENST00000556541 ZSWIM4Q9H7M6 989 aa12.64□□□□□ -0.39
FOXN3-212ENST00000556541 MAGEF1Q9HAY2 307 aa12.64□□□□□ -0.39
FOXN3-212ENST00000556541 FAM13BQ9NYF5 915 aa12.64□□□□□ -0.39
FOXN3-212ENST00000556541 STK17AQ9UEE5 414 aa12.64□□□□□ -0.39
FOXN3-212ENST00000556541 KAT6AQ92794 2004 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 MOXD2PA6NHM9 499 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 DYNC1LI2O43237 492 aaPredicted RBP12.63□□□□□ -0.39
FOXN3-212ENST00000556541 CABYRO75952 493 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 SLITRK3O94933 977 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 F2P00734 622 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 GJB1P08034 283 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 SPATA31C1P0DKV0 1188 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 CCL5P13501 91 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 MCM4P33991 863 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 TCF7P36402 384 aaPredicted RBP12.63□□□□□ -0.39
FOXN3-212ENST00000556541 FSCN1Q16658 493 aaKnown RBP12.63□□□□□ -0.39
FOXN3-212ENST00000556541 NCAPH2Q6IBW4 605 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 CCDC73Q6ZRK6 1079 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 CABP7Q86V35 215 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 ELOA2Q8IYF1 753 aaPredicted RBP12.63□□□□□ -0.39
FOXN3-212ENST00000556541 ARRDC4Q8NCT1 418 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 SH3TC2Q8TF17 1288 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 AFG1LQ8WV93 481 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 GJA10Q969M2 543 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 CALML4Q96GE6 196 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 CLIC6Q96NY7 704 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 KATNAL1Q9BW62 490 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 BCAS3Q9H6U6 928 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 GDPD2Q9HCC8 539 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 XPNPEP3Q9NQH7 507 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 LMBRD1Q9NUN5 540 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 PKD2L1Q9P0L9 805 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 CCDC39Q9UFE4 941 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 OGDHLQ9ULD0 1010 aa12.63□□□□□ -0.39
FOXN3-212ENST00000556541 GOLGA6L4A6NEF3 574 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 DDX39AO00148 427 aaKnown RBP12.62□□□□□ -0.39
FOXN3-212ENST00000556541 LGALS2P05162 132 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 CNGA1P29973 690 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 CCT6AP40227 531 aaKnown RBP12.62□□□□□ -0.39
FOXN3-212ENST00000556541 STAT5BP51692 787 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 TMEM63BQ5T3F8 832 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 GJC2Q5T442 439 aaPredicted RBP12.62□□□□□ -0.39
FOXN3-212ENST00000556541 RNF180Q86T96 592 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 CATSPER3Q86XQ3 398 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 CCDC60Q8IWA6 550 aaPredicted RBP12.62□□□□□ -0.39
FOXN3-212ENST00000556541 ANKLE1Q8NAG6 615 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 SNX29Q8TEQ0 813 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 TIGD1Q96MW7 591 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 NACC1Q96RE7 527 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 PCYT2Q99447 389 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 LXNQ9BS40 222 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 C16orf70Q9BSU1 422 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 UNC93B1Q9H1C4 597 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 AZI2Q9H6S1 392 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 ZNF302Q9NR11 478 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 ANKEF1Q9NU02 776 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 ERAP1Q9NZ08 941 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 DBR1Q9UK59 544 aaKnown RBP12.62□□□□□ -0.39
FOXN3-212ENST00000556541 ZNF215Q9UL58 517 aaPredicted RBP12.62□□□□□ -0.39
FOXN3-212ENST00000556541 SAMM50Q9Y512 469 aa12.62□□□□□ -0.39
FOXN3-212ENST00000556541 COL1A2P08123 1366 aa12.61□□□□□ -0.39
FOXN3-212ENST00000556541 HAS3O00219 553 aa12.61□□□□□ -0.39
FOXN3-212ENST00000556541 MED24O75448 989 aa12.61□□□□□ -0.39
FOXN3-212ENST00000556541 MBD3O95983 291 aa12.61□□□□□ -0.39
FOXN3-212ENST00000556541 PURAQ00577 322 aaKnown RBP12.61□□□□□ -0.39
FOXN3-212ENST00000556541 FAM160A1Q05DH4 1040 aa12.61□□□□□ -0.39
FOXN3-212ENST00000556541 GRB10Q13322 594 aa12.61□□□□□ -0.39
FOXN3-212ENST00000556541 LRRC41Q15345 812 aa12.61□□□□□ -0.39
FOXN3-212ENST00000556541 E2F4Q16254 413 aa12.61□□□□□ -0.39
FOXN3-212ENST00000556541 XKR3Q5GH77 459 aa12.61□□□□□ -0.39
FOXN3-212ENST00000556541 IQUBQ8NA54 791 aa12.61□□□□□ -0.39
FOXN3-212ENST00000556541 ENGASEQ8NFI3 743 aa12.61□□□□□ -0.39
FOXN3-212ENST00000556541 BBXQ8WY36 941 aaPredicted RBP12.61□□□□□ -0.39
FOXN3-212ENST00000556541 DYDC2Q96IM9 177 aa12.61□□□□□ -0.39
FOXN3-212ENST00000556541 EPSTI1Q96J88 318 aa12.61□□□□□ -0.39
FOXN3-212ENST00000556541 PNMA5Q96PV4 448 aa12.61□□□□□ -0.39
FOXN3-212ENST00000556541 NIFKQ9BYG3 293 aaKnown RBP12.61□□□□□ -0.39
FOXN3-212ENST00000556541 MCOLN1Q9GZU1 580 aa12.61□□□□□ -0.39
FOXN3-212ENST00000556541 KCND2Q9NZV8 630 aa12.61□□□□□ -0.39
FOXN3-212ENST00000556541 KCNH3Q9ULD8 1083 aa12.61□□□□□ -0.39
FOXN3-212ENST00000556541 PP2D1A8MPX8 630 aa12.6□□□□□ -0.39
FOXN3-212ENST00000556541 DNM1LO00429 736 aa12.6□□□□□ -0.39
FOXN3-212ENST00000556541 CHMP2AO43633 222 aa12.6□□□□□ -0.39
FOXN3-212ENST00000556541 ZNF862O60290 1169 aa12.6□□□□□ -0.39
FOXN3-212ENST00000556541 PRPF40AO75400 957 aaKnown RBP12.6□□□□□ -0.39
FOXN3-212ENST00000556541 STBD1O95210 358 aa12.6□□□□□ -0.39
FOXN3-212ENST00000556541 SGPL1O95470 568 aa12.6□□□□□ -0.39
FOXN3-212ENST00000556541 MYL1P05976 194 aa12.6□□□□□ -0.39
FOXN3-212ENST00000556541 C6orf222P0C671 652 aaPredicted RBP12.6□□□□□ -0.39
FOXN3-212ENST00000556541 PFKFB1P16118 471 aa12.6□□□□□ -0.39
FOXN3-212ENST00000556541 HOXC8P31273 242 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms